RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 NISCHQ9Y2I1 1504 aa41.33■■■■■ 4.21
CSNK1D-205ENST00000403276 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
CSNK1D-205ENST00000403276 ABCC9O60706 1549 aa36.46■■■■□ 3.43
CSNK1D-205ENST00000403276 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
CSNK1D-205ENST00000403276 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
CSNK1D-205ENST00000403276 NACADO15069 1562 aa34.71■■■■□ 3.15
CSNK1D-205ENST00000403276 MYO15BQ96JP2 1530 aa34.34■■■■□ 3.09
CSNK1D-205ENST00000403276 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
CSNK1D-205ENST00000403276 UNC13AQ9UPW8 1703 aa34.19■■■■□ 3.06
CSNK1D-205ENST00000403276 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
CSNK1D-205ENST00000403276 PABPN1Q86U42 306 aaKnown RBP eCLIP34.06■■■■□ 3.04
CSNK1D-205ENST00000403276 BICRAQ9NZM4 1560 aa33.86■■■■□ 3.01
CSNK1D-205ENST00000403276 DNAJC5BQ9UF47 199 aa33.82■■■■□ 3
CSNK1D-205ENST00000403276 SCRIBQ14160 1630 aa33.69■■■□□ 2.98
CSNK1D-205ENST00000403276 SHROOM4Q9ULL8 1493 aa33.31■■■□□ 2.92
CSNK1D-205ENST00000403276 EIF4G1Q04637 1599 aaKnown RBP32.96■■■□□ 2.87
CSNK1D-205ENST00000403276 CC2D2AQ9P2K1 1620 aa32.95■■■□□ 2.86
CSNK1D-205ENST00000403276 CECR2Q9BXF3 1484 aa32.75■■■□□ 2.83
CSNK1D-205ENST00000403276 SMARCA4P51532 1647 aa32.15■■■□□ 2.74
CSNK1D-205ENST00000403276 NCAPD3P42695 1498 aa32.04■■■□□ 2.72
CSNK1D-205ENST00000403276 ATAD2BQ9ULI0 1458 aa32.04■■■□□ 2.72
CSNK1D-205ENST00000403276 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
CSNK1D-205ENST00000403276 SMARCA2P51531 1590 aa31.95■■■□□ 2.71
CSNK1D-205ENST00000403276 MROH2BQ7Z745 1585 aa31.89■■■□□ 2.7
CSNK1D-205ENST00000403276 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
CSNK1D-205ENST00000403276 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
CSNK1D-205ENST00000403276 BAZ1BQ9UIG0 1483 aaKnown RBP31.76■■■□□ 2.67
CSNK1D-205ENST00000403276 WIZO95785 1651 aa31.57■■■□□ 2.64
CSNK1D-205ENST00000403276 NESP48681 1621 aa31.48■■■□□ 2.63
CSNK1D-205ENST00000403276 ERCC6Q03468 1493 aa31.41■■■□□ 2.62
CSNK1D-205ENST00000403276 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
CSNK1D-205ENST00000403276 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
CSNK1D-205ENST00000403276 CUX2O14529 1486 aa31.14■■■□□ 2.57
CSNK1D-205ENST00000403276 TOP2AP11388 1531 aaKnown RBP31.12■■■□□ 2.57
CSNK1D-205ENST00000403276 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
CSNK1D-205ENST00000403276 KIF21AQ7Z4S6 1674 aa31.1■■■□□ 2.57
CSNK1D-205ENST00000403276 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
CSNK1D-205ENST00000403276 THOC2Q8NI27 1593 aaKnown RBP31.01■■■□□ 2.56
CSNK1D-205ENST00000403276 CFTRP13569 1480 aa30.84■■■□□ 2.53
CSNK1D-205ENST00000403276 CCDC88BA6NC98 1476 aa30.81■■■□□ 2.52
CSNK1D-205ENST00000403276 FANCD2Q9BXW9 1451 aa30.77■■■□□ 2.52
CSNK1D-205ENST00000403276 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
CSNK1D-205ENST00000403276 DNAJC5Q9H3Z4 198 aa30.74■■■□□ 2.51
CSNK1D-205ENST00000403276 CEP164Q9UPV0 1460 aa30.74■■■□□ 2.51
CSNK1D-205ENST00000403276 WDR62O43379 1518 aa30.67■■■□□ 2.5
CSNK1D-205ENST00000403276 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
CSNK1D-205ENST00000403276 URB2Q14146 1524 aaKnown RBP30.51■■■□□ 2.47
CSNK1D-205ENST00000403276 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
CSNK1D-205ENST00000403276 TOPBP1Q92547 1522 aa30.25■■■□□ 2.43
CSNK1D-205ENST00000403276 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
CSNK1D-205ENST00000403276 DNMBPQ6XZF7 1577 aa30.16■■■□□ 2.42
CSNK1D-205ENST00000403276 IFT140Q96RY7 1462 aa30.1■■■□□ 2.41
CSNK1D-205ENST00000403276 ZNF608Q9ULD9 1512 aaPredicted RBP30.06■■■□□ 2.4
CSNK1D-205ENST00000403276 POLA1P09884 1462 aaPredicted RBP29.97■■■□□ 2.39
CSNK1D-205ENST00000403276 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
CSNK1D-205ENST00000403276 CUX1P39880 1505 aa29.92■■■□□ 2.38
CSNK1D-205ENST00000403276 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
CSNK1D-205ENST00000403276 RAD54L2Q9Y4B4 1467 aa29.9■■■□□ 2.38
CSNK1D-205ENST00000403276 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.371e-7■■■■■ 38.4
CSNK1D-205ENST00000403276 FGD5Q6ZNL6 1462 aa29.87■■■□□ 2.37
CSNK1D-205ENST00000403276 SOGA1O94964 1423 aa29.86■■■□□ 2.37
CSNK1D-205ENST00000403276 OSCARQ8IYS5 282 aa29.85■■■□□ 2.37
CSNK1D-205ENST00000403276 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
CSNK1D-205ENST00000403276 CHD1O14646 1710 aa29.65■■■□□ 2.34
CSNK1D-205ENST00000403276 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
CSNK1D-205ENST00000403276 FBLN2P98095 1184 aa29.6■■■□□ 2.33
CSNK1D-205ENST00000403276 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.335e-6■■■■■ 38.2
CSNK1D-205ENST00000403276 SYNJ1O43426 1573 aa29.57■■■□□ 2.32
CSNK1D-205ENST00000403276 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
CSNK1D-205ENST00000403276 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
CSNK1D-205ENST00000403276 TOP2BQ02880 1626 aa29.55■■■□□ 2.32
CSNK1D-205ENST00000403276 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
CSNK1D-205ENST00000403276 ABCA10Q8WWZ4 1543 aa29.52■■■□□ 2.32
CSNK1D-205ENST00000403276 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
CSNK1D-205ENST00000403276 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
CSNK1D-205ENST00000403276 GAPVD1Q14C86 1478 aa29.48■■■□□ 2.31
CSNK1D-205ENST00000403276 ABCA5Q8WWZ7 1642 aa29.45■■■□□ 2.31
CSNK1D-205ENST00000403276 MAGI1Q96QZ7 1491 aaPredicted RBP29.44■■■□□ 2.3
CSNK1D-205ENST00000403276 RIMBP3CA6NJZ7 1639 aa29.44■■■□□ 2.3
CSNK1D-205ENST00000403276 RIMBP3BA6NNM3 1639 aa29.44■■■□□ 2.3
CSNK1D-205ENST00000403276 RIMBP3Q9UFD9 1639 aa29.44■■■□□ 2.3
CSNK1D-205ENST00000403276 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
CSNK1D-205ENST00000403276 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
CSNK1D-205ENST00000403276 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
CSNK1D-205ENST00000403276 CLASP1Q7Z460 1538 aa29.24■■■□□ 2.27
CSNK1D-205ENST00000403276 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
CSNK1D-205ENST00000403276 CYB5RLQ6IPT4 315 aa29.18■■■□□ 2.26
CSNK1D-205ENST00000403276 ERICH3Q5RHP9 1530 aa29.15■■■□□ 2.26
CSNK1D-205ENST00000403276 GRIN2AQ12879 1464 aa29.13■■■□□ 2.25
CSNK1D-205ENST00000403276 FHAD1B1AJZ9 1412 aa29.11■■■□□ 2.25
CSNK1D-205ENST00000403276 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
CSNK1D-205ENST00000403276 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
CSNK1D-205ENST00000403276 NUP160Q12769 1436 aa29■■■□□ 2.23
CSNK1D-205ENST00000403276 KIF27Q86VH2 1401 aa28.97■■■□□ 2.23
CSNK1D-205ENST00000403276 IGF1RP08069 1367 aa28.93■■■□□ 2.22
CSNK1D-205ENST00000403276 ERCC6L2Q5T890 1561 aa28.9■■■□□ 2.22
CSNK1D-205ENST00000403276 SHROOM2Q13796 1616 aa28.84■■■□□ 2.21
CSNK1D-205ENST00000403276 CUL7Q14999 1698 aa28.83■■■□□ 2.21
CSNK1D-205ENST00000403276 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
CSNK1D-205ENST00000403276 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms