RNA–Protein interactions for RNA: ENST00000618010.4

RAB4A-205, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB4A, Length 2,799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-205ENST00000618010 NISCHQ9Y2I1 1504 aa37.34■■■■□ 3.57
RAB4A-205ENST00000618010 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.69
RAB4A-205ENST00000618010 SHROOM4Q9ULL8 1493 aa31.77■■■□□ 2.68
RAB4A-205ENST00000618010 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
RAB4A-205ENST00000618010 ZCCHC6Q5VYS8 1495 aaKnown RBP31.44■■■□□ 2.62
RAB4A-205ENST00000618010 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
RAB4A-205ENST00000618010 HRCP23327 699 aa31.02■■■□□ 2.56
RAB4A-205ENST00000618010 PPARGC1BQ86YN6 1023 aaKnown RBP30.67■■■□□ 2.5
RAB4A-205ENST00000618010 PCGF6Q9BYE7 350 aa30.66■■■□□ 2.5
RAB4A-205ENST00000618010 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
RAB4A-205ENST00000618010 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
RAB4A-205ENST00000618010 ABCC9O60706 1549 aa30.35■■■□□ 2.45
RAB4A-205ENST00000618010 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
RAB4A-205ENST00000618010 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
RAB4A-205ENST00000618010 LOC105371045A0A1W2PR82 267 aa29.79■■■□□ 2.36
RAB4A-205ENST00000618010 NACADO15069 1562 aa29.65■■■□□ 2.34
RAB4A-205ENST00000618010 PELP1Q8IZL8 1130 aaKnown RBP29.57■■■□□ 2.32
RAB4A-205ENST00000618010 TRIM26Q12899 539 aaPredicted RBP29.47■■■□□ 2.31
RAB4A-205ENST00000618010 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
RAB4A-205ENST00000618010 SCAF1Q9H7N4 1312 aaKnown RBP29.41■■■□□ 2.3
RAB4A-205ENST00000618010 RB1CC1Q8TDY2 1594 aa29.32■■■□□ 2.28
RAB4A-205ENST00000618010 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
RAB4A-205ENST00000618010 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
RAB4A-205ENST00000618010 ZEB1P37275 1124 aaPredicted RBP29.08■■■□□ 2.25
RAB4A-205ENST00000618010 PABPN1Q86U42 306 aaKnown RBP eCLIP29.03■■■□□ 2.24
RAB4A-205ENST00000618010 WIZO95785 1651 aa28.87■■■□□ 2.21
RAB4A-205ENST00000618010 EHMT2Q96KQ7 1210 aa28.85■■■□□ 2.21
RAB4A-205ENST00000618010 UNC13AQ9UPW8 1703 aa28.85■■■□□ 2.21
RAB4A-205ENST00000618010 FAM9AQ8IZU1 332 aaPredicted RBP28.78■■■□□ 2.2
RAB4A-205ENST00000618010 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
RAB4A-205ENST00000618010 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
RAB4A-205ENST00000618010 NEUROD1Q13562 356 aa28.67■■■□□ 2.18
RAB4A-205ENST00000618010 ACIN1Q9UKV3 1341 aaKnown RBP28.64■■■□□ 2.17
RAB4A-205ENST00000618010 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
RAB4A-205ENST00000618010 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
RAB4A-205ENST00000618010 GTF3C3Q9Y5Q9 886 aa28.52■■■□□ 2.16
RAB4A-205ENST00000618010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.46■■■□□ 2.15
RAB4A-205ENST00000618010 CCER1Q8TC90 406 aaPredicted RBP28.35■■■□□ 2.13
RAB4A-205ENST00000618010 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
RAB4A-205ENST00000618010 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
RAB4A-205ENST00000618010 MYT1Q01538 1121 aa28.28■■■□□ 2.12
RAB4A-205ENST00000618010 DIEXFQ68CQ4 756 aaKnown RBP28.27■■■□□ 2.12
RAB4A-205ENST00000618010 CENPBP07199 599 aaPredicted RBP28.25■■■□□ 2.11
RAB4A-205ENST00000618010 SMARCA2P51531 1590 aa28.19■■■□□ 2.1
RAB4A-205ENST00000618010 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
RAB4A-205ENST00000618010 TTBK1Q5TCY1 1321 aaPredicted RBP28.1■■■□□ 2.09
RAB4A-205ENST00000618010 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
RAB4A-205ENST00000618010 YTHDC1Q96MU7 727 aaKnown RBP28.03■■■□□ 2.08
RAB4A-205ENST00000618010 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
RAB4A-205ENST00000618010 BAZ1BQ9UIG0 1483 aaKnown RBP27.92■■■□□ 2.06
RAB4A-205ENST00000618010 PEG3Q9GZU2 1588 aa27.91■■■□□ 2.06
RAB4A-205ENST00000618010 SOGA1O94964 1423 aa27.76■■■□□ 2.03
RAB4A-205ENST00000618010 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
RAB4A-205ENST00000618010 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
RAB4A-205ENST00000618010 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.02
RAB4A-205ENST00000618010 MIER1Q8N108 512 aa27.61■■■□□ 2.01
RAB4A-205ENST00000618010 CSRNP3Q8WYN3 585 aa27.53■■■□□ 2
RAB4A-205ENST00000618010 NCAPD3P42695 1498 aa27.51■■□□□ 1.99
RAB4A-205ENST00000618010 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
RAB4A-205ENST00000618010 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
RAB4A-205ENST00000618010 HMGXB3Q12766 1538 aa27.38■■□□□ 1.97
RAB4A-205ENST00000618010 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
RAB4A-205ENST00000618010 CEP162Q5TB80 1403 aa27.29■■□□□ 1.96
RAB4A-205ENST00000618010 RANGAP1P46060 587 aaPredicted RBP27.28■■□□□ 1.96
RAB4A-205ENST00000618010 EEA1Q15075 1411 aa27.27■■□□□ 1.96
RAB4A-205ENST00000618010 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
RAB4A-205ENST00000618010 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
RAB4A-205ENST00000618010 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
RAB4A-205ENST00000618010 CFTRP13569 1480 aa27.15■■□□□ 1.94
RAB4A-205ENST00000618010 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
RAB4A-205ENST00000618010 CUX1P39880 1505 aa27.09■■□□□ 1.93
RAB4A-205ENST00000618010 SUPT16HQ9Y5B9 1047 aaKnown RBP27.08■■□□□ 1.93
RAB4A-205ENST00000618010 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
RAB4A-205ENST00000618010 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
RAB4A-205ENST00000618010 CADPSQ9ULU8 1353 aa27.02■■□□□ 1.92
RAB4A-205ENST00000618010 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
RAB4A-205ENST00000618010 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
RAB4A-205ENST00000618010 TSHZ2Q9NRE2 1034 aa26.95■■□□□ 1.9
RAB4A-205ENST00000618010 KIF21BO75037 1637 aa26.93■■□□□ 1.9
RAB4A-205ENST00000618010 CLIP1P30622 1438 aa26.91■■□□□ 1.9
RAB4A-205ENST00000618010 ANP32EQ9BTT0 268 aa26.9■■□□□ 1.9
RAB4A-205ENST00000618010 NESP48681 1621 aa26.86■■□□□ 1.89
RAB4A-205ENST00000618010 BCL11AQ9H165 835 aa26.84■■□□□ 1.89
RAB4A-205ENST00000618010 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
RAB4A-205ENST00000618010 BCANQ96GW7 911 aa26.77■■□□□ 1.88
RAB4A-205ENST00000618010 PRXQ9BXM0 1461 aa26.76■■□□□ 1.88
RAB4A-205ENST00000618010 FANCD2Q9BXW9 1451 aa26.76■■□□□ 1.88
RAB4A-205ENST00000618010 CUX2O14529 1486 aa26.76■■□□□ 1.87
RAB4A-205ENST00000618010 FGD5Q6ZNL6 1462 aa26.72■■□□□ 1.87
RAB4A-205ENST00000618010 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
RAB4A-205ENST00000618010 CLSPNQ9HAW4 1339 aa26.67■■□□□ 1.86
RAB4A-205ENST00000618010 APLP2Q06481 763 aa26.67■■□□□ 1.86
RAB4A-205ENST00000618010 VPS8Q8N3P4 1428 aa26.66■■□□□ 1.86
RAB4A-205ENST00000618010 KCNH8Q96L42 1107 aa26.65■■□□□ 1.86
RAB4A-205ENST00000618010 IGF1RP08069 1367 aa26.64■■□□□ 1.85
RAB4A-205ENST00000618010 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
RAB4A-205ENST00000618010 ERICH3Q5RHP9 1530 aa26.59■■□□□ 1.85
RAB4A-205ENST00000618010 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
RAB4A-205ENST00000618010 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
RAB4A-205ENST00000618010 TOPBP1Q92547 1522 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms