RNA–Protein interactions for RNA: ENST00000589710.5

CIRBP-225, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-225ENST00000589710 NISCHQ9Y2I1 1504 aa45.6■■■■■ 4.89
CIRBP-225ENST00000589710 CCDC180Q9P1Z9 1646 aa40.15■■■■■ 4.02
CIRBP-225ENST00000589710 ABCC9O60706 1549 aa38.51■■■■□ 3.76
CIRBP-225ENST00000589710 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
CIRBP-225ENST00000589710 DCAF8L2P0C7V8 631 aa37.82■■■■□ 3.64
CIRBP-225ENST00000589710 DCAF1Q9Y4B6 1507 aa37.72■■■■□ 3.63
CIRBP-225ENST00000589710 SHROOM4Q9ULL8 1493 aa37.54■■■■□ 3.6
CIRBP-225ENST00000589710 MYO15BQ96JP2 1530 aa37.53■■■■□ 3.6
CIRBP-225ENST00000589710 NACADO15069 1562 aa37.51■■■■□ 3.59
CIRBP-225ENST00000589710 RB1CC1Q8TDY2 1594 aa37.36■■■■□ 3.57
CIRBP-225ENST00000589710 SCRIBQ14160 1630 aa36.79■■■■□ 3.48
CIRBP-225ENST00000589710 UNC13AQ9UPW8 1703 aa36.62■■■■□ 3.45
CIRBP-225ENST00000589710 BICRAQ9NZM4 1560 aa36.26■■■■□ 3.39
CIRBP-225ENST00000589710 SUPT5HO00267 1087 aaKnown RBP36.18■■■■□ 3.38
CIRBP-225ENST00000589710 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
CIRBP-225ENST00000589710 CECR2Q9BXF3 1484 aa35.48■■■■□ 3.27
CIRBP-225ENST00000589710 RSF1Q96T23 1441 aaPredicted RBP35.46■■■■□ 3.27
CIRBP-225ENST00000589710 MROH2BQ7Z745 1585 aa35.29■■■■□ 3.24
CIRBP-225ENST00000589710 BAZ1AQ9NRL2 1556 aaPredicted RBP35.27■■■■□ 3.24
CIRBP-225ENST00000589710 SMARCA4P51532 1647 aa35.22■■■■□ 3.23
CIRBP-225ENST00000589710 EIF4G1Q04637 1599 aaKnown RBP35.22■■■■□ 3.23
CIRBP-225ENST00000589710 WIZO95785 1651 aa35.05■■■■□ 3.2
CIRBP-225ENST00000589710 CC2D2AQ9P2K1 1620 aa34.86■■■■□ 3.17
CIRBP-225ENST00000589710 PEG3Q9GZU2 1588 aa34.83■■■■□ 3.17
CIRBP-225ENST00000589710 ATAD2BQ9ULI0 1458 aa34.78■■■■□ 3.16
CIRBP-225ENST00000589710 SMARCA2P51531 1590 aa34.76■■■■□ 3.16
CIRBP-225ENST00000589710 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
CIRBP-225ENST00000589710 CHIC1Q5VXU3 224 aa34.61■■■■□ 3.13
CIRBP-225ENST00000589710 DNAJC5BQ9UF47 199 aa34.61■■■■□ 3.13
CIRBP-225ENST00000589710 NCAPD3P42695 1498 aa34.59■■■■□ 3.13
CIRBP-225ENST00000589710 BAZ1BQ9UIG0 1483 aaKnown RBP34.56■■■■□ 3.12
CIRBP-225ENST00000589710 HMGXB3Q12766 1538 aa34.54■■■■□ 3.12
CIRBP-225ENST00000589710 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
CIRBP-225ENST00000589710 TRIM41Q8WV44 630 aa33.94■■■■□ 3.02
CIRBP-225ENST00000589710 ABCC8Q09428 1581 aa33.71■■■□□ 2.99
CIRBP-225ENST00000589710 CFTRP13569 1480 aa33.65■■■□□ 2.98
CIRBP-225ENST00000589710 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
CIRBP-225ENST00000589710 NESP48681 1621 aa33.6■■■□□ 2.97
CIRBP-225ENST00000589710 LAMC3Q9Y6N6 1575 aa33.57■■■□□ 2.96
CIRBP-225ENST00000589710 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
CIRBP-225ENST00000589710 FAM9AQ8IZU1 332 aaPredicted RBP33.43■■■□□ 2.94
CIRBP-225ENST00000589710 WRNQ14191 1432 aaPredicted RBP eCLIP33.4■■■□□ 2.941e-6■■■■■ 58.5
CIRBP-225ENST00000589710 LOC105371045A0A1W2PR82 267 aa33.37■■■□□ 2.93
CIRBP-225ENST00000589710 FANCD2Q9BXW9 1451 aa33.3■■■□□ 2.92
CIRBP-225ENST00000589710 SYNJ1O43426 1573 aa33.28■■■□□ 2.92
CIRBP-225ENST00000589710 PDS5BQ9NTI5 1447 aa33.28■■■□□ 2.92
CIRBP-225ENST00000589710 KIF21AQ7Z4S6 1674 aa33.24■■■□□ 2.91
CIRBP-225ENST00000589710 CEP164Q9UPV0 1460 aa33.17■■■□□ 2.9
CIRBP-225ENST00000589710 TOP2BQ02880 1626 aa33.09■■■□□ 2.89
CIRBP-225ENST00000589710 ERCC6Q03468 1493 aa33.08■■■□□ 2.89
CIRBP-225ENST00000589710 SOGA1O94964 1423 aa33.08■■■□□ 2.89
CIRBP-225ENST00000589710 EHMT2Q96KQ7 1210 aa33.06■■■□□ 2.88
CIRBP-225ENST00000589710 BIVM-ERCC5R4GMW8 1640 aa33.04■■■□□ 2.88
CIRBP-225ENST00000589710 CUX1P39880 1505 aa32.98■■■□□ 2.87
CIRBP-225ENST00000589710 EEA1Q15075 1411 aa32.95■■■□□ 2.87
CIRBP-225ENST00000589710 RUSC2Q8N2Y8 1516 aa32.94■■■□□ 2.86
CIRBP-225ENST00000589710 URB2Q14146 1524 aaKnown RBP32.93■■■□□ 2.86
CIRBP-225ENST00000589710 MRC2Q9UBG0 1479 aa32.93■■■□□ 2.86
CIRBP-225ENST00000589710 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
CIRBP-225ENST00000589710 THOC2Q8NI27 1593 aaKnown RBP32.89■■■□□ 2.86
CIRBP-225ENST00000589710 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
CIRBP-225ENST00000589710 WDR62O43379 1518 aa32.81■■■□□ 2.84
CIRBP-225ENST00000589710 CSRNP3Q8WYN3 585 aa32.81■■■□□ 2.84
CIRBP-225ENST00000589710 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
CIRBP-225ENST00000589710 POLA1P09884 1462 aaPredicted RBP32.66■■■□□ 2.82
CIRBP-225ENST00000589710 GOLGA3Q08378 1498 aa32.59■■■□□ 2.81
CIRBP-225ENST00000589710 KIF21BO75037 1637 aa32.56■■■□□ 2.8
CIRBP-225ENST00000589710 KIF27Q86VH2 1401 aa32.54■■■□□ 2.8
CIRBP-225ENST00000589710 CUX2O14529 1486 aa32.53■■■□□ 2.8
CIRBP-225ENST00000589710 RAD54L2Q9Y4B4 1467 aa32.53■■■□□ 2.8
CIRBP-225ENST00000589710 UBTFP17480 764 aaKnown RBP32.51■■■□□ 2.79
CIRBP-225ENST00000589710 TNIKQ9UKE5 1360 aa32.46■■■□□ 2.79
CIRBP-225ENST00000589710 TARBP1Q13395 1621 aaKnown RBP32.46■■■□□ 2.79
CIRBP-225ENST00000589710 WDR97A6NE52 1622 aa32.43■■■□□ 2.78
CIRBP-225ENST00000589710 ABCA10Q8WWZ4 1543 aa32.41■■■□□ 2.78
CIRBP-225ENST00000589710 IFT140Q96RY7 1462 aa32.4■■■□□ 2.78
CIRBP-225ENST00000589710 RAPGEF2Q9Y4G8 1499 aa32.39■■■□□ 2.78
CIRBP-225ENST00000589710 CEP162Q5TB80 1403 aa32.39■■■□□ 2.77
CIRBP-225ENST00000589710 PRXQ9BXM0 1461 aa32.31■■■□□ 2.76
CIRBP-225ENST00000589710 ERICH3Q5RHP9 1530 aa32.29■■■□□ 2.76
CIRBP-225ENST00000589710 ZNF608Q9ULD9 1512 aaPredicted RBP32.27■■■□□ 2.76
CIRBP-225ENST00000589710 ABCA5Q8WWZ7 1642 aa32.24■■■□□ 2.75
CIRBP-225ENST00000589710 TDRD9Q8NDG6 1382 aaKnown RBP32.24■■■□□ 2.75
CIRBP-225ENST00000589710 IGF1RP08069 1367 aa32.2■■■□□ 2.74
CIRBP-225ENST00000589710 EIF4G3O43432 1585 aaKnown RBP32.19■■■□□ 2.74
CIRBP-225ENST00000589710 AQRO60306 1485 aaKnown RBP eCLIP32.17■■■□□ 2.743e-10■■■■■ 35.8
CIRBP-225ENST00000589710 GAPVD1Q14C86 1478 aa32.15■■■□□ 2.74
CIRBP-225ENST00000589710 PBRM1Q86U86 1689 aa32.09■■■□□ 2.73
CIRBP-225ENST00000589710 CLIP1P30622 1438 aa32.09■■■□□ 2.73
CIRBP-225ENST00000589710 CARMIL1Q5VZK9 1371 aa32.07■■■□□ 2.72
CIRBP-225ENST00000589710 RANGAP1P46060 587 aaPredicted RBP32.06■■■□□ 2.72
CIRBP-225ENST00000589710 PCGF6Q9BYE7 350 aa32.05■■■□□ 2.72
CIRBP-225ENST00000589710 GRIN2BQ13224 1484 aa32.01■■■□□ 2.72
CIRBP-225ENST00000589710 CUL7Q14999 1698 aa31.96■■■□□ 2.71
CIRBP-225ENST00000589710 TRIM26Q12899 539 aaPredicted RBP31.91■■■□□ 2.7
CIRBP-225ENST00000589710 SNAPC4Q5SXM2 1469 aa31.9■■■□□ 2.7
CIRBP-225ENST00000589710 PPARGC1BQ86YN6 1023 aaKnown RBP31.9■■■□□ 2.7
CIRBP-225ENST00000589710 ADAMTS12P58397 1594 aa31.87■■■□□ 2.69
CIRBP-225ENST00000589710 MAGI1Q96QZ7 1491 aaPredicted RBP31.84■■■□□ 2.69
CIRBP-225ENST00000589710 VPS8Q8N3P4 1428 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms