RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 NISCHQ9Y2I1 1504 aa45.59■■■■■ 4.89
SUMO3-201ENST00000332859 CCDC180Q9P1Z9 1646 aa39.83■■■■□ 3.97
SUMO3-201ENST00000332859 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
SUMO3-201ENST00000332859 DCAF1Q9Y4B6 1507 aa37.73■■■■□ 3.63
SUMO3-201ENST00000332859 ABCC9O60706 1549 aa37.64■■■■□ 3.62
SUMO3-201ENST00000332859 DCAF8L2P0C7V8 631 aa37.6■■■■□ 3.61
SUMO3-201ENST00000332859 MYO15BQ96JP2 1530 aa37.32■■■■□ 3.56
SUMO3-201ENST00000332859 NACADO15069 1562 aa37.09■■■■□ 3.53
SUMO3-201ENST00000332859 SHROOM4Q9ULL8 1493 aa37.08■■■■□ 3.53
SUMO3-201ENST00000332859 RB1CC1Q8TDY2 1594 aa36.8■■■■□ 3.48
SUMO3-201ENST00000332859 SCRIBQ14160 1630 aa36.57■■■■□ 3.45
SUMO3-201ENST00000332859 UNC13AQ9UPW8 1703 aa36■■■■□ 3.35
SUMO3-201ENST00000332859 SUPT5HO00267 1087 aaKnown RBP35.65■■■■□ 3.3
SUMO3-201ENST00000332859 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
SUMO3-201ENST00000332859 PABPN1Q86U42 306 aaKnown RBP eCLIP35.45■■■■□ 3.27
SUMO3-201ENST00000332859 CECR2Q9BXF3 1484 aa35.39■■■■□ 3.26
SUMO3-201ENST00000332859 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.25
SUMO3-201ENST00000332859 BAZ1AQ9NRL2 1556 aaPredicted RBP35.23■■■■□ 3.23
SUMO3-201ENST00000332859 MROH2BQ7Z745 1585 aa35.19■■■■□ 3.22
SUMO3-201ENST00000332859 SMARCA4P51532 1647 aa35.07■■■■□ 3.2
SUMO3-201ENST00000332859 WIZO95785 1651 aa34.91■■■■□ 3.18
SUMO3-201ENST00000332859 PEG3Q9GZU2 1588 aa34.65■■■■□ 3.14
SUMO3-201ENST00000332859 TOP2AP11388 1531 aaKnown RBP34.59■■■■□ 3.13
SUMO3-201ENST00000332859 EIF4G1Q04637 1599 aaKnown RBP34.59■■■■□ 3.13
SUMO3-201ENST00000332859 SMARCA2P51531 1590 aa34.51■■■■□ 3.12
SUMO3-201ENST00000332859 ATAD2BQ9ULI0 1458 aa34.49■■■■□ 3.11
SUMO3-201ENST00000332859 BAZ1BQ9UIG0 1483 aaKnown RBP34.31■■■■□ 3.08
SUMO3-201ENST00000332859 NCAPD3P42695 1498 aa34.21■■■■□ 3.07
SUMO3-201ENST00000332859 HMGXB3Q12766 1538 aa34.19■■■■□ 3.06
SUMO3-201ENST00000332859 CCDC88BA6NC98 1476 aa34.19■■■■□ 3.06
SUMO3-201ENST00000332859 CHIC1Q5VXU3 224 aa34.11■■■■□ 3.05
SUMO3-201ENST00000332859 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
SUMO3-201ENST00000332859 TRIM41Q8WV44 630 aa33.56■■■□□ 2.96
SUMO3-201ENST00000332859 ABCC8Q09428 1581 aa33.45■■■□□ 2.94
SUMO3-201ENST00000332859 CFTRP13569 1480 aa33.44■■■□□ 2.94
SUMO3-201ENST00000332859 CADPSQ9ULU8 1353 aa33.33■■■□□ 2.93
SUMO3-201ENST00000332859 PRDM2Q13029 1718 aa33.3■■■□□ 2.92
SUMO3-201ENST00000332859 WRNQ14191 1432 aaPredicted RBP eCLIP33.27■■■□□ 2.92
SUMO3-201ENST00000332859 DNAJC5BQ9UF47 199 aa33.17■■■□□ 2.9
SUMO3-201ENST00000332859 SYNJ1O43426 1573 aa33.12■■■□□ 2.89
SUMO3-201ENST00000332859 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
SUMO3-201ENST00000332859 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
SUMO3-201ENST00000332859 NESP48681 1621 aa33.02■■■□□ 2.88
SUMO3-201ENST00000332859 BIVM-ERCC5R4GMW8 1640 aa33■■■□□ 2.87
SUMO3-201ENST00000332859 FANCD2Q9BXW9 1451 aa32.97■■■□□ 2.87
SUMO3-201ENST00000332859 CUX1P39880 1505 aa32.93■■■□□ 2.86
SUMO3-201ENST00000332859 FAM9AQ8IZU1 332 aaPredicted RBP32.91■■■□□ 2.86
SUMO3-201ENST00000332859 PDS5BQ9NTI5 1447 aa32.82■■■□□ 2.85
SUMO3-201ENST00000332859 EEA1Q15075 1411 aa32.81■■■□□ 2.84
SUMO3-201ENST00000332859 SOGA1O94964 1423 aa32.8■■■□□ 2.84
SUMO3-201ENST00000332859 CEP164Q9UPV0 1460 aa32.78■■■□□ 2.84
SUMO3-201ENST00000332859 LOC105371045A0A1W2PR82 267 aa32.76■■■□□ 2.83
SUMO3-201ENST00000332859 DNMBPQ6XZF7 1577 aa32.68■■■□□ 2.82
SUMO3-201ENST00000332859 RUSC2Q8N2Y8 1516 aa32.66■■■□□ 2.82
SUMO3-201ENST00000332859 KIF21AQ7Z4S6 1674 aa32.65■■■□□ 2.82
SUMO3-201ENST00000332859 TOPBP1Q92547 1522 aa32.6■■■□□ 2.81
SUMO3-201ENST00000332859 FGD5Q6ZNL6 1462 aa32.59■■■□□ 2.81
SUMO3-201ENST00000332859 CSRNP3Q8WYN3 585 aa32.58■■■□□ 2.81
SUMO3-201ENST00000332859 URB2Q14146 1524 aaKnown RBP32.55■■■□□ 2.8
SUMO3-201ENST00000332859 KIF27Q86VH2 1401 aa32.45■■■□□ 2.79
SUMO3-201ENST00000332859 POLA1P09884 1462 aaPredicted RBP32.43■■■□□ 2.78
SUMO3-201ENST00000332859 MRC2Q9UBG0 1479 aa32.41■■■□□ 2.78
SUMO3-201ENST00000332859 EHMT2Q96KQ7 1210 aa32.41■■■□□ 2.78
SUMO3-201ENST00000332859 KIF21BO75037 1637 aa32.37■■■□□ 2.77
SUMO3-201ENST00000332859 CUX2O14529 1486 aa32.36■■■□□ 2.77
SUMO3-201ENST00000332859 GOLGA3Q08378 1498 aa32.34■■■□□ 2.77
SUMO3-201ENST00000332859 ERCC6Q03468 1493 aa32.32■■■□□ 2.76
SUMO3-201ENST00000332859 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
SUMO3-201ENST00000332859 RAD54L2Q9Y4B4 1467 aa32.3■■■□□ 2.76
SUMO3-201ENST00000332859 WDR62O43379 1518 aa32.24■■■□□ 2.75
SUMO3-201ENST00000332859 WDR97A6NE52 1622 aa32.22■■■□□ 2.75
SUMO3-201ENST00000332859 TNIKQ9UKE5 1360 aa32.2■■■□□ 2.75
SUMO3-201ENST00000332859 PRXQ9BXM0 1461 aa32.2■■■□□ 2.75
SUMO3-201ENST00000332859 ERICH3Q5RHP9 1530 aa32.17■■■□□ 2.74
SUMO3-201ENST00000332859 RAPGEF2Q9Y4G8 1499 aa32.15■■■□□ 2.74
SUMO3-201ENST00000332859 THOC2Q8NI27 1593 aaKnown RBP32.15■■■□□ 2.74
SUMO3-201ENST00000332859 UBTFP17480 764 aaKnown RBP32.14■■■□□ 2.74
SUMO3-201ENST00000332859 IGF1RP08069 1367 aa32.13■■■□□ 2.73
SUMO3-201ENST00000332859 TARBP1Q13395 1621 aaKnown RBP32.12■■■□□ 2.73
SUMO3-201ENST00000332859 ABCA5Q8WWZ7 1642 aa32.06■■■□□ 2.72
SUMO3-201ENST00000332859 CEP162Q5TB80 1403 aa32.02■■■□□ 2.72
SUMO3-201ENST00000332859 IFT140Q96RY7 1462 aa32.01■■■□□ 2.72
SUMO3-201ENST00000332859 TDRD9Q8NDG6 1382 aaKnown RBP31.99■■■□□ 2.71
SUMO3-201ENST00000332859 CARMIL1Q5VZK9 1371 aa31.98■■■□□ 2.71
SUMO3-201ENST00000332859 GAPVD1Q14C86 1478 aa31.98■■■□□ 2.71
SUMO3-201ENST00000332859 CUL7Q14999 1698 aa31.96■■■□□ 2.71
SUMO3-201ENST00000332859 PBRM1Q86U86 1689 aa31.82■■■□□ 2.68
SUMO3-201ENST00000332859 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.683e-7■■■□□ 16.9
SUMO3-201ENST00000332859 CLIP1P30622 1438 aa31.79■■■□□ 2.68
SUMO3-201ENST00000332859 ZNF608Q9ULD9 1512 aaPredicted RBP31.78■■■□□ 2.68
SUMO3-201ENST00000332859 GRIN2BQ13224 1484 aa31.75■■■□□ 2.67
SUMO3-201ENST00000332859 EIF4G3O43432 1585 aaKnown RBP31.71■■■□□ 2.67
SUMO3-201ENST00000332859 PCGF6Q9BYE7 350 aa31.65■■■□□ 2.66
SUMO3-201ENST00000332859 ADAMTS12P58397 1594 aa31.65■■■□□ 2.66
SUMO3-201ENST00000332859 FHAD1B1AJZ9 1412 aa31.65■■■□□ 2.66
SUMO3-201ENST00000332859 RANGAP1P46060 587 aaPredicted RBP31.6■■■□□ 2.65
SUMO3-201ENST00000332859 CTTNBP2Q8WZ74 1663 aa31.57■■■□□ 2.64
SUMO3-201ENST00000332859 SNAPC4Q5SXM2 1469 aa31.54■■■□□ 2.64
SUMO3-201ENST00000332859 VPS8Q8N3P4 1428 aa31.52■■■□□ 2.64
SUMO3-201ENST00000332859 TRIM26Q12899 539 aaPredicted RBP31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms