Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.49■□□□□ 0.39
BEST4Q8NFU0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BEST4Q8NFU0 AC125437.2-201ENST00000625180 2167 ntBASIC17.49■□□□□ 0.39
BEST4Q8NFU0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 SMUG1P1-201ENST00000590640 811 ntBASIC17.48■□□□□ 0.39
BEST4Q8NFU0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.48■□□□□ 0.39
BEST4Q8NFU0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 TCF3P1-201ENST00000423021 1937 ntBASIC17.48■□□□□ 0.39
BEST4Q8NFU0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BEST4Q8NFU0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
BEST4Q8NFU0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.46■□□□□ 0.39
BEST4Q8NFU0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST4Q8NFU0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST4Q8NFU0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST4Q8NFU0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST4Q8NFU0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST4Q8NFU0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST4Q8NFU0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms