RNA–Protein interactions for RNA: ENST00000545948.5

ERC1-218, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best)

Gene ERC1, Length 2,881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-218ENST00000545948 NISCHQ9Y2I1 1504 aa19.12■□□□□ 0.65
ERC1-218ENST00000545948 ABCC9O60706 1549 aa16.89■□□□□ 0.29
ERC1-218ENST00000545948 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.28
ERC1-218ENST00000545948 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
ERC1-218ENST00000545948 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
ERC1-218ENST00000545948 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
ERC1-218ENST00000545948 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
ERC1-218ENST00000545948 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
ERC1-218ENST00000545948 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
ERC1-218ENST00000545948 HRCP23327 699 aa15.93■□□□□ 0.14
ERC1-218ENST00000545948 NACADO15069 1562 aa15.93■□□□□ 0.14
ERC1-218ENST00000545948 MYO15BQ96JP2 1530 aa15.91■□□□□ 0.14
ERC1-218ENST00000545948 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
ERC1-218ENST00000545948 DCAF1Q9Y4B6 1507 aa15.76■□□□□ 0.11
ERC1-218ENST00000545948 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
ERC1-218ENST00000545948 PCGF6Q9BYE7 350 aa15.67■□□□□ 0.1
ERC1-218ENST00000545948 DCAF8L2P0C7V8 631 aa15.65■□□□□ 0.1
ERC1-218ENST00000545948 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
ERC1-218ENST00000545948 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
ERC1-218ENST00000545948 LOC105371045A0A1W2PR82 267 aa15.41■□□□□ 0.06
ERC1-218ENST00000545948 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
ERC1-218ENST00000545948 TRIM26Q12899 539 aaPredicted RBP15.4■□□□□ 0.06
ERC1-218ENST00000545948 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
ERC1-218ENST00000545948 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
ERC1-218ENST00000545948 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
ERC1-218ENST00000545948 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
ERC1-218ENST00000545948 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
ERC1-218ENST00000545948 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
ERC1-218ENST00000545948 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
ERC1-218ENST00000545948 CUX2O14529 1486 aa15.02■□□□□ -0
ERC1-218ENST00000545948 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
ERC1-218ENST00000545948 FAM9AQ8IZU1 332 aaPredicted RBP14.92□□□□□ -0.02
ERC1-218ENST00000545948 MROH2BQ7Z745 1585 aa14.84□□□□□ -0.03
ERC1-218ENST00000545948 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
ERC1-218ENST00000545948 WIZO95785 1651 aa14.77□□□□□ -0.05
ERC1-218ENST00000545948 BAZ1AQ9NRL2 1556 aaPredicted RBP14.76□□□□□ -0.05
ERC1-218ENST00000545948 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
ERC1-218ENST00000545948 CCER1Q8TC90 406 aaPredicted RBP14.67□□□□□ -0.06
ERC1-218ENST00000545948 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
ERC1-218ENST00000545948 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
ERC1-218ENST00000545948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
ERC1-218ENST00000545948 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
ERC1-218ENST00000545948 ACIN1Q9UKV3 1341 aaKnown RBP14.62□□□□□ -0.07
ERC1-218ENST00000545948 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
ERC1-218ENST00000545948 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
ERC1-218ENST00000545948 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
ERC1-218ENST00000545948 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
ERC1-218ENST00000545948 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
ERC1-218ENST00000545948 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
ERC1-218ENST00000545948 TNIKQ9UKE5 1360 aa14.54□□□□□ -0.08
ERC1-218ENST00000545948 EEA1Q15075 1411 aa14.53□□□□□ -0.08
ERC1-218ENST00000545948 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
ERC1-218ENST00000545948 NEUROD1Q13562 356 aa14.52□□□□□ -0.08
ERC1-218ENST00000545948 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
ERC1-218ENST00000545948 SMARCA4P51532 1647 aa14.5□□□□□ -0.09
ERC1-218ENST00000545948 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
ERC1-218ENST00000545948 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
ERC1-218ENST00000545948 LAMC3Q9Y6N6 1575 aa14.44□□□□□ -0.1
ERC1-218ENST00000545948 SOGA1O94964 1423 aa14.44□□□□□ -0.1
ERC1-218ENST00000545948 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
ERC1-218ENST00000545948 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
ERC1-218ENST00000545948 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
ERC1-218ENST00000545948 NESP48681 1621 aa14.4□□□□□ -0.1
ERC1-218ENST00000545948 GOLGA3Q08378 1498 aa14.4□□□□□ -0.1
ERC1-218ENST00000545948 ZNF316A6NFI3 1004 aaPredicted RBP14.39□□□□□ -0.11
ERC1-218ENST00000545948 KIF21AQ7Z4S6 1674 aa14.35□□□□□ -0.11
ERC1-218ENST00000545948 UBTFP17480 764 aaKnown RBP14.35□□□□□ -0.11
ERC1-218ENST00000545948 MYT1Q01538 1121 aa14.35□□□□□ -0.11
ERC1-218ENST00000545948 TTBK1Q5TCY1 1321 aaPredicted RBP14.34□□□□□ -0.11
ERC1-218ENST00000545948 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
ERC1-218ENST00000545948 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
ERC1-218ENST00000545948 KIF21BO75037 1637 aa14.29□□□□□ -0.12
ERC1-218ENST00000545948 WDR62O43379 1518 aa14.27□□□□□ -0.12
ERC1-218ENST00000545948 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
ERC1-218ENST00000545948 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
ERC1-218ENST00000545948 CLIP1P30622 1438 aa14.22□□□□□ -0.13
ERC1-218ENST00000545948 VPS8Q8N3P4 1428 aa14.21□□□□□ -0.13
ERC1-218ENST00000545948 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
ERC1-218ENST00000545948 SYNJ1O43426 1573 aa14.19□□□□□ -0.14
ERC1-218ENST00000545948 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
ERC1-218ENST00000545948 MIER1Q8N108 512 aa14.16□□□□□ -0.14
ERC1-218ENST00000545948 APLP2Q06481 763 aa14.15□□□□□ -0.14
ERC1-218ENST00000545948 YTHDC1Q96MU7 727 aaKnown RBP14.13□□□□□ -0.15
ERC1-218ENST00000545948 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
ERC1-218ENST00000545948 RAPGEF2Q9Y4G8 1499 aa14.09□□□□□ -0.15
ERC1-218ENST00000545948 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
ERC1-218ENST00000545948 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
ERC1-218ENST00000545948 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
ERC1-218ENST00000545948 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
ERC1-218ENST00000545948 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
ERC1-218ENST00000545948 ERICH3Q5RHP9 1530 aa14.03□□□□□ -0.16
ERC1-218ENST00000545948 DHX57Q6P158 1386 aaKnown RBP14□□□□□ -0.17
ERC1-218ENST00000545948 BIVM-ERCC5R4GMW8 1640 aa13.99□□□□□ -0.17
ERC1-218ENST00000545948 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
ERC1-218ENST00000545948 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
ERC1-218ENST00000545948 ARAP1Q96P48 1450 aa13.95□□□□□ -0.18
ERC1-218ENST00000545948 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
ERC1-218ENST00000545948 FANCD2Q9BXW9 1451 aa13.92□□□□□ -0.18
ERC1-218ENST00000545948 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
ERC1-218ENST00000545948 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms