RNA–Protein interactions for RNA: ENST00000498171.5

DGCR8-210, Transcript of DGCR8, microprocessor complex subunit, humanhuman

TSL 1 (best)

Gene DGCR8, Length 3,661 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DGCR8-210ENST00000498171 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
DGCR8-210ENST00000498171 PELP1Q8IZL8 1130 aaKnown RBP19.99■□□□□ 0.79
DGCR8-210ENST00000498171 HRCP23327 699 aa19.78■□□□□ 0.76
DGCR8-210ENST00000498171 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
DGCR8-210ENST00000498171 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
DGCR8-210ENST00000498171 MYT1Q01538 1121 aa19.34■□□□□ 0.69
DGCR8-210ENST00000498171 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
DGCR8-210ENST00000498171 PCGF6Q9BYE7 350 aa19.19■□□□□ 0.66
DGCR8-210ENST00000498171 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
DGCR8-210ENST00000498171 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
DGCR8-210ENST00000498171 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
DGCR8-210ENST00000498171 DCAF8L2P0C7V8 631 aa18.66■□□□□ 0.58
DGCR8-210ENST00000498171 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.56
DGCR8-210ENST00000498171 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
DGCR8-210ENST00000498171 ACIN1Q9UKV3 1341 aaKnown RBP18.44■□□□□ 0.54
DGCR8-210ENST00000498171 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
DGCR8-210ENST00000498171 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
DGCR8-210ENST00000498171 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
DGCR8-210ENST00000498171 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
DGCR8-210ENST00000498171 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
DGCR8-210ENST00000498171 DCAF1Q9Y4B6 1507 aa18.2■□□□□ 0.5
DGCR8-210ENST00000498171 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
DGCR8-210ENST00000498171 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
DGCR8-210ENST00000498171 PRKCSHP14314 528 aaPredicted RBP18.16■□□□□ 0.5
DGCR8-210ENST00000498171 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
DGCR8-210ENST00000498171 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
DGCR8-210ENST00000498171 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
DGCR8-210ENST00000498171 ABCC9O60706 1549 aa17.89■□□□□ 0.46
DGCR8-210ENST00000498171 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
DGCR8-210ENST00000498171 ANP32EQ9BTT0 268 aa17.77■□□□□ 0.44
DGCR8-210ENST00000498171 DIEXFQ68CQ4 756 aaKnown RBP17.77■□□□□ 0.44
DGCR8-210ENST00000498171 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.43
DGCR8-210ENST00000498171 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
DGCR8-210ENST00000498171 RB1CC1Q8TDY2 1594 aa17.71■□□□□ 0.43
DGCR8-210ENST00000498171 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
DGCR8-210ENST00000498171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
DGCR8-210ENST00000498171 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
DGCR8-210ENST00000498171 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
DGCR8-210ENST00000498171 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
DGCR8-210ENST00000498171 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
DGCR8-210ENST00000498171 CCER1Q8TC90 406 aaPredicted RBP17.46■□□□□ 0.39
DGCR8-210ENST00000498171 WIZO95785 1651 aa17.46■□□□□ 0.39
DGCR8-210ENST00000498171 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
DGCR8-210ENST00000498171 NACADO15069 1562 aa17.42■□□□□ 0.38
DGCR8-210ENST00000498171 APLP2Q06481 763 aa17.37■□□□□ 0.37
DGCR8-210ENST00000498171 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
DGCR8-210ENST00000498171 MIER1Q8N108 512 aa17.29■□□□□ 0.36
DGCR8-210ENST00000498171 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
DGCR8-210ENST00000498171 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
DGCR8-210ENST00000498171 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
DGCR8-210ENST00000498171 ZNF316A6NFI3 1004 aaPredicted RBP17.19■□□□□ 0.34
DGCR8-210ENST00000498171 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
DGCR8-210ENST00000498171 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
DGCR8-210ENST00000498171 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
DGCR8-210ENST00000498171 SMARCA4P51532 1647 aa17.05■□□□□ 0.32
DGCR8-210ENST00000498171 BCANQ96GW7 911 aa17.03■□□□□ 0.32
DGCR8-210ENST00000498171 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
DGCR8-210ENST00000498171 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
DGCR8-210ENST00000498171 PABPN1Q86U42 306 aaKnown RBP eCLIP16.99■□□□□ 0.317e-7■□□□□ 10.4
DGCR8-210ENST00000498171 SOGA1O94964 1423 aa16.96■□□□□ 0.31
DGCR8-210ENST00000498171 RUSC2Q8N2Y8 1516 aa16.95■□□□□ 0.3
DGCR8-210ENST00000498171 RBM19Q9Y4C8 960 aaKnown RBP16.95■□□□□ 0.3
DGCR8-210ENST00000498171 CCDC136Q96JN2 1154 aa16.93■□□□□ 0.3
DGCR8-210ENST00000498171 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
DGCR8-210ENST00000498171 MSH5O43196 834 aa16.92■□□□□ 0.3
DGCR8-210ENST00000498171 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
DGCR8-210ENST00000498171 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
DGCR8-210ENST00000498171 DEKP35659 375 aaKnown RBP16.81■□□□□ 0.28
DGCR8-210ENST00000498171 CEP162Q5TB80 1403 aa16.78■□□□□ 0.28
DGCR8-210ENST00000498171 FKBP8Q14318 412 aa16.75■□□□□ 0.27
DGCR8-210ENST00000498171 ITGAEP38570 1179 aa16.74■□□□□ 0.27
DGCR8-210ENST00000498171 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.71■□□□□ 0.27
DGCR8-210ENST00000498171 UBE2Q2Q8WVN8 375 aa16.71■□□□□ 0.26
DGCR8-210ENST00000498171 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
DGCR8-210ENST00000498171 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.263e-7■■■■□ 25.1
DGCR8-210ENST00000498171 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
DGCR8-210ENST00000498171 PEG3Q9GZU2 1588 aa16.65■□□□□ 0.26
DGCR8-210ENST00000498171 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
DGCR8-210ENST00000498171 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
DGCR8-210ENST00000498171 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
DGCR8-210ENST00000498171 KCNH8Q96L42 1107 aa16.58■□□□□ 0.24
DGCR8-210ENST00000498171 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
DGCR8-210ENST00000498171 IL27Q8NEV9 243 aa16.54■□□□□ 0.24
DGCR8-210ENST00000498171 NBR1Q14596 966 aa16.54■□□□□ 0.24
DGCR8-210ENST00000498171 MYT1LQ9UL68 1186 aa16.52■□□□□ 0.24
DGCR8-210ENST00000498171 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
DGCR8-210ENST00000498171 EEA1Q15075 1411 aa16.51■□□□□ 0.23
DGCR8-210ENST00000498171 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
DGCR8-210ENST00000498171 FANCIQ9NVI1 1328 aa16.51■□□□□ 0.23
DGCR8-210ENST00000498171 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
DGCR8-210ENST00000498171 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
DGCR8-210ENST00000498171 EIF5BO60841 1220 aaKnown RBP16.49■□□□□ 0.23
DGCR8-210ENST00000498171 NEFLP07196 543 aa16.47■□□□□ 0.23
DGCR8-210ENST00000498171 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
DGCR8-210ENST00000498171 KIF21BO75037 1637 aa16.44■□□□□ 0.22
DGCR8-210ENST00000498171 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
DGCR8-210ENST00000498171 CLIP1P30622 1438 aa16.41■□□□□ 0.22
DGCR8-210ENST00000498171 PKNOX2Q96KN3 472 aa16.39■□□□□ 0.21
DGCR8-210ENST00000498171 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
DGCR8-210ENST00000498171 TOP2BQ02880 1626 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms