RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 NISCHQ9Y2I1 1504 aa41.62■■■■■ 4.25
CSNK1D-204ENST00000398519 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
CSNK1D-204ENST00000398519 ABCC9O60706 1549 aa35.7■■■■□ 3.31
CSNK1D-204ENST00000398519 ZCCHC6Q5VYS8 1495 aaKnown RBP34.77■■■■□ 3.16
CSNK1D-204ENST00000398519 DCAF8L2P0C7V8 631 aa34.57■■■■□ 3.13
CSNK1D-204ENST00000398519 NACADO15069 1562 aa34.54■■■■□ 3.12
CSNK1D-204ENST00000398519 RB1CC1Q8TDY2 1594 aa34.49■■■■□ 3.11
CSNK1D-204ENST00000398519 MYO15BQ96JP2 1530 aa34.46■■■■□ 3.11
CSNK1D-204ENST00000398519 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.11
CSNK1D-204ENST00000398519 UNC13AQ9UPW8 1703 aa33.76■■■□□ 2.99
CSNK1D-204ENST00000398519 SCRIBQ14160 1630 aa33.68■■■□□ 2.98
CSNK1D-204ENST00000398519 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
CSNK1D-204ENST00000398519 PABPN1Q86U42 306 aaKnown RBP eCLIP33.41■■■□□ 2.943e-7■■■□□ 17.8
CSNK1D-204ENST00000398519 SHROOM4Q9ULL8 1493 aa33.11■■■□□ 2.89
CSNK1D-204ENST00000398519 EIF4G1Q04637 1599 aaKnown RBP32.54■■■□□ 2.8
CSNK1D-204ENST00000398519 DNAJC5BQ9UF47 199 aa32.44■■■□□ 2.78
CSNK1D-204ENST00000398519 CECR2Q9BXF3 1484 aa32.41■■■□□ 2.78
CSNK1D-204ENST00000398519 CC2D2AQ9P2K1 1620 aa32.32■■■□□ 2.77
CSNK1D-204ENST00000398519 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
CSNK1D-204ENST00000398519 SMARCA4P51532 1647 aa32.23■■■□□ 2.75
CSNK1D-204ENST00000398519 MROH2BQ7Z745 1585 aa32.1■■■□□ 2.73
CSNK1D-204ENST00000398519 ATAD2BQ9ULI0 1458 aa31.95■■■□□ 2.71
CSNK1D-204ENST00000398519 SMARCA2P51531 1590 aa31.92■■■□□ 2.7
CSNK1D-204ENST00000398519 PEG3Q9GZU2 1588 aa31.91■■■□□ 2.7
CSNK1D-204ENST00000398519 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
CSNK1D-204ENST00000398519 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
CSNK1D-204ENST00000398519 WIZO95785 1651 aa31.78■■■□□ 2.68
CSNK1D-204ENST00000398519 HMGXB3Q12766 1538 aa31.76■■■□□ 2.67
CSNK1D-204ENST00000398519 BAZ1BQ9UIG0 1483 aaKnown RBP31.71■■■□□ 2.67
CSNK1D-204ENST00000398519 TOP2AP11388 1531 aaKnown RBP31.45■■■□□ 2.63
CSNK1D-204ENST00000398519 SUPT5HO00267 1087 aaKnown RBP31.3■■■□□ 2.6
CSNK1D-204ENST00000398519 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
CSNK1D-204ENST00000398519 NESP48681 1621 aa31.02■■■□□ 2.56
CSNK1D-204ENST00000398519 LAMC3Q9Y6N6 1575 aa30.97■■■□□ 2.55
CSNK1D-204ENST00000398519 CADPSQ9ULU8 1353 aa30.95■■■□□ 2.55
CSNK1D-204ENST00000398519 CFTRP13569 1480 aa30.86■■■□□ 2.53
CSNK1D-204ENST00000398519 PDS5BQ9NTI5 1447 aa30.73■■■□□ 2.51
CSNK1D-204ENST00000398519 ERCC6Q03468 1493 aa30.72■■■□□ 2.51
CSNK1D-204ENST00000398519 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
CSNK1D-204ENST00000398519 KIF21AQ7Z4S6 1674 aa30.67■■■□□ 2.5
CSNK1D-204ENST00000398519 FANCD2Q9BXW9 1451 aa30.61■■■□□ 2.49
CSNK1D-204ENST00000398519 CEP164Q9UPV0 1460 aa30.53■■■□□ 2.48
CSNK1D-204ENST00000398519 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
CSNK1D-204ENST00000398519 MRC2Q9UBG0 1479 aa30.42■■■□□ 2.46
CSNK1D-204ENST00000398519 WDR62O43379 1518 aa30.32■■■□□ 2.44
CSNK1D-204ENST00000398519 URB2Q14146 1524 aaKnown RBP30.3■■■□□ 2.44
CSNK1D-204ENST00000398519 CUX2O14529 1486 aa30.26■■■□□ 2.44
CSNK1D-204ENST00000398519 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
CSNK1D-204ENST00000398519 DNMBPQ6XZF7 1577 aa30.16■■■□□ 2.42
CSNK1D-204ENST00000398519 ABCC8Q09428 1581 aa30.15■■■□□ 2.42
CSNK1D-204ENST00000398519 CUX1P39880 1505 aa30.09■■■□□ 2.41
CSNK1D-204ENST00000398519 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.43e-6■■■■■ 43
CSNK1D-204ENST00000398519 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
CSNK1D-204ENST00000398519 POLA1P09884 1462 aaPredicted RBP29.94■■■□□ 2.38
CSNK1D-204ENST00000398519 TOP2BQ02880 1626 aa29.93■■■□□ 2.38
CSNK1D-204ENST00000398519 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
CSNK1D-204ENST00000398519 FGD5Q6ZNL6 1462 aa29.92■■■□□ 2.38
CSNK1D-204ENST00000398519 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
CSNK1D-204ENST00000398519 TARBP1Q13395 1621 aaKnown RBP29.83■■■□□ 2.37
CSNK1D-204ENST00000398519 RAD54L2Q9Y4B4 1467 aa29.81■■■□□ 2.36
CSNK1D-204ENST00000398519 SOGA1O94964 1423 aa29.8■■■□□ 2.36
CSNK1D-204ENST00000398519 ZNF608Q9ULD9 1512 aaPredicted RBP29.74■■■□□ 2.35
CSNK1D-204ENST00000398519 WDR97A6NE52 1622 aa29.69■■■□□ 2.34
CSNK1D-204ENST00000398519 EIF4G3O43432 1585 aaKnown RBP29.65■■■□□ 2.34
CSNK1D-204ENST00000398519 ABCA10Q8WWZ4 1543 aa29.64■■■□□ 2.34
CSNK1D-204ENST00000398519 AQRO60306 1485 aaKnown RBP eCLIP29.6■■■□□ 2.331e-7■■■■■ 36.9
CSNK1D-204ENST00000398519 TDRD9Q8NDG6 1382 aaKnown RBP29.6■■■□□ 2.33
CSNK1D-204ENST00000398519 TRIM41Q8WV44 630 aa29.52■■■□□ 2.32
CSNK1D-204ENST00000398519 ABCA5Q8WWZ7 1642 aa29.52■■■□□ 2.32
CSNK1D-204ENST00000398519 GAPVD1Q14C86 1478 aa29.47■■■□□ 2.31
CSNK1D-204ENST00000398519 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
CSNK1D-204ENST00000398519 PBRM1Q86U86 1689 aa29.42■■■□□ 2.3
CSNK1D-204ENST00000398519 GRIN2BQ13224 1484 aa29.41■■■□□ 2.3
CSNK1D-204ENST00000398519 KIF27Q86VH2 1401 aa29.34■■■□□ 2.29
CSNK1D-204ENST00000398519 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
CSNK1D-204ENST00000398519 MAGI1Q96QZ7 1491 aaPredicted RBP29.3■■■□□ 2.28
CSNK1D-204ENST00000398519 ERICH3Q5RHP9 1530 aa29.29■■■□□ 2.28
CSNK1D-204ENST00000398519 RUSC2Q8N2Y8 1516 aa29.24■■■□□ 2.27
CSNK1D-204ENST00000398519 ADAMTS12P58397 1594 aa29.21■■■□□ 2.27
CSNK1D-204ENST00000398519 CHD1O14646 1710 aa29.19■■■□□ 2.26
CSNK1D-204ENST00000398519 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
CSNK1D-204ENST00000398519 IGF1RP08069 1367 aa29.19■■■□□ 2.26
CSNK1D-204ENST00000398519 FHAD1B1AJZ9 1412 aa29.14■■■□□ 2.26
CSNK1D-204ENST00000398519 FBLN2P98095 1184 aa29.13■■■□□ 2.25
CSNK1D-204ENST00000398519 CHMP7Q8WUX9 453 aaPredicted RBP29.11■■■□□ 2.25
CSNK1D-204ENST00000398519 CUL7Q14999 1698 aa29.11■■■□□ 2.25
CSNK1D-204ENST00000398519 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
CSNK1D-204ENST00000398519 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
CSNK1D-204ENST00000398519 EEA1Q15075 1411 aa29.02■■■□□ 2.24
CSNK1D-204ENST00000398519 CARMIL1Q5VZK9 1371 aa29.01■■■□□ 2.23
CSNK1D-204ENST00000398519 FAM9AQ8IZU1 332 aaPredicted RBP28.92■■■□□ 2.22
CSNK1D-204ENST00000398519 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
CSNK1D-204ENST00000398519 CEP170Q5SW79 1584 aa28.91■■■□□ 2.22
CSNK1D-204ENST00000398519 NUP160Q12769 1436 aa28.91■■■□□ 2.22
CSNK1D-204ENST00000398519 PRXQ9BXM0 1461 aa28.9■■■□□ 2.22
CSNK1D-204ENST00000398519 RAPGEF2Q9Y4G8 1499 aa28.89■■■□□ 2.22
CSNK1D-204ENST00000398519 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.21
CSNK1D-204ENST00000398519 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
CSNK1D-204ENST00000398519 KIF21BO75037 1637 aa28.73■■■□□ 2.19
CSNK1D-204ENST00000398519 KIAA0586Q9BVV6 1533 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms