RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C MTC1P47018 478 aaKnown RBP9.36□□□□□ -0.91
SOK2YMR016C FAP1P53971 965 aa8.71□□□□□ -1.02
SOK2YMR016C DRS1P32892 752 aaKnown RBP8.47□□□□□ -1.05
SOK2YMR016C PRY3P47033 881 aa8.18□□□□□ -1.1
SOK2YMR016C AAD16Q02895 342 aa8.03□□□□□ -1.12
SOK2YMR016C PRI1P10363 409 aa8.03□□□□□ -1.12
SOK2YMR016C ISW2Q08773 1120 aa7.86□□□□□ -1.15
SOK2YMR016C RPG1P38249 964 aaKnown RBP7.73□□□□□ -1.17
SOK2YMR016C HAA1Q12753 694 aaKnown RBP7.72□□□□□ -1.17
SOK2YMR016C YCK3P39962 524 aa7.63□□□□□ -1.19
SOK2YMR016C TSR3Q12094 313 aaKnown RBP7.54□□□□□ -1.2
SOK2YMR016C DIP2Q12220 943 aaPredicted RBP7.53□□□□□ -1.2
SOK2YMR016C RSE1Q04693 1361 aaKnown RBP7.38□□□□□ -1.23
SOK2YMR016C MRPL32P25348 183 aa7.32□□□□□ -1.24
SOK2YMR016C AVT3P36062 692 aa7.17□□□□□ -1.26
SOK2YMR016C REB1P21538 810 aa7.15□□□□□ -1.26
SOK2YMR016C RPL17AP05740 184 aaKnown RBP7.13□□□□□ -1.27
SOK2YMR016C RPL17BP46990 184 aaKnown RBP7.13□□□□□ -1.27
SOK2YMR016C YGL015CP33199 130 aa7.1□□□□□ -1.27
SOK2YMR016C BFR2Q06631 534 aaKnown RBP6.94□□□□□ -1.3
SOK2YMR016C CDC27P38042 758 aa6.83□□□□□ -1.32
SOK2YMR016C SPT21P35209 758 aa6.79□□□□□ -1.32
SOK2YMR016C UBP10P53874 792 aaPredicted RBP6.76□□□□□ -1.33
SOK2YMR016C YKR023WP36119 530 aaKnown RBP6.75□□□□□ -1.33
SOK2YMR016C MAP2P38174 421 aaKnown RBP6.66□□□□□ -1.34
SOK2YMR016C TFC8Q12308 588 aa6.64□□□□□ -1.35
SOK2YMR016C HOP09932 586 aa6.61□□□□□ -1.35
SOK2YMR016C BUD31P25337 157 aaPredicted RBP6.6□□□□□ -1.35
SOK2YMR016C DCD1P06773 312 aa6.55□□□□□ -1.36
SOK2YMR016C TIF4632P39936 914 aaKnown RBP6.51□□□□□ -1.37
SOK2YMR016C RIM101P33400 625 aa6.51□□□□□ -1.37
SOK2YMR016C SCY1P53009 804 aa6.5□□□□□ -1.37
SOK2YMR016C SLX5P32828 619 aaKnown RBP6.47□□□□□ -1.37
SOK2YMR016C TGL3P40308 642 aa6.46□□□□□ -1.38
SOK2YMR016C BCH2P36122 765 aa6.4□□□□□ -1.38
SOK2YMR016C UBP9P39967 754 aa6.38□□□□□ -1.39
SOK2YMR016C SIS1P25294 352 aaKnown RBP6.28□□□□□ -1.4
SOK2YMR016C OXP1P28273 1286 aa6.25□□□□□ -1.41
SOK2YMR016C EPS1P40557 701 aa6.24□□□□□ -1.41
SOK2YMR016C YIL055CP40523 627 aaKnown RBP6.23□□□□□ -1.41
SOK2YMR016C PTP3P40048 928 aa6.22□□□□□ -1.41
SOK2YMR016C BDF1P35817 686 aa6.21□□□□□ -1.42
SOK2YMR016C MST1P07236 462 aa6.14□□□□□ -1.43
SOK2YMR016C BBC1P47068 1157 aa6.14□□□□□ -1.43
SOK2YMR016C YOR238WQ08634 303 aa6.13□□□□□ -1.43
SOK2YMR016C NSR1P27476 414 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SOK2YMR016C RSM7P47150 247 aa6.11□□□□□ -1.43
SOK2YMR016C TFA1P36100 482 aa6.1□□□□□ -1.43
SOK2YMR016C AI2P03876 854 aa6.07□□□□□ -1.44
SOK2YMR016C YAP5P40574 245 aa6.06□□□□□ -1.44
SOK2YMR016C YBL029C-AQ3E756 94 aa6.05□□□□□ -1.44
SOK2YMR016C YAH1Q12184 172 aaKnown RBP6.04□□□□□ -1.44
SOK2YMR016C VNX1P42839 908 aa6□□□□□ -1.45
SOK2YMR016C SPP1Q03012 353 aa5.96□□□□□ -1.45
SOK2YMR016C GTT3P39996 337 aa5.94□□□□□ -1.46
SOK2YMR016C WSC3Q12215 556 aa5.93□□□□□ -1.46
SOK2YMR016C YLR271WQ06152 274 aa5.93□□□□□ -1.46
SOK2YMR016C TIF11P38912 153 aaKnown RBP5.89□□□□□ -1.47
SOK2YMR016C PSD2P53037 1138 aaKnown RBP5.89□□□□□ -1.47
SOK2YMR016C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SOK2YMR016C YJL171CP46992 396 aa5.85□□□□□ -1.47
SOK2YMR016C FKH1P40466 484 aa5.84□□□□□ -1.48
SOK2YMR016C AIR2Q12476 344 aaKnown RBP5.83□□□□□ -1.48
SOK2YMR016C MRM1P25270 412 aa5.82□□□□□ -1.48
SOK2YMR016C SSP1P38871 571 aa5.82□□□□□ -1.48
SOK2YMR016C ULI1P43604 169 aa5.8□□□□□ -1.48
SOK2YMR016C MSB4Q12317 492 aa5.8□□□□□ -1.48
SOK2YMR016C EAP1P36041 632 aaKnown RBP5.79□□□□□ -1.48
SOK2YMR016C PIB1Q06651 286 aa5.79□□□□□ -1.48
SOK2YMR016C LDB19Q12502 818 aa5.78□□□□□ -1.48
SOK2YMR016C IOC2Q12072 812 aa5.77□□□□□ -1.49
SOK2YMR016C YMR1P47147 688 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SOK2YMR016C BMT6Q12291 365 aa5.74□□□□□ -1.49
SOK2YMR016C MGA2P40578 1113 aa5.73□□□□□ -1.49
SOK2YMR016C RTG3P38165 486 aa5.72□□□□□ -1.49
SOK2YMR016C YOL036WQ08206 761 aa5.71□□□□□ -1.5
SOK2YMR016C DBP1P24784 617 aaKnown RBP5.7□□□□□ -1.5
SOK2YMR016C VPS29P38759 282 aa5.7□□□□□ -1.5
SOK2YMR016C SET4P42948 560 aa5.69□□□□□ -1.5
SOK2YMR016C CST9Q06032 482 aa5.69□□□□□ -1.5
SOK2YMR016C RTG1P32607 177 aa5.67□□□□□ -1.5
SOK2YMR016C TRP5P00931 707 aaKnown RBP5.67□□□□□ -1.5
SOK2YMR016C VMA1P17255 1071 aaKnown RBP5.66□□□□□ -1.5
SOK2YMR016C SAM3Q08986 587 aa5.66□□□□□ -1.5
SOK2YMR016C YNL035CP53962 389 aaKnown RBP5.66□□□□□ -1.5
SOK2YMR016C SEC61P32915 480 aa5.65□□□□□ -1.5
SOK2YMR016C NCR1Q12200 1170 aa5.65□□□□□ -1.5
SOK2YMR016C YFR006WP43590 535 aa5.65□□□□□ -1.51
SOK2YMR016C STS1P38637 319 aa5.64□□□□□ -1.51
SOK2YMR016C ABP1P15891 592 aaKnown RBP5.63□□□□□ -1.51
SOK2YMR016C TFG1P41895 735 aaPredicted RBP5.62□□□□□ -1.51
SOK2YMR016C JIP4Q03361 876 aa5.59□□□□□ -1.51
SOK2YMR016C GYP5Q12344 894 aa5.57□□□□□ -1.52
SOK2YMR016C RCR1P38212 213 aa5.56□□□□□ -1.52
SOK2YMR016C HTA1P04911 132 aaKnown RBP5.55□□□□□ -1.52
SOK2YMR016C HTA2P04912 132 aa5.55□□□□□ -1.52
SOK2YMR016C DAN4P47179 1161 aa5.53□□□□□ -1.52
SOK2YMR016C YDL129WQ07555 291 aa5.52□□□□□ -1.53
SOK2YMR016C PTC4P38089 393 aa5.51□□□□□ -1.53
SOK2YMR016C SAP30P38429 201 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms