RNA–Protein interactions for RNA: YOR129C

AFI1, Transcript of Arf3p polarization-specific docking factor, yeastyeast

Gene AFI1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFI1YOR129C DRS1P32892 752 aaKnown RBP6.05□□□□□ -1.44
AFI1YOR129C MTC1P47018 478 aaKnown RBP5.76□□□□□ -1.49
AFI1YOR129C BFR2Q06631 534 aaKnown RBP5.34□□□□□ -1.55
AFI1YOR129C TFA1P36100 482 aa5.21□□□□□ -1.57
AFI1YOR129C FAP1P53971 965 aa5.15□□□□□ -1.59
AFI1YOR129C AVT3P36062 692 aa5.09□□□□□ -1.59
AFI1YOR129C DIP2Q12220 943 aaPredicted RBP5.07□□□□□ -1.6
AFI1YOR129C PRY3P47033 881 aa4.88□□□□□ -1.63
AFI1YOR129C AAD16Q02895 342 aa4.76□□□□□ -1.65
AFI1YOR129C PRI1P10363 409 aa4.74□□□□□ -1.65
AFI1YOR129C YCK3P39962 524 aa4.73□□□□□ -1.65
AFI1YOR129C RSE1Q04693 1361 aaKnown RBP4.68□□□□□ -1.66
AFI1YOR129C ISW2Q08773 1120 aa4.68□□□□□ -1.66
AFI1YOR129C RQC2Q12532 1038 aaKnown RBP4.61□□□□□ -1.67
AFI1YOR129C RPG1P38249 964 aaKnown RBP4.6□□□□□ -1.67
AFI1YOR129C HAA1Q12753 694 aaKnown RBP4.54□□□□□ -1.68
AFI1YOR129C RPL17AP05740 184 aaKnown RBP4.5□□□□□ -1.69
AFI1YOR129C RPL17BP46990 184 aaKnown RBP4.5□□□□□ -1.69
AFI1YOR129C TSR3Q12094 313 aaKnown RBP4.49□□□□□ -1.69
AFI1YOR129C DMA1P38823 416 aa4.41□□□□□ -1.7
AFI1YOR129C REB1P21538 810 aa4.41□□□□□ -1.7
AFI1YOR129C PTP3P40048 928 aa4.39□□□□□ -1.71
AFI1YOR129C SPT21P35209 758 aa4.39□□□□□ -1.71
AFI1YOR129C RIM101P33400 625 aa4.37□□□□□ -1.71
AFI1YOR129C MRPL32P25348 183 aa4.35□□□□□ -1.71
AFI1YOR129C SSP1P38871 571 aa4.28□□□□□ -1.72
AFI1YOR129C OXP1P28273 1286 aa4.27□□□□□ -1.73
AFI1YOR129C YAH1Q12184 172 aaKnown RBP4.22□□□□□ -1.73
AFI1YOR129C YKR023WP36119 530 aaKnown RBP4.19□□□□□ -1.74
AFI1YOR129C YLR271WQ06152 274 aa4.19□□□□□ -1.74
AFI1YOR129C YGL015CP33199 130 aa4.19□□□□□ -1.74
AFI1YOR129C TAF7Q05021 590 aa4.17□□□□□ -1.74
AFI1YOR129C YIL055CP40523 627 aaKnown RBP4.16□□□□□ -1.74
AFI1YOR129C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.15□□□□□ -1.74not detected
AFI1YOR129C LEO1P38439 464 aa4.12□□□□□ -1.75
AFI1YOR129C HOP09932 586 aa4.1□□□□□ -1.75
AFI1YOR129C MGA2P40578 1113 aa4.1□□□□□ -1.75
AFI1YOR129C RSM7P47150 247 aa4.1□□□□□ -1.75
AFI1YOR129C TFC8Q12308 588 aa4.09□□□□□ -1.75
AFI1YOR129C DCD1P06773 312 aa4.09□□□□□ -1.75
AFI1YOR129C CST9Q06032 482 aa4.09□□□□□ -1.75
AFI1YOR129C SAS10Q12136 610 aaPredicted RBP4.09□□□□□ -1.75
AFI1YOR129C BUD31P25337 157 aaPredicted RBP4.07□□□□□ -1.76
AFI1YOR129C CDC27P38042 758 aa4.06□□□□□ -1.76
AFI1YOR129C PSD2P53037 1138 aaKnown RBP4.04□□□□□ -1.76
AFI1YOR129C LEU3P08638 886 aa4.03□□□□□ -1.76
AFI1YOR129C AI2P03876 854 aa4.02□□□□□ -1.77
AFI1YOR129C BCH2P36122 765 aa4□□□□□ -1.77
AFI1YOR129C UBP10P53874 792 aaPredicted RBP3.99□□□□□ -1.77
AFI1YOR129C RAM2P29703 316 aa3.96□□□□□ -1.78
AFI1YOR129C MAP2P38174 421 aaKnown RBP3.96□□□□□ -1.78
AFI1YOR129C BBC1P47068 1157 aa3.95□□□□□ -1.78
AFI1YOR129C RCR1P38212 213 aa3.94□□□□□ -1.78
AFI1YOR129C EPS1P40557 701 aa3.93□□□□□ -1.78
AFI1YOR129C SET1P38827 1080 aaKnown RBP3.92□□□□□ -1.78
AFI1YOR129C MRM1P25270 412 aa3.92□□□□□ -1.78
AFI1YOR129C BDF1P35817 686 aa3.91□□□□□ -1.78
AFI1YOR129C RPN1P38764 993 aaKnown RBP3.88□□□□□ -1.79
AFI1YOR129C DMA2P53924 522 aa3.88□□□□□ -1.79
AFI1YOR129C YPR148CQ06523 435 aa3.88□□□□□ -1.79
AFI1YOR129C VPS70P47161 811 aa3.88□□□□□ -1.79
AFI1YOR129C SCY1P53009 804 aa3.88□□□□□ -1.79
AFI1YOR129C SPB4P25808 606 aaPredicted RBP3.87□□□□□ -1.79
AFI1YOR129C RTG3P38165 486 aa3.87□□□□□ -1.79
AFI1YOR129C TIF4632P39936 914 aaKnown RBP3.86□□□□□ -1.79
AFI1YOR129C CKB1P43639 278 aa3.86□□□□□ -1.79
AFI1YOR129C MAK11P20484 414 aaKnown RBP3.85□□□□□ -1.79
AFI1YOR129C SLX5P32828 619 aaKnown RBP3.85□□□□□ -1.79
AFI1YOR129C VPS29P38759 282 aa3.83□□□□□ -1.8
AFI1YOR129C IFH1P39520 1085 aa3.83□□□□□ -1.8
AFI1YOR129C TGL3P40308 642 aa3.83□□□□□ -1.8
AFI1YOR129C ABP1P15891 592 aaKnown RBP3.81□□□□□ -1.8
AFI1YOR129C DSF2P38213 736 aa3.81□□□□□ -1.8
AFI1YOR129C COQ8P27697 501 aa3.8□□□□□ -1.8
AFI1YOR129C PBS2P08018 668 aa3.8□□□□□ -1.8
AFI1YOR129C STS1P38637 319 aa3.77□□□□□ -1.81
AFI1YOR129C EDS1P38073 919 aa3.76□□□□□ -1.81
AFI1YOR129C UBP9P39967 754 aa3.76□□□□□ -1.81
AFI1YOR129C MIF2P35201 549 aa3.75□□□□□ -1.81
AFI1YOR129C YMR1P47147 688 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
AFI1YOR129C KIN1P13185 1064 aa3.75□□□□□ -1.81
AFI1YOR129C YFR006WP43590 535 aa3.74□□□□□ -1.81
AFI1YOR129C YNR021WP53723 404 aaKnown RBP3.74□□□□□ -1.81
AFI1YOR129C NOP53Q12080 455 aaKnown RBP3.74□□□□□ -1.81
AFI1YOR129C DBP1P24784 617 aaKnown RBP3.74□□□□□ -1.81
AFI1YOR129C SIS1P25294 352 aaKnown RBP3.74□□□□□ -1.81
AFI1YOR129C DIT2P21595 489 aa3.73□□□□□ -1.81
AFI1YOR129C GLC3P32775 704 aa3.73□□□□□ -1.81
AFI1YOR129C NUP42P49686 430 aaKnown RBP3.73□□□□□ -1.81
AFI1YOR129C MAM3Q12296 706 aa3.73□□□□□ -1.81
AFI1YOR129C REF2P42073 533 aaPredicted RBP3.73□□□□□ -1.81
AFI1YOR129C IES2P40154 320 aa3.72□□□□□ -1.81
AFI1YOR129C RLF2Q12495 606 aa3.72□□□□□ -1.81
AFI1YOR129C AIM7Q12156 149 aa3.71□□□□□ -1.82
AFI1YOR129C PTC3P34221 468 aaKnown RBP3.7□□□□□ -1.82
AFI1YOR129C YOR238WQ08634 303 aa3.7□□□□□ -1.82
AFI1YOR129C COX6P00427 148 aa3.69□□□□□ -1.82
AFI1YOR129C GUA1P38625 525 aaKnown RBP3.69□□□□□ -1.82
AFI1YOR129C PIB1Q06651 286 aa3.67□□□□□ -1.82
AFI1YOR129C YDR090CQ03193 310 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms