RNA–Protein interactions for RNA: ENST00000457424.6

CEP44-204, Transcript of centrosomal protein 44, humanhuman

TSL 2 BASIC

Gene CEP44, Length 3,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP44-204ENST00000457424 NISCHQ9Y2I1 1504 aa17.33■□□□□ 0.36
CEP44-204ENST00000457424 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
CEP44-204ENST00000457424 HRCP23327 699 aa16.53■□□□□ 0.24
CEP44-204ENST00000457424 MYT1Q01538 1121 aa16.42■□□□□ 0.22
CEP44-204ENST00000457424 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
CEP44-204ENST00000457424 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
CEP44-204ENST00000457424 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
CEP44-204ENST00000457424 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
CEP44-204ENST00000457424 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
CEP44-204ENST00000457424 TTBK1Q5TCY1 1321 aaPredicted RBP15.63■□□□□ 0.09
CEP44-204ENST00000457424 CCDC180Q9P1Z9 1646 aa15.63■□□□□ 0.09
CEP44-204ENST00000457424 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
CEP44-204ENST00000457424 CHIC1Q5VXU3 224 aa15.4■□□□□ 0.06
CEP44-204ENST00000457424 TRIM26Q12899 539 aaPredicted RBP15.37■□□□□ 0.05
CEP44-204ENST00000457424 ACIN1Q9UKV3 1341 aaKnown RBP15.33■□□□□ 0.04
CEP44-204ENST00000457424 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
CEP44-204ENST00000457424 NEUROD1Q13562 356 aa15.12■□□□□ 0.01
CEP44-204ENST00000457424 CENPBP07199 599 aaPredicted RBP15.11■□□□□ 0.01
CEP44-204ENST00000457424 SHROOM4Q9ULL8 1493 aa15.09■□□□□ 0.01
CEP44-204ENST00000457424 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
CEP44-204ENST00000457424 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
CEP44-204ENST00000457424 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
CEP44-204ENST00000457424 LOC105371045A0A1W2PR82 267 aa14.82□□□□□ -0.04
CEP44-204ENST00000457424 DIEXFQ68CQ4 756 aaKnown RBP14.76□□□□□ -0.05
CEP44-204ENST00000457424 CLSPNQ9HAW4 1339 aa14.73□□□□□ -0.05
CEP44-204ENST00000457424 ANP32EQ9BTT0 268 aa14.72□□□□□ -0.05
CEP44-204ENST00000457424 FAM9AQ8IZU1 332 aaPredicted RBP14.7□□□□□ -0.06
CEP44-204ENST00000457424 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
CEP44-204ENST00000457424 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
CEP44-204ENST00000457424 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
CEP44-204ENST00000457424 CCER1Q8TC90 406 aaPredicted RBP14.47□□□□□ -0.09
CEP44-204ENST00000457424 ZNF316A6NFI3 1004 aaPredicted RBP14.46□□□□□ -0.09
CEP44-204ENST00000457424 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
CEP44-204ENST00000457424 TSHZ2Q9NRE2 1034 aa14.4□□□□□ -0.1
CEP44-204ENST00000457424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.39□□□□□ -0.11
CEP44-204ENST00000457424 APLP2Q06481 763 aa14.39□□□□□ -0.11
CEP44-204ENST00000457424 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
CEP44-204ENST00000457424 YTHDC1Q96MU7 727 aaKnown RBP14.29□□□□□ -0.12
CEP44-204ENST00000457424 MIER1Q8N108 512 aa14.28□□□□□ -0.12
CEP44-204ENST00000457424 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
CEP44-204ENST00000457424 ABCC9O60706 1549 aa14.25□□□□□ -0.13
CEP44-204ENST00000457424 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
CEP44-204ENST00000457424 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
CEP44-204ENST00000457424 RBM19Q9Y4C8 960 aaKnown RBP14□□□□□ -0.17
CEP44-204ENST00000457424 RSF1Q96T23 1441 aaPredicted RBP14□□□□□ -0.17
CEP44-204ENST00000457424 FANCIQ9NVI1 1328 aa13.98□□□□□ -0.17
CEP44-204ENST00000457424 ERICH6BQ5W0A0 696 aa13.97□□□□□ -0.17
CEP44-204ENST00000457424 MSH5O43196 834 aa13.89□□□□□ -0.19
CEP44-204ENST00000457424 CEP162Q5TB80 1403 aa13.86□□□□□ -0.19
CEP44-204ENST00000457424 TNIKQ9UKE5 1360 aa13.84□□□□□ -0.19
CEP44-204ENST00000457424 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
CEP44-204ENST00000457424 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
CEP44-204ENST00000457424 DEKP35659 375 aaKnown RBP13.79□□□□□ -0.2
CEP44-204ENST00000457424 ANO8Q9HCE9 1232 aaPredicted RBP13.78□□□□□ -0.2
CEP44-204ENST00000457424 FKBP8Q14318 412 aa13.77□□□□□ -0.21
CEP44-204ENST00000457424 NEFLP07196 543 aa13.75□□□□□ -0.21
CEP44-204ENST00000457424 EEA1Q15075 1411 aa13.73□□□□□ -0.21
CEP44-204ENST00000457424 BCANQ96GW7 911 aa13.69□□□□□ -0.22
CEP44-204ENST00000457424 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
CEP44-204ENST00000457424 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
CEP44-204ENST00000457424 DHX57Q6P158 1386 aaKnown RBP13.65□□□□□ -0.22
CEP44-204ENST00000457424 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
CEP44-204ENST00000457424 CDK11AQ9UQ88 783 aaPredicted RBP13.62□□□□□ -0.23
CEP44-204ENST00000457424 GOLGA3Q08378 1498 aa13.6□□□□□ -0.23
CEP44-204ENST00000457424 CCER2I3L3R5 266 aa13.58□□□□□ -0.24
CEP44-204ENST00000457424 CUX2O14529 1486 aa13.58□□□□□ -0.24
CEP44-204ENST00000457424 BAZ1AQ9NRL2 1556 aaPredicted RBP13.56□□□□□ -0.24
CEP44-204ENST00000457424 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
CEP44-204ENST00000457424 VPS8Q8N3P4 1428 aa13.53□□□□□ -0.24
CEP44-204ENST00000457424 NOP58Q9Y2X3 529 aaKnown RBP13.52□□□□□ -0.24
CEP44-204ENST00000457424 NACADO15069 1562 aa13.52□□□□□ -0.25
CEP44-204ENST00000457424 ITGAEP38570 1179 aa13.51□□□□□ -0.25
CEP44-204ENST00000457424 KIF21BO75037 1637 aa13.51□□□□□ -0.25
CEP44-204ENST00000457424 KCNH8Q96L42 1107 aa13.51□□□□□ -0.25
CEP44-204ENST00000457424 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
CEP44-204ENST00000457424 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
CEP44-204ENST00000457424 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
CEP44-204ENST00000457424 SCRIBQ14160 1630 aa13.47□□□□□ -0.25
CEP44-204ENST00000457424 CLIP1P30622 1438 aa13.46□□□□□ -0.26
CEP44-204ENST00000457424 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
CEP44-204ENST00000457424 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CEP44-204ENST00000457424 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
CEP44-204ENST00000457424 SOGA1O94964 1423 aa13.43□□□□□ -0.26
CEP44-204ENST00000457424 WASHC2AQ641Q2 1341 aa13.43□□□□□ -0.26
CEP44-204ENST00000457424 WIZO95785 1651 aa13.42□□□□□ -0.26
CEP44-204ENST00000457424 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
CEP44-204ENST00000457424 PPP4R2Q9NY27 417 aa13.42□□□□□ -0.26
CEP44-204ENST00000457424 PPP1R15AO75807 674 aaPredicted RBP13.41□□□□□ -0.26
CEP44-204ENST00000457424 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
CEP44-204ENST00000457424 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
CEP44-204ENST00000457424 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
CEP44-204ENST00000457424 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
CEP44-204ENST00000457424 WASHC2CQ9Y4E1 1318 aa13.38□□□□□ -0.27
CEP44-204ENST00000457424 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
CEP44-204ENST00000457424 PKNOX2Q96KN3 472 aa13.36□□□□□ -0.27
CEP44-204ENST00000457424 MAPKBP1O60336 1514 aa13.35□□□□□ -0.27
CEP44-204ENST00000457424 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
CEP44-204ENST00000457424 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
CEP44-204ENST00000457424 NBR1Q14596 966 aa13.34□□□□□ -0.27
CEP44-204ENST00000457424 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms