RNA–Protein interactions for RNA: ENST00000553059.1

NTN4-207, Transcript of netrin 4, humanhuman

TSL 1 (best) BASIC

Gene NTN4, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTN4-207ENST00000553059 NISCHQ9Y2I1 1504 aa47.83■■■■■ 5.25
NTN4-207ENST00000553059 CCDC180Q9P1Z9 1646 aa41.87■■■■■ 4.29
NTN4-207ENST00000553059 ZCCHC6Q5VYS8 1495 aaKnown RBP40.12■■■■■ 4.01
NTN4-207ENST00000553059 ABCC9O60706 1549 aa39.89■■■■□ 3.98
NTN4-207ENST00000553059 DCAF8L2P0C7V8 631 aa39.63■■■■□ 3.94
NTN4-207ENST00000553059 DCAF1Q9Y4B6 1507 aa39.54■■■■□ 3.92
NTN4-207ENST00000553059 MYO15BQ96JP2 1530 aa39.19■■■■□ 3.86
NTN4-207ENST00000553059 NACADO15069 1562 aa39.06■■■■□ 3.84
NTN4-207ENST00000553059 SHROOM4Q9ULL8 1493 aa38.82■■■■□ 3.8
NTN4-207ENST00000553059 RB1CC1Q8TDY2 1594 aa38.81■■■■□ 3.8
NTN4-207ENST00000553059 SCRIBQ14160 1630 aa38.48■■■■□ 3.75
NTN4-207ENST00000553059 UNC13AQ9UPW8 1703 aa38.01■■■■□ 3.67
NTN4-207ENST00000553059 BICRAQ9NZM4 1560 aa37.64■■■■□ 3.62
NTN4-207ENST00000553059 PABPN1Q86U42 306 aaKnown RBP eCLIP37.55■■■■□ 3.6
NTN4-207ENST00000553059 CECR2Q9BXF3 1484 aa37.2■■■■□ 3.55
NTN4-207ENST00000553059 SUPT5HO00267 1087 aaKnown RBP37.18■■■■□ 3.54
NTN4-207ENST00000553059 RSF1Q96T23 1441 aaPredicted RBP36.99■■■■□ 3.51
NTN4-207ENST00000553059 BAZ1AQ9NRL2 1556 aaPredicted RBP36.97■■■■□ 3.51
NTN4-207ENST00000553059 MROH2BQ7Z745 1585 aa36.95■■■■□ 3.51
NTN4-207ENST00000553059 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
NTN4-207ENST00000553059 WIZO95785 1651 aa36.63■■■■□ 3.45
NTN4-207ENST00000553059 EIF4G1Q04637 1599 aaKnown RBP36.55■■■■□ 3.44
NTN4-207ENST00000553059 PEG3Q9GZU2 1588 aa36.39■■■■□ 3.42
NTN4-207ENST00000553059 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
NTN4-207ENST00000553059 SMARCA2P51531 1590 aa36.29■■■■□ 3.4
NTN4-207ENST00000553059 TOP2AP11388 1531 aaKnown RBP36.25■■■■□ 3.39
NTN4-207ENST00000553059 BAZ1BQ9UIG0 1483 aaKnown RBP36.11■■■■□ 3.37
NTN4-207ENST00000553059 CC2D2AQ9P2K1 1620 aa36.09■■■■□ 3.37
NTN4-207ENST00000553059 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
NTN4-207ENST00000553059 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
NTN4-207ENST00000553059 CCDC88BA6NC98 1476 aa35.86■■■■□ 3.33
NTN4-207ENST00000553059 DNAJC5BQ9UF47 199 aa35.44■■■■□ 3.26
NTN4-207ENST00000553059 CHIC1Q5VXU3 224 aa35.4■■■■□ 3.26
NTN4-207ENST00000553059 CFTRP13569 1480 aa35.17■■■■□ 3.22
NTN4-207ENST00000553059 CADPSQ9ULU8 1353 aa35.11■■■■□ 3.21
NTN4-207ENST00000553059 ABCC8Q09428 1581 aa35.03■■■■□ 3.2
NTN4-207ENST00000553059 TRIM41Q8WV44 630 aa34.98■■■■□ 3.19
NTN4-207ENST00000553059 PRDM2Q13029 1718 aa34.96■■■■□ 3.19
NTN4-207ENST00000553059 NESP48681 1621 aa34.92■■■■□ 3.18
NTN4-207ENST00000553059 LAMC3Q9Y6N6 1575 aa34.89■■■■□ 3.18
NTN4-207ENST00000553059 WRNQ14191 1432 aaPredicted RBP eCLIP34.84■■■■□ 3.17
NTN4-207ENST00000553059 FANCD2Q9BXW9 1451 aa34.74■■■■□ 3.15
NTN4-207ENST00000553059 SYNJ1O43426 1573 aa34.71■■■■□ 3.15
NTN4-207ENST00000553059 PDS5BQ9NTI5 1447 aa34.63■■■■□ 3.13
NTN4-207ENST00000553059 TOP2BQ02880 1626 aa34.58■■■■□ 3.13
NTN4-207ENST00000553059 CUX1P39880 1505 aa34.57■■■■□ 3.13
NTN4-207ENST00000553059 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
NTN4-207ENST00000553059 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
NTN4-207ENST00000553059 KIF21AQ7Z4S6 1674 aa34.49■■■■□ 3.11
NTN4-207ENST00000553059 DNMBPQ6XZF7 1577 aa34.36■■■■□ 3.09
NTN4-207ENST00000553059 FAM9AQ8IZU1 332 aaPredicted RBP34.34■■■■□ 3.09
NTN4-207ENST00000553059 TOPBP1Q92547 1522 aa34.32■■■■□ 3.08
NTN4-207ENST00000553059 URB2Q14146 1524 aaKnown RBP34.32■■■■□ 3.08
NTN4-207ENST00000553059 SOGA1O94964 1423 aa34.29■■■■□ 3.08
NTN4-207ENST00000553059 FGD5Q6ZNL6 1462 aa34.25■■■■□ 3.07
NTN4-207ENST00000553059 ERCC6Q03468 1493 aa34.25■■■■□ 3.07
NTN4-207ENST00000553059 MRC2Q9UBG0 1479 aa34.21■■■■□ 3.07
NTN4-207ENST00000553059 RUSC2Q8N2Y8 1516 aa34.18■■■■□ 3.06
NTN4-207ENST00000553059 EEA1Q15075 1411 aa34.15■■■■□ 3.06
NTN4-207ENST00000553059 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
NTN4-207ENST00000553059 LOC105371045A0A1W2PR82 267 aa34.04■■■■□ 3.04
NTN4-207ENST00000553059 WDR62O43379 1518 aa34.04■■■■□ 3.04
NTN4-207ENST00000553059 RAD54L2Q9Y4B4 1467 aa34.02■■■■□ 3.04
NTN4-207ENST00000553059 THOC2Q8NI27 1593 aaKnown RBP34.01■■■■□ 3.03
NTN4-207ENST00000553059 CSRNP3Q8WYN3 585 aa34■■■■□ 3.03
NTN4-207ENST00000553059 KIF27Q86VH2 1401 aa33.98■■■■□ 3.03
NTN4-207ENST00000553059 CUX2O14529 1486 aa33.97■■■■□ 3.03
NTN4-207ENST00000553059 ABCA10Q8WWZ4 1543 aa33.92■■■■□ 3.02
NTN4-207ENST00000553059 EHMT2Q96KQ7 1210 aa33.88■■■■□ 3.01
NTN4-207ENST00000553059 WDR97A6NE52 1622 aa33.85■■■■□ 3.01
NTN4-207ENST00000553059 TARBP1Q13395 1621 aaKnown RBP33.83■■■■□ 3.01
NTN4-207ENST00000553059 IFT140Q96RY7 1462 aa33.74■■■□□ 2.99
NTN4-207ENST00000553059 KIF21BO75037 1637 aa33.73■■■□□ 2.99
NTN4-207ENST00000553059 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
NTN4-207ENST00000553059 IGF1RP08069 1367 aa33.69■■■□□ 2.98
NTN4-207ENST00000553059 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
NTN4-207ENST00000553059 GOLGA3Q08378 1498 aa33.68■■■□□ 2.98
NTN4-207ENST00000553059 PRXQ9BXM0 1461 aa33.66■■■□□ 2.98
NTN4-207ENST00000553059 GAPVD1Q14C86 1478 aa33.64■■■□□ 2.98
NTN4-207ENST00000553059 RAPGEF2Q9Y4G8 1499 aa33.61■■■□□ 2.97
NTN4-207ENST00000553059 ERICH3Q5RHP9 1530 aa33.57■■■□□ 2.96
NTN4-207ENST00000553059 ZNF608Q9ULD9 1512 aaPredicted RBP33.57■■■□□ 2.96
NTN4-207ENST00000553059 UBTFP17480 764 aaKnown RBP33.56■■■□□ 2.96
NTN4-207ENST00000553059 AQRO60306 1485 aaKnown RBP eCLIP33.55■■■□□ 2.96
NTN4-207ENST00000553059 CARMIL1Q5VZK9 1371 aa33.53■■■□□ 2.96
NTN4-207ENST00000553059 TNIKQ9UKE5 1360 aa33.49■■■□□ 2.95
NTN4-207ENST00000553059 CUL7Q14999 1698 aa33.48■■■□□ 2.95
NTN4-207ENST00000553059 PBRM1Q86U86 1689 aa33.47■■■□□ 2.95
NTN4-207ENST00000553059 EIF4G3O43432 1585 aaKnown RBP33.46■■■□□ 2.95
NTN4-207ENST00000553059 GRIN2BQ13224 1484 aa33.43■■■□□ 2.94
NTN4-207ENST00000553059 CEP162Q5TB80 1403 aa33.31■■■□□ 2.92
NTN4-207ENST00000553059 ADAMTS12P58397 1594 aa33.28■■■□□ 2.92
NTN4-207ENST00000553059 FHAD1B1AJZ9 1412 aa33.27■■■□□ 2.92
NTN4-207ENST00000553059 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
NTN4-207ENST00000553059 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
NTN4-207ENST00000553059 CLIP1P30622 1438 aa33.14■■■□□ 2.9
NTN4-207ENST00000553059 RANGAP1P46060 587 aaPredicted RBP33.13■■■□□ 2.89
NTN4-207ENST00000553059 CTTNBP2Q8WZ74 1663 aa33.07■■■□□ 2.88
NTN4-207ENST00000553059 SYNJ2O15056 1496 aa33.05■■■□□ 2.88
NTN4-207ENST00000553059 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms