RNA–Protein interactions for RNA: ENST00000521395.5

PTK2-232, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-232ENST00000521395 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
PTK2-232ENST00000521395 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
PTK2-232ENST00000521395 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
PTK2-232ENST00000521395 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
PTK2-232ENST00000521395 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
PTK2-232ENST00000521395 ABCC9O60706 1549 aa16.49■□□□□ 0.23
PTK2-232ENST00000521395 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
PTK2-232ENST00000521395 RB1CC1Q8TDY2 1594 aa15.76■□□□□ 0.11
PTK2-232ENST00000521395 DCAF8L2P0C7V8 631 aa15.74■□□□□ 0.11
PTK2-232ENST00000521395 NACADO15069 1562 aa15.73■□□□□ 0.11
PTK2-232ENST00000521395 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
PTK2-232ENST00000521395 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.09
PTK2-232ENST00000521395 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
PTK2-232ENST00000521395 DCAF1Q9Y4B6 1507 aa15.54■□□□□ 0.08
PTK2-232ENST00000521395 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
PTK2-232ENST00000521395 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
PTK2-232ENST00000521395 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTK2-232ENST00000521395 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
PTK2-232ENST00000521395 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
PTK2-232ENST00000521395 SHROOM4Q9ULL8 1493 aa15.04■□□□□ -0
PTK2-232ENST00000521395 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
PTK2-232ENST00000521395 CC2D2AQ9P2K1 1620 aa14.91□□□□□ -0.02
PTK2-232ENST00000521395 FOXD1Q16676 465 aa14.9□□□□□ -0.02
PTK2-232ENST00000521395 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
PTK2-232ENST00000521395 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
PTK2-232ENST00000521395 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
PTK2-232ENST00000521395 BAZ1AQ9NRL2 1556 aaPredicted RBP14.58□□□□□ -0.08
PTK2-232ENST00000521395 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
PTK2-232ENST00000521395 ADRA2BP18089 450 aa14.56□□□□□ -0.08
PTK2-232ENST00000521395 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
PTK2-232ENST00000521395 NCAPD3P42695 1498 aa14.52□□□□□ -0.08
PTK2-232ENST00000521395 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
PTK2-232ENST00000521395 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
PTK2-232ENST00000521395 WIZO95785 1651 aa14.47□□□□□ -0.09
PTK2-232ENST00000521395 HMGXB3Q12766 1538 aa14.46□□□□□ -0.09
PTK2-232ENST00000521395 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
PTK2-232ENST00000521395 RSF1Q96T23 1441 aaPredicted RBP14.38□□□□□ -0.11
PTK2-232ENST00000521395 NESP48681 1621 aa14.31□□□□□ -0.12
PTK2-232ENST00000521395 TOP2AP11388 1531 aaKnown RBP14.22□□□□□ -0.13
PTK2-232ENST00000521395 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
PTK2-232ENST00000521395 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
PTK2-232ENST00000521395 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
PTK2-232ENST00000521395 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
PTK2-232ENST00000521395 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
PTK2-232ENST00000521395 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
PTK2-232ENST00000521395 THOC2Q8NI27 1593 aaKnown RBP14.07□□□□□ -0.16
PTK2-232ENST00000521395 CFTRP13569 1480 aa14.03□□□□□ -0.16
PTK2-232ENST00000521395 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
PTK2-232ENST00000521395 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
PTK2-232ENST00000521395 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
PTK2-232ENST00000521395 CUX2O14529 1486 aa13.97□□□□□ -0.17
PTK2-232ENST00000521395 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
PTK2-232ENST00000521395 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
PTK2-232ENST00000521395 MRC2Q9UBG0 1479 aa13.92□□□□□ -0.18
PTK2-232ENST00000521395 WDR62O43379 1518 aa13.9□□□□□ -0.19
PTK2-232ENST00000521395 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
PTK2-232ENST00000521395 TOPBP1Q92547 1522 aa13.76□□□□□ -0.21
PTK2-232ENST00000521395 DNMBPQ6XZF7 1577 aa13.72□□□□□ -0.21
PTK2-232ENST00000521395 KCNA4P22459 653 aa13.69□□□□□ -0.22
PTK2-232ENST00000521395 CUX1P39880 1505 aa13.69□□□□□ -0.22
PTK2-232ENST00000521395 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
PTK2-232ENST00000521395 MSH5O43196 834 aa13.67□□□□□ -0.22
PTK2-232ENST00000521395 ZNF608Q9ULD9 1512 aaPredicted RBP13.67□□□□□ -0.22
PTK2-232ENST00000521395 TARBP1Q13395 1621 aaKnown RBP13.65□□□□□ -0.22
PTK2-232ENST00000521395 POLA1P09884 1462 aaPredicted RBP13.65□□□□□ -0.22
PTK2-232ENST00000521395 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
PTK2-232ENST00000521395 RAD54L2Q9Y4B4 1467 aa13.62□□□□□ -0.23
PTK2-232ENST00000521395 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
PTK2-232ENST00000521395 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
PTK2-232ENST00000521395 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
PTK2-232ENST00000521395 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
PTK2-232ENST00000521395 SYNJ1O43426 1573 aa13.58□□□□□ -0.23
PTK2-232ENST00000521395 AQRO60306 1485 aaKnown RBP eCLIP13.56□□□□□ -0.243e-6■■■■□ 24.7
PTK2-232ENST00000521395 WDR97A6NE52 1622 aa13.56□□□□□ -0.24
PTK2-232ENST00000521395 SOGA1O94964 1423 aa13.55□□□□□ -0.24
PTK2-232ENST00000521395 BIVM-ERCC5R4GMW8 1640 aa13.54□□□□□ -0.24
PTK2-232ENST00000521395 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
PTK2-232ENST00000521395 TDRD9Q8NDG6 1382 aaKnown RBP13.52□□□□□ -0.25
PTK2-232ENST00000521395 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
PTK2-232ENST00000521395 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
PTK2-232ENST00000521395 CHD1O14646 1710 aa13.46□□□□□ -0.25
PTK2-232ENST00000521395 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
PTK2-232ENST00000521395 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
PTK2-232ENST00000521395 PBRM1Q86U86 1689 aa13.44□□□□□ -0.26
PTK2-232ENST00000521395 SNAPC4Q5SXM2 1469 aa13.42□□□□□ -0.26
PTK2-232ENST00000521395 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
PTK2-232ENST00000521395 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
PTK2-232ENST00000521395 GRIN2BQ13224 1484 aa13.38□□□□□ -0.27
PTK2-232ENST00000521395 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
PTK2-232ENST00000521395 FBLN2P98095 1184 aa13.33□□□□□ -0.28
PTK2-232ENST00000521395 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
PTK2-232ENST00000521395 ADAMTS12P58397 1594 aa13.31□□□□□ -0.28
PTK2-232ENST00000521395 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
PTK2-232ENST00000521395 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
PTK2-232ENST00000521395 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
PTK2-232ENST00000521395 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
PTK2-232ENST00000521395 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
PTK2-232ENST00000521395 ERICH3Q5RHP9 1530 aa13.26□□□□□ -0.29
PTK2-232ENST00000521395 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
PTK2-232ENST00000521395 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms