RNA–Protein interactions for RNA: ENST00000543086.7

ERC1-213, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 1 (best) BASIC

Gene ERC1, Length 9,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-213ENST00000543086 NISCHQ9Y2I1 1504 aa18.02■□□□□ 0.47
ERC1-213ENST00000543086 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
ERC1-213ENST00000543086 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
ERC1-213ENST00000543086 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
ERC1-213ENST00000543086 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
ERC1-213ENST00000543086 MYO15BQ96JP2 1530 aa14.94□□□□□ -0.02
ERC1-213ENST00000543086 ABCC9O60706 1549 aa14.88□□□□□ -0.03
ERC1-213ENST00000543086 HRCP23327 699 aa14.83□□□□□ -0.04
ERC1-213ENST00000543086 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
ERC1-213ENST00000543086 MYT1Q01538 1121 aa14.66□□□□□ -0.06
ERC1-213ENST00000543086 CHIC1Q5VXU3 224 aa14.5□□□□□ -0.09
ERC1-213ENST00000543086 RB1CC1Q8TDY2 1594 aa14.49□□□□□ -0.09
ERC1-213ENST00000543086 SHROOM4Q9ULL8 1493 aa14.49□□□□□ -0.09
ERC1-213ENST00000543086 SUPT5HO00267 1087 aaKnown RBP14.44□□□□□ -0.1
ERC1-213ENST00000543086 NACADO15069 1562 aa14.39□□□□□ -0.11
ERC1-213ENST00000543086 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
ERC1-213ENST00000543086 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
ERC1-213ENST00000543086 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.13
ERC1-213ENST00000543086 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
ERC1-213ENST00000543086 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
ERC1-213ENST00000543086 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
ERC1-213ENST00000543086 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
ERC1-213ENST00000543086 EEA1Q15075 1411 aa14.04□□□□□ -0.16
ERC1-213ENST00000543086 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
ERC1-213ENST00000543086 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.16
ERC1-213ENST00000543086 WRNQ14191 1432 aaPredicted RBP eCLIP14□□□□□ -0.17
ERC1-213ENST00000543086 CENPBP07199 599 aaPredicted RBP13.96□□□□□ -0.17
ERC1-213ENST00000543086 TOP2AP11388 1531 aaKnown RBP13.93□□□□□ -0.18
ERC1-213ENST00000543086 SMARCA4P51532 1647 aa13.92□□□□□ -0.18
ERC1-213ENST00000543086 WIZO95785 1651 aa13.92□□□□□ -0.18
ERC1-213ENST00000543086 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
ERC1-213ENST00000543086 KIF21BO75037 1637 aa13.91□□□□□ -0.18
ERC1-213ENST00000543086 PEG3Q9GZU2 1588 aa13.87□□□□□ -0.19
ERC1-213ENST00000543086 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
ERC1-213ENST00000543086 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
ERC1-213ENST00000543086 SMARCA2P51531 1590 aa13.71□□□□□ -0.21
ERC1-213ENST00000543086 MROH2BQ7Z745 1585 aa13.7□□□□□ -0.22
ERC1-213ENST00000543086 PPARGC1BQ86YN6 1023 aaKnown RBP13.68□□□□□ -0.22
ERC1-213ENST00000543086 DCAF8L2P0C7V8 631 aa13.65□□□□□ -0.22
ERC1-213ENST00000543086 ACIN1Q9UKV3 1341 aaKnown RBP13.65□□□□□ -0.22
ERC1-213ENST00000543086 POLR1AO95602 1720 aaPredicted RBP13.64□□□□□ -0.23
ERC1-213ENST00000543086 ERICH3Q5RHP9 1530 aa13.63□□□□□ -0.23
ERC1-213ENST00000543086 BIVM-ERCC5R4GMW8 1640 aa13.62□□□□□ -0.23
ERC1-213ENST00000543086 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
ERC1-213ENST00000543086 TNIKQ9UKE5 1360 aa13.62□□□□□ -0.23
ERC1-213ENST00000543086 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
ERC1-213ENST00000543086 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
ERC1-213ENST00000543086 CEP162Q5TB80 1403 aa13.58□□□□□ -0.24
ERC1-213ENST00000543086 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
ERC1-213ENST00000543086 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
ERC1-213ENST00000543086 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
ERC1-213ENST00000543086 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.24
ERC1-213ENST00000543086 CCER1Q8TC90 406 aaPredicted RBP13.52□□□□□ -0.25
ERC1-213ENST00000543086 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
ERC1-213ENST00000543086 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.25
ERC1-213ENST00000543086 VPS8Q8N3P4 1428 aa13.45□□□□□ -0.26
ERC1-213ENST00000543086 CFAP43Q8NDM7 1665 aa13.45□□□□□ -0.26
ERC1-213ENST00000543086 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
ERC1-213ENST00000543086 MAP3K1Q13233 1512 aa13.4□□□□□ -0.26
ERC1-213ENST00000543086 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
ERC1-213ENST00000543086 CUX2O14529 1486 aa13.36□□□□□ -0.27
ERC1-213ENST00000543086 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
ERC1-213ENST00000543086 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
ERC1-213ENST00000543086 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
ERC1-213ENST00000543086 CLIP1P30622 1438 aa13.35□□□□□ -0.27
ERC1-213ENST00000543086 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
ERC1-213ENST00000543086 NEUROD1Q13562 356 aa13.27□□□□□ -0.28
ERC1-213ENST00000543086 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
ERC1-213ENST00000543086 APLP2Q06481 763 aa13.24□□□□□ -0.29
ERC1-213ENST00000543086 CUL7Q14999 1698 aa13.21□□□□□ -0.29
ERC1-213ENST00000543086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
ERC1-213ENST00000543086 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
ERC1-213ENST00000543086 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
ERC1-213ENST00000543086 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
ERC1-213ENST00000543086 GCC2Q8IWJ2 1684 aa13.17□□□□□ -0.3
ERC1-213ENST00000543086 RRBP1Q9P2E9 1410 aaKnown RBP13.17□□□□□ -0.3
ERC1-213ENST00000543086 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
ERC1-213ENST00000543086 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.3
ERC1-213ENST00000543086 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
ERC1-213ENST00000543086 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
ERC1-213ENST00000543086 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
ERC1-213ENST00000543086 SOGA1O94964 1423 aa13.11□□□□□ -0.31
ERC1-213ENST00000543086 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
ERC1-213ENST00000543086 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
ERC1-213ENST00000543086 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
ERC1-213ENST00000543086 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
ERC1-213ENST00000543086 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
ERC1-213ENST00000543086 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
ERC1-213ENST00000543086 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
ERC1-213ENST00000543086 CUX1P39880 1505 aa13.05□□□□□ -0.32
ERC1-213ENST00000543086 RAPGEF2Q9Y4G8 1499 aa13.04□□□□□ -0.32
ERC1-213ENST00000543086 HECW1Q76N89 1606 aa13.03□□□□□ -0.32
ERC1-213ENST00000543086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.03□□□□□ -0.32
ERC1-213ENST00000543086 WDR97A6NE52 1622 aa13.01□□□□□ -0.33
ERC1-213ENST00000543086 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
ERC1-213ENST00000543086 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.33
ERC1-213ENST00000543086 FYCO1Q9BQS8 1478 aa12.99□□□□□ -0.33
ERC1-213ENST00000543086 CCNB3Q8WWL7 1395 aa12.98□□□□□ -0.33
ERC1-213ENST00000543086 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
ERC1-213ENST00000543086 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms