RNA–Protein interactions for RNA: ENST00000411546.3

SMG1P5-201, Transcript of SMG1 pseudogene 5, humanhuman

TSL 1 (best) BASIC

Gene SMG1P5, Length 2,362 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P5-201ENST00000411546 NISCHQ9Y2I1 1504 aa45.8■■■■■ 4.92
SMG1P5-201ENST00000411546 CCDC180Q9P1Z9 1646 aa39.59■■■■□ 3.93
SMG1P5-201ENST00000411546 ZCCHC6Q5VYS8 1495 aaKnown RBP38.46■■■■□ 3.75
SMG1P5-201ENST00000411546 DCAF8L2P0C7V8 631 aa38.34■■■■□ 3.73
SMG1P5-201ENST00000411546 SHROOM4Q9ULL8 1493 aa37.99■■■■□ 3.67
SMG1P5-201ENST00000411546 ABCC9O60706 1549 aa37.91■■■■□ 3.66
SMG1P5-201ENST00000411546 DCAF1Q9Y4B6 1507 aa37.57■■■■□ 3.61
SMG1P5-201ENST00000411546 MYO15BQ96JP2 1530 aa37.02■■■■□ 3.52
SMG1P5-201ENST00000411546 NACADO15069 1562 aa36.93■■■■□ 3.5
SMG1P5-201ENST00000411546 SCRIBQ14160 1630 aa36.87■■■■□ 3.49
SMG1P5-201ENST00000411546 RB1CC1Q8TDY2 1594 aa36.64■■■■□ 3.46
SMG1P5-201ENST00000411546 SUPT5HO00267 1087 aaKnown RBP36.56■■■■□ 3.44
SMG1P5-201ENST00000411546 UNC13AQ9UPW8 1703 aa36.1■■■■□ 3.37
SMG1P5-201ENST00000411546 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
SMG1P5-201ENST00000411546 CECR2Q9BXF3 1484 aa35.85■■■■□ 3.33
SMG1P5-201ENST00000411546 BICRAQ9NZM4 1560 aa35.74■■■■□ 3.31
SMG1P5-201ENST00000411546 RSF1Q96T23 1441 aaPredicted RBP35.7■■■■□ 3.31
SMG1P5-201ENST00000411546 MROH2BQ7Z745 1585 aa35.56■■■■□ 3.28
SMG1P5-201ENST00000411546 WIZO95785 1651 aa35.28■■■■□ 3.24
SMG1P5-201ENST00000411546 BAZ1AQ9NRL2 1556 aaPredicted RBP35.26■■■■□ 3.23
SMG1P5-201ENST00000411546 SMARCA4P51532 1647 aa35.17■■■■□ 3.22
SMG1P5-201ENST00000411546 CHIC1Q5VXU3 224 aa34.88■■■■□ 3.17
SMG1P5-201ENST00000411546 TOP2AP11388 1531 aaKnown RBP34.68■■■■□ 3.14
SMG1P5-201ENST00000411546 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
SMG1P5-201ENST00000411546 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
SMG1P5-201ENST00000411546 PEG3Q9GZU2 1588 aa34.57■■■■□ 3.12
SMG1P5-201ENST00000411546 CCDC88BA6NC98 1476 aa34.53■■■■□ 3.12
SMG1P5-201ENST00000411546 SMARCA2P51531 1590 aa34.47■■■■□ 3.11
SMG1P5-201ENST00000411546 BAZ1BQ9UIG0 1483 aaKnown RBP34.42■■■■□ 3.1
SMG1P5-201ENST00000411546 NCAPD3P42695 1498 aa34.2■■■■□ 3.07
SMG1P5-201ENST00000411546 TRIM41Q8WV44 630 aa34.15■■■■□ 3.06
SMG1P5-201ENST00000411546 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
SMG1P5-201ENST00000411546 HMGXB3Q12766 1538 aa34.06■■■■□ 3.04
SMG1P5-201ENST00000411546 ABCC8Q09428 1581 aa33.98■■■■□ 3.03
SMG1P5-201ENST00000411546 FAM9AQ8IZU1 332 aaPredicted RBP33.84■■■■□ 3.01
SMG1P5-201ENST00000411546 LOC105371045A0A1W2PR82 267 aa33.82■■■■□ 3
SMG1P5-201ENST00000411546 DNAJC5BQ9UF47 199 aa33.8■■■■□ 3
SMG1P5-201ENST00000411546 EHMT2Q96KQ7 1210 aa33.61■■■□□ 2.97
SMG1P5-201ENST00000411546 WRNQ14191 1432 aaPredicted RBP eCLIP33.55■■■□□ 2.96
SMG1P5-201ENST00000411546 CFTRP13569 1480 aa33.52■■■□□ 2.96
SMG1P5-201ENST00000411546 SYNJ1O43426 1573 aa33.47■■■□□ 2.95
SMG1P5-201ENST00000411546 CADPSQ9ULU8 1353 aa33.43■■■□□ 2.94
SMG1P5-201ENST00000411546 SOGA1O94964 1423 aa33.38■■■□□ 2.93
SMG1P5-201ENST00000411546 NESP48681 1621 aa33.37■■■□□ 2.93
SMG1P5-201ENST00000411546 RUSC2Q8N2Y8 1516 aa33.32■■■□□ 2.92
SMG1P5-201ENST00000411546 CUX1P39880 1505 aa33.19■■■□□ 2.9
SMG1P5-201ENST00000411546 TOP2BQ02880 1626 aa33.15■■■□□ 2.9
SMG1P5-201ENST00000411546 PRDM2Q13029 1718 aa33.14■■■□□ 2.9
SMG1P5-201ENST00000411546 FANCD2Q9BXW9 1451 aa33.1■■■□□ 2.89
SMG1P5-201ENST00000411546 BIVM-ERCC5R4GMW8 1640 aa33.05■■■□□ 2.88
SMG1P5-201ENST00000411546 CSRNP3Q8WYN3 585 aa33.01■■■□□ 2.87
SMG1P5-201ENST00000411546 LAMC3Q9Y6N6 1575 aa32.94■■■□□ 2.86
SMG1P5-201ENST00000411546 EEA1Q15075 1411 aa32.85■■■□□ 2.85
SMG1P5-201ENST00000411546 CEP164Q9UPV0 1460 aa32.81■■■□□ 2.84
SMG1P5-201ENST00000411546 FGD5Q6ZNL6 1462 aa32.8■■■□□ 2.84
SMG1P5-201ENST00000411546 PDS5BQ9NTI5 1447 aa32.76■■■□□ 2.84
SMG1P5-201ENST00000411546 KIF21AQ7Z4S6 1674 aa32.76■■■□□ 2.83
SMG1P5-201ENST00000411546 TOPBP1Q92547 1522 aa32.73■■■□□ 2.83
SMG1P5-201ENST00000411546 UBTFP17480 764 aaKnown RBP32.73■■■□□ 2.83
SMG1P5-201ENST00000411546 URB2Q14146 1524 aaKnown RBP32.73■■■□□ 2.83
SMG1P5-201ENST00000411546 RAD54L2Q9Y4B4 1467 aa32.68■■■□□ 2.82
SMG1P5-201ENST00000411546 DNMBPQ6XZF7 1577 aa32.68■■■□□ 2.82
SMG1P5-201ENST00000411546 CUX2O14529 1486 aa32.64■■■□□ 2.82
SMG1P5-201ENST00000411546 POLA1P09884 1462 aaPredicted RBP32.63■■■□□ 2.81
SMG1P5-201ENST00000411546 RAPGEF2Q9Y4G8 1499 aa32.62■■■□□ 2.81
SMG1P5-201ENST00000411546 KIF27Q86VH2 1401 aa32.62■■■□□ 2.81
SMG1P5-201ENST00000411546 GOLGA3Q08378 1498 aa32.59■■■□□ 2.81
SMG1P5-201ENST00000411546 TNIKQ9UKE5 1360 aa32.53■■■□□ 2.8
SMG1P5-201ENST00000411546 KIF21BO75037 1637 aa32.51■■■□□ 2.8
SMG1P5-201ENST00000411546 RANGAP1P46060 587 aaPredicted RBP32.51■■■□□ 2.8
SMG1P5-201ENST00000411546 CEP162Q5TB80 1403 aa32.49■■■□□ 2.79
SMG1P5-201ENST00000411546 IGF1RP08069 1367 aa32.46■■■□□ 2.79
SMG1P5-201ENST00000411546 PRXQ9BXM0 1461 aa32.45■■■□□ 2.79
SMG1P5-201ENST00000411546 PPARGC1BQ86YN6 1023 aaKnown RBP32.39■■■□□ 2.78
SMG1P5-201ENST00000411546 TDRD9Q8NDG6 1382 aaKnown RBP32.38■■■□□ 2.77
SMG1P5-201ENST00000411546 ABCA10Q8WWZ4 1543 aa32.38■■■□□ 2.77
SMG1P5-201ENST00000411546 MRC2Q9UBG0 1479 aa32.36■■■□□ 2.77
SMG1P5-201ENST00000411546 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
SMG1P5-201ENST00000411546 PCGF6Q9BYE7 350 aa32.29■■■□□ 2.76
SMG1P5-201ENST00000411546 CARMIL1Q5VZK9 1371 aa32.27■■■□□ 2.76
SMG1P5-201ENST00000411546 ERICH3Q5RHP9 1530 aa32.24■■■□□ 2.75
SMG1P5-201ENST00000411546 WDR97A6NE52 1622 aa32.22■■■□□ 2.75
SMG1P5-201ENST00000411546 TARBP1Q13395 1621 aaKnown RBP32.19■■■□□ 2.74
SMG1P5-201ENST00000411546 CLIP1P30622 1438 aa32.19■■■□□ 2.74
SMG1P5-201ENST00000411546 WDR62O43379 1518 aa32.15■■■□□ 2.74
SMG1P5-201ENST00000411546 AQRO60306 1485 aaKnown RBP eCLIP32.14■■■□□ 2.73
SMG1P5-201ENST00000411546 GAPVD1Q14C86 1478 aa32.13■■■□□ 2.73
SMG1P5-201ENST00000411546 TTBK1Q5TCY1 1321 aaPredicted RBP32.12■■■□□ 2.73
SMG1P5-201ENST00000411546 ABCA5Q8WWZ7 1642 aa32.1■■■□□ 2.73
SMG1P5-201ENST00000411546 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
SMG1P5-201ENST00000411546 ZNF608Q9ULD9 1512 aaPredicted RBP32.08■■■□□ 2.73
SMG1P5-201ENST00000411546 TRIM26Q12899 539 aaPredicted RBP31.96■■■□□ 2.71
SMG1P5-201ENST00000411546 IFT140Q96RY7 1462 aa31.94■■■□□ 2.7
SMG1P5-201ENST00000411546 CUL7Q14999 1698 aa31.9■■■□□ 2.7
SMG1P5-201ENST00000411546 ARAP1Q96P48 1450 aa31.88■■■□□ 2.69
SMG1P5-201ENST00000411546 ARHGAP35Q9NRY4 1499 aa31.85■■■□□ 2.69
SMG1P5-201ENST00000411546 P3H3Q8IVL6 736 aa31.85■■■□□ 2.69
SMG1P5-201ENST00000411546 PBRM1Q86U86 1689 aa31.85■■■□□ 2.69
SMG1P5-201ENST00000411546 VPS8Q8N3P4 1428 aa31.85■■■□□ 2.69
SMG1P5-201ENST00000411546 GRIN2BQ13224 1484 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms