RNA–Protein interactions for RNA: ENST00000520475.5

PTK2-222, Transcript of protein tyrosine kinase 2, humanhuman

TSL 5

Gene PTK2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-222ENST00000520475 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
PTK2-222ENST00000520475 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
PTK2-222ENST00000520475 NISCHQ9Y2I1 1504 aa17.64■□□□□ 0.41
PTK2-222ENST00000520475 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
PTK2-222ENST00000520475 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
PTK2-222ENST00000520475 ABCC9O60706 1549 aa15.92■□□□□ 0.14
PTK2-222ENST00000520475 FOXD1Q16676 465 aa15.91■□□□□ 0.14
PTK2-222ENST00000520475 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
PTK2-222ENST00000520475 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
PTK2-222ENST00000520475 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
PTK2-222ENST00000520475 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
PTK2-222ENST00000520475 PPP6R1Q9UPN7 881 aa14.91□□□□□ -0.02
PTK2-222ENST00000520475 MSH5O43196 834 aa14.89□□□□□ -0.03
PTK2-222ENST00000520475 PIAS4Q8N2W9 510 aaPredicted RBP14.89□□□□□ -0.03
PTK2-222ENST00000520475 ADRA2BP18089 450 aa14.87□□□□□ -0.03
PTK2-222ENST00000520475 NACADO15069 1562 aa14.81□□□□□ -0.04
PTK2-222ENST00000520475 DCAF8L2P0C7V8 631 aa14.79□□□□□ -0.04
PTK2-222ENST00000520475 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
PTK2-222ENST00000520475 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
PTK2-222ENST00000520475 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
PTK2-222ENST00000520475 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
PTK2-222ENST00000520475 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
PTK2-222ENST00000520475 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
PTK2-222ENST00000520475 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
PTK2-222ENST00000520475 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
PTK2-222ENST00000520475 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
PTK2-222ENST00000520475 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
PTK2-222ENST00000520475 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
PTK2-222ENST00000520475 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
PTK2-222ENST00000520475 SCRIBQ14160 1630 aa14.16□□□□□ -0.14
PTK2-222ENST00000520475 CUX2O14529 1486 aa13.98□□□□□ -0.17
PTK2-222ENST00000520475 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
PTK2-222ENST00000520475 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
PTK2-222ENST00000520475 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
PTK2-222ENST00000520475 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
PTK2-222ENST00000520475 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
PTK2-222ENST00000520475 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
PTK2-222ENST00000520475 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
PTK2-222ENST00000520475 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
PTK2-222ENST00000520475 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
PTK2-222ENST00000520475 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
PTK2-222ENST00000520475 RSF1Q96T23 1441 aaPredicted RBP13.54□□□□□ -0.24
PTK2-222ENST00000520475 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
PTK2-222ENST00000520475 NESP48681 1621 aa13.53□□□□□ -0.24
PTK2-222ENST00000520475 SMARCA2P51531 1590 aa13.52□□□□□ -0.25
PTK2-222ENST00000520475 HMGXB3Q12766 1538 aa13.51□□□□□ -0.25
PTK2-222ENST00000520475 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
PTK2-222ENST00000520475 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
PTK2-222ENST00000520475 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
PTK2-222ENST00000520475 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
PTK2-222ENST00000520475 WIZO95785 1651 aa13.4□□□□□ -0.26
PTK2-222ENST00000520475 SUPT5HO00267 1087 aaKnown RBP13.37□□□□□ -0.27
PTK2-222ENST00000520475 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
PTK2-222ENST00000520475 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
PTK2-222ENST00000520475 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
PTK2-222ENST00000520475 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
PTK2-222ENST00000520475 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
PTK2-222ENST00000520475 WDR62O43379 1518 aa13.23□□□□□ -0.29
PTK2-222ENST00000520475 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
PTK2-222ENST00000520475 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
PTK2-222ENST00000520475 RIMBP3CA6NJZ7 1639 aa13.13□□□□□ -0.31
PTK2-222ENST00000520475 RIMBP3BA6NNM3 1639 aa13.13□□□□□ -0.31
PTK2-222ENST00000520475 RIMBP3Q9UFD9 1639 aa13.13□□□□□ -0.31
PTK2-222ENST00000520475 CEP164Q9UPV0 1460 aa13.12□□□□□ -0.31
PTK2-222ENST00000520475 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
PTK2-222ENST00000520475 CFTRP13569 1480 aa13.1□□□□□ -0.31
PTK2-222ENST00000520475 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
PTK2-222ENST00000520475 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
PTK2-222ENST00000520475 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
PTK2-222ENST00000520475 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
PTK2-222ENST00000520475 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
PTK2-222ENST00000520475 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
PTK2-222ENST00000520475 URB2Q14146 1524 aaKnown RBP12.95□□□□□ -0.34
PTK2-222ENST00000520475 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
PTK2-222ENST00000520475 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
PTK2-222ENST00000520475 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
PTK2-222ENST00000520475 IFT140Q96RY7 1462 aa12.87□□□□□ -0.35
PTK2-222ENST00000520475 CHD1O14646 1710 aa12.85□□□□□ -0.35
PTK2-222ENST00000520475 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
PTK2-222ENST00000520475 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
PTK2-222ENST00000520475 ARAP1Q96P48 1450 aa12.83□□□□□ -0.36
PTK2-222ENST00000520475 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
PTK2-222ENST00000520475 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
PTK2-222ENST00000520475 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
PTK2-222ENST00000520475 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.37
PTK2-222ENST00000520475 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
PTK2-222ENST00000520475 FBLN2P98095 1184 aa12.73□□□□□ -0.37
PTK2-222ENST00000520475 CUX1P39880 1505 aa12.72□□□□□ -0.37
PTK2-222ENST00000520475 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
PTK2-222ENST00000520475 SOGA1O94964 1423 aa12.7□□□□□ -0.38
PTK2-222ENST00000520475 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
PTK2-222ENST00000520475 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.383e-6■■■■□ 24.7
PTK2-222ENST00000520475 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
PTK2-222ENST00000520475 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
PTK2-222ENST00000520475 FGD5Q6ZNL6 1462 aa12.65□□□□□ -0.38
PTK2-222ENST00000520475 TOP2BQ02880 1626 aa12.64□□□□□ -0.39
PTK2-222ENST00000520475 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
PTK2-222ENST00000520475 CLASP1Q7Z460 1538 aa12.62□□□□□ -0.39
PTK2-222ENST00000520475 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
PTK2-222ENST00000520475 BIVM-ERCC5R4GMW8 1640 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms