RNA–Protein interactions for RNA: ENST00000542302.6

ERC1-212, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 5

Gene ERC1, Length 4,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-212ENST00000542302 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
ERC1-212ENST00000542302 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
ERC1-212ENST00000542302 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
ERC1-212ENST00000542302 SUPT5HO00267 1087 aaKnown RBP26.43■■□□□ 1.82
ERC1-212ENST00000542302 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
ERC1-212ENST00000542302 FAM9AQ8IZU1 332 aaPredicted RBP24.79■■□□□ 1.56
ERC1-212ENST00000542302 ABCC9O60706 1549 aa24.51■■□□□ 1.51
ERC1-212ENST00000542302 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
ERC1-212ENST00000542302 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
ERC1-212ENST00000542302 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
ERC1-212ENST00000542302 TTBK1Q5TCY1 1321 aaPredicted RBP24.24■■□□□ 1.47
ERC1-212ENST00000542302 LOC105371045A0A1W2PR82 267 aa24.24■■□□□ 1.47
ERC1-212ENST00000542302 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
ERC1-212ENST00000542302 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
ERC1-212ENST00000542302 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
ERC1-212ENST00000542302 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
ERC1-212ENST00000542302 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
ERC1-212ENST00000542302 SCRIBQ14160 1630 aa23.75■■□□□ 1.39
ERC1-212ENST00000542302 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
ERC1-212ENST00000542302 APLP2Q06481 763 aa23.37■■□□□ 1.33
ERC1-212ENST00000542302 MYO15BQ96JP2 1530 aa23.31■■□□□ 1.32
ERC1-212ENST00000542302 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
ERC1-212ENST00000542302 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
ERC1-212ENST00000542302 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
ERC1-212ENST00000542302 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
ERC1-212ENST00000542302 HRCP23327 699 aa23.14■■□□□ 1.3
ERC1-212ENST00000542302 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
ERC1-212ENST00000542302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.94■■□□□ 1.26
ERC1-212ENST00000542302 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
ERC1-212ENST00000542302 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
ERC1-212ENST00000542302 ITGAEP38570 1179 aa22.88■■□□□ 1.25
ERC1-212ENST00000542302 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
ERC1-212ENST00000542302 NACADO15069 1562 aa22.83■■□□□ 1.24
ERC1-212ENST00000542302 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
ERC1-212ENST00000542302 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
ERC1-212ENST00000542302 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.22
ERC1-212ENST00000542302 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
ERC1-212ENST00000542302 YTHDC1Q96MU7 727 aaKnown RBP22.48■■□□□ 1.19
ERC1-212ENST00000542302 WIZO95785 1651 aa22.46■■□□□ 1.19
ERC1-212ENST00000542302 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
ERC1-212ENST00000542302 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
ERC1-212ENST00000542302 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
ERC1-212ENST00000542302 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
ERC1-212ENST00000542302 SOGA1O94964 1423 aa22.3■■□□□ 1.16
ERC1-212ENST00000542302 FAM50AQ14320 339 aaKnown RBP22.28■■□□□ 1.16
ERC1-212ENST00000542302 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
ERC1-212ENST00000542302 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
ERC1-212ENST00000542302 FBLN2P98095 1184 aa22.21■■□□□ 1.15
ERC1-212ENST00000542302 CEP162Q5TB80 1403 aa22.11■■□□□ 1.13
ERC1-212ENST00000542302 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.12
ERC1-212ENST00000542302 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
ERC1-212ENST00000542302 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
ERC1-212ENST00000542302 CLIP1P30622 1438 aa22.01■■□□□ 1.11
ERC1-212ENST00000542302 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
ERC1-212ENST00000542302 CENPBP07199 599 aaPredicted RBP22■■□□□ 1.11
ERC1-212ENST00000542302 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
ERC1-212ENST00000542302 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
ERC1-212ENST00000542302 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.1
ERC1-212ENST00000542302 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
ERC1-212ENST00000542302 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
ERC1-212ENST00000542302 POLR3GLQ9BT43 218 aa21.84■■□□□ 1.09
ERC1-212ENST00000542302 TRIM52Q96A61 297 aa21.83■■□□□ 1.08
ERC1-212ENST00000542302 EEA1Q15075 1411 aa21.76■■□□□ 1.07
ERC1-212ENST00000542302 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
ERC1-212ENST00000542302 MYT1LQ9UL68 1186 aa21.74■■□□□ 1.07
ERC1-212ENST00000542302 ZNF316A6NFI3 1004 aaPredicted RBP21.73■■□□□ 1.07
ERC1-212ENST00000542302 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
ERC1-212ENST00000542302 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
ERC1-212ENST00000542302 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
ERC1-212ENST00000542302 ZNF777Q9ULD5 760 aaPredicted RBP21.7■■□□□ 1.06
ERC1-212ENST00000542302 KANK4Q5T7N3 995 aaPredicted RBP21.69■■□□□ 1.06
ERC1-212ENST00000542302 CUX2O14529 1486 aa21.68■■□□□ 1.06
ERC1-212ENST00000542302 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
ERC1-212ENST00000542302 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
ERC1-212ENST00000542302 ZNF326Q5BKZ1 582 aaKnown RBP21.6■■□□□ 1.05
ERC1-212ENST00000542302 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.04
ERC1-212ENST00000542302 CARMIL1Q5VZK9 1371 aa21.56■■□□□ 1.04
ERC1-212ENST00000542302 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
ERC1-212ENST00000542302 BICRAQ9NZM4 1560 aa21.53■■□□□ 1.04
ERC1-212ENST00000542302 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
ERC1-212ENST00000542302 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
ERC1-212ENST00000542302 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
ERC1-212ENST00000542302 MTUS2Q5JR59 1369 aa21.47■■□□□ 1.03
ERC1-212ENST00000542302 RRP7BPQ9NSQ0 103 aa21.47■■□□□ 1.03
ERC1-212ENST00000542302 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
ERC1-212ENST00000542302 MIER1Q8N108 512 aa21.42■■□□□ 1.02
ERC1-212ENST00000542302 VPS8Q8N3P4 1428 aa21.42■■□□□ 1.02
ERC1-212ENST00000542302 SIN3AQ96ST3 1273 aa21.4■■□□□ 1.02
ERC1-212ENST00000542302 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
ERC1-212ENST00000542302 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
ERC1-212ENST00000542302 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
ERC1-212ENST00000542302 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1.01
ERC1-212ENST00000542302 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
ERC1-212ENST00000542302 NCAPD3P42695 1498 aa21.3■■□□□ 1
ERC1-212ENST00000542302 BCANQ96GW7 911 aa21.3■■□□□ 1
ERC1-212ENST00000542302 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
ERC1-212ENST00000542302 NESP48681 1621 aa21.28■■□□□ 1
ERC1-212ENST00000542302 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
ERC1-212ENST00000542302 FANCD2Q9BXW9 1451 aa21.27■□□□□ 0.99
ERC1-212ENST00000542302 NEFLP07196 543 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms