RNA–Protein interactions for RNA: ENST00000436717.6

RCAN3-205, Transcript of RCAN family member 3, humanhuman

TSL 3 BASIC

Gene RCAN3, Length 2,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCAN3-205ENST00000436717 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
RCAN3-205ENST00000436717 SHROOM4Q9ULL8 1493 aa32.36■■■□□ 2.77
RCAN3-205ENST00000436717 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
RCAN3-205ENST00000436717 MYO15BQ96JP2 1530 aa31.3■■■□□ 2.6
RCAN3-205ENST00000436717 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
RCAN3-205ENST00000436717 HRCP23327 699 aa31.16■■■□□ 2.58
RCAN3-205ENST00000436717 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
RCAN3-205ENST00000436717 PCGF6Q9BYE7 350 aa30.95■■■□□ 2.54
RCAN3-205ENST00000436717 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
RCAN3-205ENST00000436717 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
RCAN3-205ENST00000436717 PPARGC1BQ86YN6 1023 aaKnown RBP30.77■■■□□ 2.52
RCAN3-205ENST00000436717 LOC105371045A0A1W2PR82 267 aa30.48■■■□□ 2.47
RCAN3-205ENST00000436717 DCAF1Q9Y4B6 1507 aa30.25■■■□□ 2.43
RCAN3-205ENST00000436717 TRIM26Q12899 539 aaPredicted RBP29.96■■■□□ 2.39
RCAN3-205ENST00000436717 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
RCAN3-205ENST00000436717 ABCC9O60706 1549 aa29.58■■■□□ 2.33
RCAN3-205ENST00000436717 EHMT2Q96KQ7 1210 aa29.57■■■□□ 2.32
RCAN3-205ENST00000436717 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
RCAN3-205ENST00000436717 RSF1Q96T23 1441 aaPredicted RBP29.47■■■□□ 2.31
RCAN3-205ENST00000436717 SCRIBQ14160 1630 aa29.39■■■□□ 2.29
RCAN3-205ENST00000436717 ZEB1P37275 1124 aaPredicted RBP29.37■■■□□ 2.29
RCAN3-205ENST00000436717 RB1CC1Q8TDY2 1594 aa29.34■■■□□ 2.29
RCAN3-205ENST00000436717 SCAF1Q9H7N4 1312 aaKnown RBP29.24■■■□□ 2.27
RCAN3-205ENST00000436717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.92■■■□□ 2.22
RCAN3-205ENST00000436717 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
RCAN3-205ENST00000436717 PELP1Q8IZL8 1130 aaKnown RBP28.88■■■□□ 2.21
RCAN3-205ENST00000436717 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
RCAN3-205ENST00000436717 CCER1Q8TC90 406 aaPredicted RBP28.76■■■□□ 2.19
RCAN3-205ENST00000436717 TTBK1Q5TCY1 1321 aaPredicted RBP28.73■■■□□ 2.19
RCAN3-205ENST00000436717 WIZO95785 1651 aa28.69■■■□□ 2.18
RCAN3-205ENST00000436717 NEUROD1Q13562 356 aa28.66■■■□□ 2.18
RCAN3-205ENST00000436717 NACADO15069 1562 aa28.61■■■□□ 2.17
RCAN3-205ENST00000436717 ACIN1Q9UKV3 1341 aaKnown RBP28.61■■■□□ 2.17
RCAN3-205ENST00000436717 DIEXFQ68CQ4 756 aaKnown RBP28.49■■■□□ 2.15
RCAN3-205ENST00000436717 GTF3C3Q9Y5Q9 886 aa28.42■■■□□ 2.14
RCAN3-205ENST00000436717 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.13
RCAN3-205ENST00000436717 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
RCAN3-205ENST00000436717 BAZ1AQ9NRL2 1556 aaPredicted RBP28.36■■■□□ 2.13
RCAN3-205ENST00000436717 CCDC88BA6NC98 1476 aa28.33■■■□□ 2.12
RCAN3-205ENST00000436717 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
RCAN3-205ENST00000436717 CENPBP07199 599 aaPredicted RBP28.25■■■□□ 2.11
RCAN3-205ENST00000436717 SOGA1O94964 1423 aa28.22■■■□□ 2.11
RCAN3-205ENST00000436717 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
RCAN3-205ENST00000436717 YTHDC1Q96MU7 727 aaKnown RBP28.1■■■□□ 2.09
RCAN3-205ENST00000436717 RUSC2Q8N2Y8 1516 aa28.1■■■□□ 2.09
RCAN3-205ENST00000436717 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
RCAN3-205ENST00000436717 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
RCAN3-205ENST00000436717 TNIKQ9UKE5 1360 aa28.04■■■□□ 2.08
RCAN3-205ENST00000436717 ZNF316A6NFI3 1004 aaPredicted RBP28.04■■■□□ 2.08
RCAN3-205ENST00000436717 SMARCA2P51531 1590 aa28■■■□□ 2.07
RCAN3-205ENST00000436717 CSRNP3Q8WYN3 585 aa27.99■■■□□ 2.07
RCAN3-205ENST00000436717 HNRNPUL2Q1KMD3 747 aaKnown RBP27.94■■■□□ 2.06
RCAN3-205ENST00000436717 SMARCA4P51532 1647 aa27.91■■■□□ 2.06
RCAN3-205ENST00000436717 MIER1Q8N108 512 aa27.88■■■□□ 2.05
RCAN3-205ENST00000436717 GOLGA3Q08378 1498 aa27.79■■■□□ 2.04
RCAN3-205ENST00000436717 EEA1Q15075 1411 aa27.76■■■□□ 2.03
RCAN3-205ENST00000436717 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
RCAN3-205ENST00000436717 RANGAP1P46060 587 aaPredicted RBP27.7■■■□□ 2.03
RCAN3-205ENST00000436717 CLIP1P30622 1438 aa27.59■■■□□ 2.01
RCAN3-205ENST00000436717 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
RCAN3-205ENST00000436717 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
RCAN3-205ENST00000436717 SYNJ1O43426 1573 aa27.54■■■□□ 2
RCAN3-205ENST00000436717 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
RCAN3-205ENST00000436717 APLP2Q06481 763 aa27.47■■□□□ 1.99
RCAN3-205ENST00000436717 MYT1Q01538 1121 aa27.46■■□□□ 1.99
RCAN3-205ENST00000436717 RAPGEF2Q9Y4G8 1499 aa27.44■■□□□ 1.98
RCAN3-205ENST00000436717 KIF21BO75037 1637 aa27.44■■□□□ 1.98
RCAN3-205ENST00000436717 BICRAQ9NZM4 1560 aa27.4■■□□□ 1.98
RCAN3-205ENST00000436717 DHX57Q6P158 1386 aaKnown RBP27.25■■□□□ 1.95
RCAN3-205ENST00000436717 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
RCAN3-205ENST00000436717 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
RCAN3-205ENST00000436717 KANK4Q5T7N3 995 aaPredicted RBP27.2■■□□□ 1.94
RCAN3-205ENST00000436717 SUPT16HQ9Y5B9 1047 aaKnown RBP27.17■■□□□ 1.94
RCAN3-205ENST00000436717 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
RCAN3-205ENST00000436717 ARAP1Q96P48 1450 aa27.08■■□□□ 1.92
RCAN3-205ENST00000436717 ITGAEP38570 1179 aa27.04■■□□□ 1.92
RCAN3-205ENST00000436717 CLSPNQ9HAW4 1339 aa27.04■■□□□ 1.92
RCAN3-205ENST00000436717 KCNH8Q96L42 1107 aa27.01■■□□□ 1.91
RCAN3-205ENST00000436717 TOP2BQ02880 1626 aa26.99■■□□□ 1.91
RCAN3-205ENST00000436717 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
RCAN3-205ENST00000436717 TSHZ2Q9NRE2 1034 aa26.89■■□□□ 1.9
RCAN3-205ENST00000436717 RRBP1Q9P2E9 1410 aaKnown RBP26.88■■□□□ 1.89
RCAN3-205ENST00000436717 ERICH3Q5RHP9 1530 aa26.86■■□□□ 1.89
RCAN3-205ENST00000436717 CCNB3Q8WWL7 1395 aa26.83■■□□□ 1.89
RCAN3-205ENST00000436717 BCANQ96GW7 911 aa26.82■■□□□ 1.88
RCAN3-205ENST00000436717 BIVM-ERCC5R4GMW8 1640 aa26.82■■□□□ 1.88
RCAN3-205ENST00000436717 RAB3GAP2Q9H2M9 1393 aa26.74■■□□□ 1.87
RCAN3-205ENST00000436717 CUX2O14529 1486 aa26.74■■□□□ 1.87
RCAN3-205ENST00000436717 ARHGAP35Q9NRY4 1499 aa26.74■■□□□ 1.87
RCAN3-205ENST00000436717 CUX1P39880 1505 aa26.73■■□□□ 1.87
RCAN3-205ENST00000436717 MAPKBP1O60336 1514 aa26.7■■□□□ 1.86
RCAN3-205ENST00000436717 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
RCAN3-205ENST00000436717 DDX10Q13206 875 aaKnown RBP26.68■■□□□ 1.86
RCAN3-205ENST00000436717 SIN3AQ96ST3 1273 aa26.66■■□□□ 1.86
RCAN3-205ENST00000436717 HIRIP3Q9BW71 556 aaPredicted RBP26.64■■□□□ 1.85
RCAN3-205ENST00000436717 FKBP8Q14318 412 aa26.62■■□□□ 1.85
RCAN3-205ENST00000436717 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
RCAN3-205ENST00000436717 ANP32EQ9BTT0 268 aa26.57■■□□□ 1.84
RCAN3-205ENST00000436717 FAM50AQ14320 339 aaKnown RBP26.55■■□□□ 1.84
RCAN3-205ENST00000436717 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms