Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 RPS24AYER074W 408 nt2.32□□□□□ -2.04
RPA49Q01080 RPL9AYGL147C 576 nt2.32□□□□□ -2.04
RPA49Q01080 RPS22BYLR367W 393 nt2.32□□□□□ -2.04
RPA49Q01080 SAK1YER129W 3429 nt2.32□□□□□ -2.04
RPA49Q01080 PUT3YKL015W 2940 nt2.32□□□□□ -2.04
RPA49Q01080 MSL5YLR116W 1431 nt2.32□□□□□ -2.04
RPA49Q01080 PHO2YDL106C 1680 nt2.31□□□□□ -2.04
RPA49Q01080 ALK2YBL009W 2031 nt2.31□□□□□ -2.04
RPA49Q01080 NCL1YBL024W 2055 nt2.31□□□□□ -2.04
RPA49Q01080 YGR290WYGR290W 444 nt2.31□□□□□ -2.04
RPA49Q01080 YJL052C-AYJL052C-A 120 nt2.31□□□□□ -2.04
RPA49Q01080 ATP7YKL016C 525 nt2.31□□□□□ -2.04
RPA49Q01080 REV1YOR346W 2958 nt2.31□□□□□ -2.04
RPA49Q01080 JID1YPR061C 906 nt2.31□□□□□ -2.04
RPA49Q01080 TAE2YPL009C 3117 nt2.31□□□□□ -2.04
RPA49Q01080 IRA2YOL081W 9240 nt2.3□□□□□ -2.04
RPA49Q01080 UFD4YKL010C 4452 nt2.3□□□□□ -2.04
RPA49Q01080 YOL098CYOL098C 3114 nt2.3□□□□□ -2.04
RPA49Q01080 SMB1YER029C 591 nt2.3□□□□□ -2.04
RPA49Q01080 YJR140W-AYJR140W-A 150 nt2.3□□□□□ -2.04
RPA49Q01080 SHE2YKL130C 741 nt2.3□□□□□ -2.04
RPA49Q01080 PRK1YIL095W 2433 nt2.29□□□□□ -2.04
RPA49Q01080 YDL025W-AYDL025W-A 105 nt2.29□□□□□ -2.04
RPA49Q01080 YAP3YHL009C 993 nt2.29□□□□□ -2.04
RPA49Q01080 RPL16AYIL133C 600 nt2.29□□□□□ -2.04
RPA49Q01080 CCW14YLR390W-A 717 nt2.29□□□□□ -2.04
RPA49Q01080 YNL010WYNL010W 726 nt2.29□□□□□ -2.04
RPA49Q01080 NOP15YNL110C 663 nt2.29□□□□□ -2.04
RPA49Q01080 MSS18YPR134W 807 nt2.29□□□□□ -2.04
RPA49Q01080 YFR016CYFR016C 3702 nt2.29□□□□□ -2.04
RPA49Q01080 SAP185YJL098W 3177 nt2.29□□□□□ -2.04
RPA49Q01080 MXR1YER042W 555 nt2.28□□□□□ -2.04
RPA49Q01080 BRP1YGL007W 378 nt2.28□□□□□ -2.04
RPA49Q01080 PET191YJR034W 327 nt2.28□□□□□ -2.04
RPA49Q01080 YKL111CYKL111C 336 nt2.28□□□□□ -2.04
RPA49Q01080 RPS7BYNL096C 573 nt2.28□□□□□ -2.04
RPA49Q01080 YNL122CYNL122C 348 nt2.28□□□□□ -2.04
RPA49Q01080 YPK1YKL126W 2043 nt2.28□□□□□ -2.04
RPA49Q01080 YRB1YDR002W 606 nt2.27□□□□□ -2.05
RPA49Q01080 BNA7YDR428C 786 nt2.27□□□□□ -2.05
RPA49Q01080 MZM1YDR493W 372 nt2.27□□□□□ -2.05
RPA49Q01080 TIM9YEL020W-A 264 nt2.27□□□□□ -2.05
RPA49Q01080 RPL40AYIL148W 387 nt2.27□□□□□ -2.05
RPA49Q01080 TIM8YJR135W-A 264 nt2.27□□□□□ -2.05
RPA49Q01080 PAU8YAL068C 363 nt2.27□□□□□ -2.05
RPA49Q01080 ICY1YMR195W 384 nt2.27□□□□□ -2.05
RPA49Q01080 GPI15YNL038W 690 nt2.27□□□□□ -2.05
RPA49Q01080 PAU20YOL161C 363 nt2.27□□□□□ -2.05
RPA49Q01080 CDC50YCR094W 1176 nt2.26□□□□□ -2.05
RPA49Q01080 YDL068WYDL068W 330 nt2.26□□□□□ -2.05
RPA49Q01080 YDR194W-AYDR194W-A 153 nt2.26□□□□□ -2.05
RPA49Q01080 YPS5YGL259W 498 nt2.26□□□□□ -2.05
RPA49Q01080 RMP1YLR145W 606 nt2.26□□□□□ -2.05
RPA49Q01080 PKR1YMR123W 369 nt2.26□□□□□ -2.05
RPA49Q01080 PBI2YNL015W 228 nt2.26□□□□□ -2.05
RPA49Q01080 ATP3YBR039W 936 nt2.26□□□□□ -2.05
RPA49Q01080 BRE1YDL074C 2103 nt2.26□□□□□ -2.05
RPA49Q01080 SPE1YKL184W 1401 nt2.25□□□□□ -2.05
RPA49Q01080 IRC8YJL051W 2469 nt2.25□□□□□ -2.05
RPA49Q01080 YHR130CYHR130C 336 nt2.25□□□□□ -2.05
RPA49Q01080 YJL127C-BYJL127C-B 159 nt2.25□□□□□ -2.05
RPA49Q01080 YKL068W-AYKL068W-A 237 nt2.25□□□□□ -2.05
RPA49Q01080 YLR031WYLR031W 561 nt2.25□□□□□ -2.05
RPA49Q01080 KAP123YER110C 3342 nt2.25□□□□□ -2.05
RPA49Q01080 SOK2YMR016C 2358 nt2.24□□□□□ -2.05
RPA49Q01080 MRP10YDL045W-A 288 nt2.24□□□□□ -2.05
RPA49Q01080 BIG1YHR101C 1008 nt2.24□□□□□ -2.05
RPA49Q01080 YLR202CYLR202C 327 nt2.24□□□□□ -2.05
RPA49Q01080 RPS17AYML024W 411 nt2.24□□□□□ -2.05
RPA49Q01080 ATP15YPL271W 189 nt2.24□□□□□ -2.05
RPA49Q01080 YHR214C-CYHR214C-C 1437 nt2.24□□□□□ -2.05
RPA49Q01080 BNI1YNL271C 5862 nt2.23□□□□□ -2.05
RPA49Q01080 YJL016WYJL016W 1686 nt2.23□□□□□ -2.05
RPA49Q01080 YLR379WYLR379W 375 nt2.23□□□□□ -2.05
RPA49Q01080 YLR456WYLR456W 615 nt2.23□□□□□ -2.05
RPA49Q01080 VTI1YMR197C 654 nt2.23□□□□□ -2.05
RPA49Q01080 LSM7YNL147W 348 nt2.23□□□□□ -2.05
RPA49Q01080 ATX2YOR079C 942 nt2.23□□□□□ -2.05
RPA49Q01080 IRC16YPR038W 360 nt2.23□□□□□ -2.05
RPA49Q01080 UBP15YMR304W 3693 nt2.23□□□□□ -2.05
RPA49Q01080 NUP82YJL061W 2142 nt2.23□□□□□ -2.05
RPA49Q01080 KOG1YHR186C 4674 nt2.23□□□□□ -2.05
RPA49Q01080 RAV1YJR033C 4074 nt2.22□□□□□ -2.05
RPA49Q01080 ATG11YPR049C 3537 nt2.22□□□□□ -2.05
RPA49Q01080 UBR1YGR184C 5853 nt2.22□□□□□ -2.05
RPA49Q01080 YFH1YDL120W 525 nt2.22□□□□□ -2.05
RPA49Q01080 MPH1YIR002C 2982 nt2.22□□□□□ -2.05
RPA49Q01080 CTK3YML112W 891 nt2.22□□□□□ -2.05
RPA49Q01080 GAL7YBR018C 1101 nt2.22□□□□□ -2.05
RPA49Q01080 CSF1YLR087C 8877 nt2.22□□□□□ -2.05
RPA49Q01080 AFI1YOR129C 2682 nt2.22□□□□□ -2.05
RPA49Q01080 YJL181WYJL181W 1836 nt2.21□□□□□ -2.05
RPA49Q01080 SSQ1YLR369W 1974 nt2.21□□□□□ -2.05
RPA49Q01080 YBR012W-AYBR012W-A 1323 nt2.21□□□□□ -2.06
RPA49Q01080 YOR142W-AYOR142W-A 1323 nt2.21□□□□□ -2.06
RPA49Q01080 YPR158W-AYPR158W-A 1323 nt2.21□□□□□ -2.06
RPA49Q01080 YEL018C-AYEL018C-A 534 nt2.21□□□□□ -2.06
RPA49Q01080 EMP24YGL200C 612 nt2.21□□□□□ -2.06
RPA49Q01080 YGR045CYGR045C 363 nt2.21□□□□□ -2.06
RPA49Q01080 UTP30YKR060W 825 nt2.21□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 87.8 ms