RNA–Protein interactions for RNA: ENST00000407982.6

STRBP-203, Transcript of spermatid perinuclear RNA binding protein, humanhuman

TSL 1 (best)

Gene STRBP, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRBP-203ENST00000407982 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
STRBP-203ENST00000407982 HRCP23327 699 aa36.38■■■■□ 3.42
STRBP-203ENST00000407982 PPARGC1BQ86YN6 1023 aaKnown RBP35.97■■■■□ 3.35
STRBP-203ENST00000407982 PCGF6Q9BYE7 350 aa35.74■■■■□ 3.31
STRBP-203ENST00000407982 SUPT5HO00267 1087 aaKnown RBP35.53■■■■□ 3.28
STRBP-203ENST00000407982 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.28
STRBP-203ENST00000407982 PELP1Q8IZL8 1130 aaKnown RBP35.43■■■■□ 3.26
STRBP-203ENST00000407982 MYO15BQ96JP2 1530 aa35.14■■■■□ 3.22
STRBP-203ENST00000407982 CHIC1Q5VXU3 224 aa34.79■■■■□ 3.16
STRBP-203ENST00000407982 SCAF1Q9H7N4 1312 aaKnown RBP34.77■■■■□ 3.16
STRBP-203ENST00000407982 LOC105371045A0A1W2PR82 267 aa34.29■■■■□ 3.08
STRBP-203ENST00000407982 TRIM26Q12899 539 aaPredicted RBP34.2■■■■□ 3.07
STRBP-203ENST00000407982 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
STRBP-203ENST00000407982 MYT1Q01538 1121 aa34.04■■■■□ 3.04
STRBP-203ENST00000407982 ZEB1P37275 1124 aaPredicted RBP33.9■■■■□ 3.02
STRBP-203ENST00000407982 CCDC180Q9P1Z9 1646 aa33.81■■■■□ 3
STRBP-203ENST00000407982 NEUROD1Q13562 356 aa33.72■■■□□ 2.99
STRBP-203ENST00000407982 ACIN1Q9UKV3 1341 aaKnown RBP33.7■■■□□ 2.99
STRBP-203ENST00000407982 GTF3C3Q9Y5Q9 886 aa33.6■■■□□ 2.97
STRBP-203ENST00000407982 DCAF8L2P0C7V8 631 aa33.21■■■□□ 2.91
STRBP-203ENST00000407982 CENPBP07199 599 aaPredicted RBP33.21■■■□□ 2.91
STRBP-203ENST00000407982 ZCCHC6Q5VYS8 1495 aaKnown RBP33.17■■■□□ 2.9
STRBP-203ENST00000407982 EHMT2Q96KQ7 1210 aa33.1■■■□□ 2.89
STRBP-203ENST00000407982 DIEXFQ68CQ4 756 aaKnown RBP33.01■■■□□ 2.87
STRBP-203ENST00000407982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33■■■□□ 2.87
STRBP-203ENST00000407982 FAM9AQ8IZU1 332 aaPredicted RBP32.97■■■□□ 2.87
STRBP-203ENST00000407982 CCER1Q8TC90 406 aaPredicted RBP32.88■■■□□ 2.85
STRBP-203ENST00000407982 YTHDC1Q96MU7 727 aaKnown RBP32.82■■■□□ 2.85
STRBP-203ENST00000407982 TRIM41Q8WV44 630 aa32.62■■■□□ 2.81
STRBP-203ENST00000407982 TTBK1Q5TCY1 1321 aaPredicted RBP32.35■■■□□ 2.77
STRBP-203ENST00000407982 BCL11AQ9H165 835 aa32.24■■■□□ 2.75
STRBP-203ENST00000407982 ZNF316A6NFI3 1004 aaPredicted RBP32.18■■■□□ 2.74
STRBP-203ENST00000407982 MIER1Q8N108 512 aa32.17■■■□□ 2.74
STRBP-203ENST00000407982 ANP32EQ9BTT0 268 aa31.95■■■□□ 2.7
STRBP-203ENST00000407982 SUPT16HQ9Y5B9 1047 aaKnown RBP31.79■■■□□ 2.68
STRBP-203ENST00000407982 CSRNP3Q8WYN3 585 aa31.76■■■□□ 2.67
STRBP-203ENST00000407982 TSHZ2Q9NRE2 1034 aa31.74■■■□□ 2.67
STRBP-203ENST00000407982 RB1CC1Q8TDY2 1594 aa31.66■■■□□ 2.66
STRBP-203ENST00000407982 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
STRBP-203ENST00000407982 ABCC9O60706 1549 aa31.59■■■□□ 2.65
STRBP-203ENST00000407982 HNRNPUL2Q1KMD3 747 aaKnown RBP31.41■■■□□ 2.62
STRBP-203ENST00000407982 BCANQ96GW7 911 aa31.37■■■□□ 2.61
STRBP-203ENST00000407982 CLSPNQ9HAW4 1339 aa31.3■■■□□ 2.6
STRBP-203ENST00000407982 CEP162Q5TB80 1403 aa31.16■■■□□ 2.58
STRBP-203ENST00000407982 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
STRBP-203ENST00000407982 PRKCSHP14314 528 aaPredicted RBP31.11■■■□□ 2.57
STRBP-203ENST00000407982 SCRIBQ14160 1630 aa31.03■■■□□ 2.56
STRBP-203ENST00000407982 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
STRBP-203ENST00000407982 FKBP8Q14318 412 aa30.99■■■□□ 2.55
STRBP-203ENST00000407982 RBM19Q9Y4C8 960 aaKnown RBP30.99■■■□□ 2.55
STRBP-203ENST00000407982 KCNH8Q96L42 1107 aa30.96■■■□□ 2.55
STRBP-203ENST00000407982 ITGAEP38570 1179 aa30.86■■■□□ 2.53
STRBP-203ENST00000407982 MSH5O43196 834 aa30.77■■■□□ 2.52
STRBP-203ENST00000407982 TNIKQ9UKE5 1360 aa30.77■■■□□ 2.52
STRBP-203ENST00000407982 CCDC88BA6NC98 1476 aa30.74■■■□□ 2.51
STRBP-203ENST00000407982 CECR2Q9BXF3 1484 aa30.73■■■□□ 2.51
STRBP-203ENST00000407982 SOGA1O94964 1423 aa30.72■■■□□ 2.51
STRBP-203ENST00000407982 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
STRBP-203ENST00000407982 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
STRBP-203ENST00000407982 NEFLP07196 543 aa30.62■■■□□ 2.49
STRBP-203ENST00000407982 ERICH6Q7L0X2 663 aa30.6■■■□□ 2.49
STRBP-203ENST00000407982 RANGAP1P46060 587 aaPredicted RBP30.58■■■□□ 2.49
STRBP-203ENST00000407982 WIZO95785 1651 aa30.57■■■□□ 2.48
STRBP-203ENST00000407982 RUSC2Q8N2Y8 1516 aa30.54■■■□□ 2.48
STRBP-203ENST00000407982 APLP2Q06481 763 aa30.52■■■□□ 2.48
STRBP-203ENST00000407982 DHX57Q6P158 1386 aaKnown RBP30.47■■■□□ 2.47
STRBP-203ENST00000407982 TRIM52Q96A61 297 aa30.46■■■□□ 2.47
STRBP-203ENST00000407982 EIF4G1Q04637 1599 aaKnown RBP30.38■■■□□ 2.45
STRBP-203ENST00000407982 DDX10Q13206 875 aaKnown RBP30.35■■■□□ 2.45
STRBP-203ENST00000407982 DEKP35659 375 aaKnown RBP30.34■■■□□ 2.45
STRBP-203ENST00000407982 GOLGA3Q08378 1498 aa30.34■■■□□ 2.45
STRBP-203ENST00000407982 ANO8Q9HCE9 1232 aaPredicted RBP30.33■■■□□ 2.45
STRBP-203ENST00000407982 IRX6P78412 446 aaPredicted RBP30.26■■■□□ 2.44
STRBP-203ENST00000407982 CLIP1P30622 1438 aa30.25■■■□□ 2.43
STRBP-203ENST00000407982 FANCIQ9NVI1 1328 aa30.23■■■□□ 2.43
STRBP-203ENST00000407982 CDK11AQ9UQ88 783 aaPredicted RBP30.19■■■□□ 2.42
STRBP-203ENST00000407982 VPS8Q8N3P4 1428 aa30.16■■■□□ 2.42
STRBP-203ENST00000407982 EEA1Q15075 1411 aa30.15■■■□□ 2.42
STRBP-203ENST00000407982 HIRIP3Q9BW71 556 aaPredicted RBP30.14■■■□□ 2.41
STRBP-203ENST00000407982 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
STRBP-203ENST00000407982 NBR1Q14596 966 aa30.12■■■□□ 2.41
STRBP-203ENST00000407982 SALL2Q9Y467 1007 aaPredicted RBP30.01■■■□□ 2.39
STRBP-203ENST00000407982 MYT1LQ9UL68 1186 aa29.98■■■□□ 2.39
STRBP-203ENST00000407982 CCDC136Q96JN2 1154 aa29.97■■■□□ 2.39
STRBP-203ENST00000407982 KANK4Q5T7N3 995 aaPredicted RBP29.95■■■□□ 2.39
STRBP-203ENST00000407982 NACADO15069 1562 aa29.95■■■□□ 2.38
STRBP-203ENST00000407982 CEP164Q9UPV0 1460 aa29.94■■■□□ 2.38
STRBP-203ENST00000407982 ANP32CO43423 234 aa29.93■■■□□ 2.38
STRBP-203ENST00000407982 PPP1R15AO75807 674 aaPredicted RBP29.88■■■□□ 2.37
STRBP-203ENST00000407982 RTN4Q9NQC3 1192 aaKnown RBP29.84■■■□□ 2.37
STRBP-203ENST00000407982 SIN3AQ96ST3 1273 aa29.84■■■□□ 2.37
STRBP-203ENST00000407982 HNRNPUQ00839 825 aaKnown RBP eCLIP29.83■■■□□ 2.372e-12■□□□□ 11
STRBP-203ENST00000407982 KIF21BO75037 1637 aa29.81■■■□□ 2.36
STRBP-203ENST00000407982 CCER2I3L3R5 266 aa29.81■■■□□ 2.36
STRBP-203ENST00000407982 PAK3O75914 559 aaPredicted RBP29.81■■■□□ 2.36
STRBP-203ENST00000407982 RAPGEF2Q9Y4G8 1499 aa29.79■■■□□ 2.36
STRBP-203ENST00000407982 NOP58Q9Y2X3 529 aaKnown RBP29.77■■■□□ 2.36
STRBP-203ENST00000407982 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
STRBP-203ENST00000407982 TOP2AP11388 1531 aaKnown RBP29.75■■■□□ 2.35
STRBP-203ENST00000407982 WDR97A6NE52 1622 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms