RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
CSNK1D-207ENST00000578194 CCDC180Q9P1Z9 1646 aa27.28■■□□□ 1.96
CSNK1D-207ENST00000578194 ABCC9O60706 1549 aa26.52■■□□□ 1.84
CSNK1D-207ENST00000578194 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
CSNK1D-207ENST00000578194 NACADO15069 1562 aa25.6■■□□□ 1.69
CSNK1D-207ENST00000578194 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
CSNK1D-207ENST00000578194 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
CSNK1D-207ENST00000578194 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
CSNK1D-207ENST00000578194 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
CSNK1D-207ENST00000578194 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
CSNK1D-207ENST00000578194 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
CSNK1D-207ENST00000578194 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
CSNK1D-207ENST00000578194 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
CSNK1D-207ENST00000578194 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
CSNK1D-207ENST00000578194 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
CSNK1D-207ENST00000578194 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
CSNK1D-207ENST00000578194 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
CSNK1D-207ENST00000578194 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
CSNK1D-207ENST00000578194 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
CSNK1D-207ENST00000578194 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
CSNK1D-207ENST00000578194 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
CSNK1D-207ENST00000578194 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
CSNK1D-207ENST00000578194 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
CSNK1D-207ENST00000578194 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
CSNK1D-207ENST00000578194 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
CSNK1D-207ENST00000578194 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
CSNK1D-207ENST00000578194 BAZ1BQ9UIG0 1483 aaKnown RBP23.43■■□□□ 1.34
CSNK1D-207ENST00000578194 WIZO95785 1651 aa23.36■■□□□ 1.33
CSNK1D-207ENST00000578194 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
CSNK1D-207ENST00000578194 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
CSNK1D-207ENST00000578194 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
CSNK1D-207ENST00000578194 NESP48681 1621 aa22.95■■□□□ 1.26
CSNK1D-207ENST00000578194 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
CSNK1D-207ENST00000578194 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
CSNK1D-207ENST00000578194 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
CSNK1D-207ENST00000578194 PDS5BQ9NTI5 1447 aa22.81■■□□□ 1.24
CSNK1D-207ENST00000578194 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
CSNK1D-207ENST00000578194 CFTRP13569 1480 aa22.77■■□□□ 1.24
CSNK1D-207ENST00000578194 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
CSNK1D-207ENST00000578194 PRDM2Q13029 1718 aa22.73■■□□□ 1.23
CSNK1D-207ENST00000578194 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
CSNK1D-207ENST00000578194 FANCD2Q9BXW9 1451 aa22.63■■□□□ 1.21
CSNK1D-207ENST00000578194 CUX2O14529 1486 aa22.62■■□□□ 1.21
CSNK1D-207ENST00000578194 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
CSNK1D-207ENST00000578194 MRC2Q9UBG0 1479 aa22.57■■□□□ 1.2
CSNK1D-207ENST00000578194 WDR62O43379 1518 aa22.48■■□□□ 1.19
CSNK1D-207ENST00000578194 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
CSNK1D-207ENST00000578194 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
CSNK1D-207ENST00000578194 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
CSNK1D-207ENST00000578194 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
CSNK1D-207ENST00000578194 IFT140Q96RY7 1462 aa22.14■■□□□ 1.13
CSNK1D-207ENST00000578194 CUX1P39880 1505 aa22.13■■□□□ 1.13
CSNK1D-207ENST00000578194 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
CSNK1D-207ENST00000578194 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
CSNK1D-207ENST00000578194 TARBP1Q13395 1621 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-207ENST00000578194 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.125e-6■■■■■ 38.2
CSNK1D-207ENST00000578194 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.11
CSNK1D-207ENST00000578194 SOGA1O94964 1423 aa22■■□□□ 1.11
CSNK1D-207ENST00000578194 TOP2BQ02880 1626 aa22■■□□□ 1.11
CSNK1D-207ENST00000578194 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
CSNK1D-207ENST00000578194 SYNJ1O43426 1573 aa21.97■■□□□ 1.11
CSNK1D-207ENST00000578194 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
CSNK1D-207ENST00000578194 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.11
CSNK1D-207ENST00000578194 WDR97A6NE52 1622 aa21.94■■□□□ 1.1
CSNK1D-207ENST00000578194 AQRO60306 1485 aaKnown RBP eCLIP21.86■■□□□ 1.095e-8■■■■■ 42.7
CSNK1D-207ENST00000578194 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
CSNK1D-207ENST00000578194 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-207ENST00000578194 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
CSNK1D-207ENST00000578194 PBRM1Q86U86 1689 aa21.77■■□□□ 1.08
CSNK1D-207ENST00000578194 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
CSNK1D-207ENST00000578194 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
CSNK1D-207ENST00000578194 GAPVD1Q14C86 1478 aa21.76■■□□□ 1.07
CSNK1D-207ENST00000578194 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
CSNK1D-207ENST00000578194 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
CSNK1D-207ENST00000578194 CHD1O14646 1710 aa21.69■■□□□ 1.06
CSNK1D-207ENST00000578194 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
CSNK1D-207ENST00000578194 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
CSNK1D-207ENST00000578194 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
CSNK1D-207ENST00000578194 FBLN2P98095 1184 aa21.61■■□□□ 1.05
CSNK1D-207ENST00000578194 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
CSNK1D-207ENST00000578194 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
CSNK1D-207ENST00000578194 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
CSNK1D-207ENST00000578194 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
CSNK1D-207ENST00000578194 FHAD1B1AJZ9 1412 aa21.52■■□□□ 1.04
CSNK1D-207ENST00000578194 CUL7Q14999 1698 aa21.47■■□□□ 1.03
CSNK1D-207ENST00000578194 GRIN2AQ12879 1464 aa21.46■■□□□ 1.03
CSNK1D-207ENST00000578194 IGF1RP08069 1367 aa21.43■■□□□ 1.02
CSNK1D-207ENST00000578194 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
CSNK1D-207ENST00000578194 NUP160Q12769 1436 aa21.36■■□□□ 1.01
CSNK1D-207ENST00000578194 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
CSNK1D-207ENST00000578194 RIMBP3CA6NJZ7 1639 aa21.34■■□□□ 1.01
CSNK1D-207ENST00000578194 RIMBP3BA6NNM3 1639 aa21.34■■□□□ 1.01
CSNK1D-207ENST00000578194 RIMBP3Q9UFD9 1639 aa21.34■■□□□ 1.01
CSNK1D-207ENST00000578194 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
CSNK1D-207ENST00000578194 CARMIL1Q5VZK9 1371 aa21.33■■□□□ 1
CSNK1D-207ENST00000578194 ARHGEF11O15085 1522 aa21.32■■□□□ 1
CSNK1D-207ENST00000578194 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
CSNK1D-207ENST00000578194 EEA1Q15075 1411 aa21.25■□□□□ 0.99
CSNK1D-207ENST00000578194 RAPGEF2Q9Y4G8 1499 aa21.24■□□□□ 0.99
CSNK1D-207ENST00000578194 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms