RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeastyeast

Gene MSS18, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS18YPR134W MTC1P47018 478 aaKnown RBP12.56□□□□□ -0.4
MSS18YPR134W DRS1P32892 752 aaKnown RBP11.71□□□□□ -0.53
MSS18YPR134W FAP1P53971 965 aa11.52□□□□□ -0.57
MSS18YPR134W PRY3P47033 881 aa10.82□□□□□ -0.68
MSS18YPR134W PRI1P10363 409 aa10.64□□□□□ -0.71
MSS18YPR134W AAD16Q02895 342 aa10.61□□□□□ -0.71
MSS18YPR134W ISW2Q08773 1120 aa10.45□□□□□ -0.74
MSS18YPR134W RPG1P38249 964 aaKnown RBP10.38□□□□□ -0.75
MSS18YPR134W DIP2Q12220 943 aaPredicted RBP10.28□□□□□ -0.76
MSS18YPR134W YCK3P39962 524 aa10.14□□□□□ -0.79
MSS18YPR134W TSR3Q12094 313 aaKnown RBP10.13□□□□□ -0.79
MSS18YPR134W HAA1Q12753 694 aaKnown RBP10.06□□□□□ -0.8
MSS18YPR134W RSE1Q04693 1361 aaKnown RBP9.95□□□□□ -0.82
MSS18YPR134W AVT3P36062 692 aa9.83□□□□□ -0.84
MSS18YPR134W MRPL32P25348 183 aa9.7□□□□□ -0.86
MSS18YPR134W BFR2Q06631 534 aaKnown RBP9.69□□□□□ -0.86
MSS18YPR134W RPL17AP05740 184 aaKnown RBP9.68□□□□□ -0.86
MSS18YPR134W RPL17BP46990 184 aaKnown RBP9.68□□□□□ -0.86
MSS18YPR134W REB1P21538 810 aa9.65□□□□□ -0.86
MSS18YPR134W YGL015CP33199 130 aa9.29□□□□□ -0.92
MSS18YPR134W CDC27P38042 758 aa9.2□□□□□ -0.94
MSS18YPR134W SPT21P35209 758 aa9.17□□□□□ -0.94
MSS18YPR134W YKR023WP36119 530 aaKnown RBP9.13□□□□□ -0.95
MSS18YPR134W HOP09932 586 aa9.01□□□□□ -0.97
MSS18YPR134W DCD1P06773 312 aa8.99□□□□□ -0.97
MSS18YPR134W TFC8Q12308 588 aa8.93□□□□□ -0.98
MSS18YPR134W MAP2P38174 421 aaKnown RBP8.92□□□□□ -0.98
MSS18YPR134W UBP10P53874 792 aaPredicted RBP8.87□□□□□ -0.99
MSS18YPR134W RIM101P33400 625 aa8.83□□□□□ -1
MSS18YPR134W SCY1P53009 804 aa8.75□□□□□ -1.01
MSS18YPR134W BCH2P36122 765 aa8.66□□□□□ -1.02
MSS18YPR134W SLX5P32828 619 aaKnown RBP8.6□□□□□ -1.03
MSS18YPR134W OXP1P28273 1286 aa8.58□□□□□ -1.04
MSS18YPR134W TIF4632P39936 914 aaKnown RBP8.55□□□□□ -1.04
MSS18YPR134W BUD31P25337 157 aaPredicted RBP8.52□□□□□ -1.05
MSS18YPR134W PTP3P40048 928 aa8.49□□□□□ -1.05
MSS18YPR134W TGL3P40308 642 aa8.48□□□□□ -1.05
MSS18YPR134W YIL055CP40523 627 aaKnown RBP8.48□□□□□ -1.05
MSS18YPR134W TFA1P36100 482 aa8.44□□□□□ -1.06
MSS18YPR134W EPS1P40557 701 aa8.44□□□□□ -1.06
MSS18YPR134W BDF1P35817 686 aa8.4□□□□□ -1.06
MSS18YPR134W YAH1Q12184 172 aaKnown RBP8.4□□□□□ -1.06
MSS18YPR134W RSM7P47150 247 aa8.33□□□□□ -1.08
MSS18YPR134W UBP9P39967 754 aa8.27□□□□□ -1.09
MSS18YPR134W BBC1P47068 1157 aa8.27□□□□□ -1.09
MSS18YPR134W AI2P03876 854 aa8.26□□□□□ -1.09
MSS18YPR134W SIS1P25294 352 aaKnown RBP8.18□□□□□ -1.1
MSS18YPR134W YLR271WQ06152 274 aa8.17□□□□□ -1.1
MSS18YPR134W YOR238WQ08634 303 aa8.12□□□□□ -1.11
MSS18YPR134W MST1P07236 462 aa8.07□□□□□ -1.12
MSS18YPR134W YBL029C-AQ3E756 94 aa8.07□□□□□ -1.12
MSS18YPR134W YAP5P40574 245 aa8.04□□□□□ -1.12
MSS18YPR134W SSP1P38871 571 aa8.03□□□□□ -1.12
MSS18YPR134W PSD2P53037 1138 aaKnown RBP8.02□□□□□ -1.13
MSS18YPR134W NSR1P27476 414 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
MSS18YPR134W MRM1P25270 412 aa7.99□□□□□ -1.13
MSS18YPR134W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13 RIP-Chip
MSS18YPR134W WSC3Q12215 556 aa7.98□□□□□ -1.13
MSS18YPR134W PIB1Q06651 286 aa7.96□□□□□ -1.14
MSS18YPR134W VNX1P42839 908 aa7.94□□□□□ -1.14
MSS18YPR134W GTT3P39996 337 aa7.91□□□□□ -1.14
MSS18YPR134W SPP1Q03012 353 aa7.9□□□□□ -1.14
MSS18YPR134W CST9Q06032 482 aa7.9□□□□□ -1.14
MSS18YPR134W MGA2P40578 1113 aa7.84□□□□□ -1.15
MSS18YPR134W TIF11P38912 153 aaKnown RBP7.79□□□□□ -1.16
MSS18YPR134W YFR006WP43590 535 aa7.78□□□□□ -1.16
MSS18YPR134W RTG3P38165 486 aa7.77□□□□□ -1.17
MSS18YPR134W DBP1P24784 617 aaKnown RBP7.76□□□□□ -1.17
MSS18YPR134W VPS29P38759 282 aa7.76□□□□□ -1.17
MSS18YPR134W YMR1P47147 688 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
MSS18YPR134W RCR1P38212 213 aa7.73□□□□□ -1.17
MSS18YPR134W ULI1P43604 169 aa7.73□□□□□ -1.17
MSS18YPR134W STS1P38637 319 aa7.69□□□□□ -1.18
MSS18YPR134W SET4P42948 560 aa7.69□□□□□ -1.18
MSS18YPR134W LDB19Q12502 818 aa7.69□□□□□ -1.18
MSS18YPR134W AIR2Q12476 344 aaKnown RBP7.67□□□□□ -1.18
MSS18YPR134W YOL036WQ08206 761 aa7.66□□□□□ -1.18
MSS18YPR134W FKH1P40466 484 aa7.65□□□□□ -1.18
MSS18YPR134W YJL171CP46992 396 aa7.65□□□□□ -1.18
MSS18YPR134W IOC2Q12072 812 aa7.65□□□□□ -1.18
MSS18YPR134W VMA1P17255 1071 aaKnown RBP7.64□□□□□ -1.19
MSS18YPR134W MSB4Q12317 492 aa7.63□□□□□ -1.19
MSS18YPR134W EAP1P36041 632 aaKnown RBP7.6□□□□□ -1.19
MSS18YPR134W TRP5P00931 707 aaKnown RBP7.59□□□□□ -1.19
MSS18YPR134W RTG1P32607 177 aa7.56□□□□□ -1.2
MSS18YPR134W SAM3Q08986 587 aa7.54□□□□□ -1.2
MSS18YPR134W BMT6Q12291 365 aa7.53□□□□□ -1.2
MSS18YPR134W NCR1Q12200 1170 aa7.5□□□□□ -1.21
MSS18YPR134W GYP5Q12344 894 aa7.5□□□□□ -1.21
MSS18YPR134W YNL035CP53962 389 aaKnown RBP7.49□□□□□ -1.21
MSS18YPR134W DCW1P36091 449 aa7.48□□□□□ -1.21
MSS18YPR134W RAM2P29703 316 aa7.44□□□□□ -1.22
MSS18YPR134W MIF2P35201 549 aa7.44□□□□□ -1.22
MSS18YPR134W SEC61P32915 480 aa7.43□□□□□ -1.22
MSS18YPR134W HTA1P04911 132 aaKnown RBP7.42□□□□□ -1.22
MSS18YPR134W HTA2P04912 132 aa7.42□□□□□ -1.22
MSS18YPR134W TFG1P41895 735 aaPredicted RBP7.42□□□□□ -1.22
MSS18YPR134W ABP1P15891 592 aaKnown RBP7.39□□□□□ -1.23
MSS18YPR134W MAK11P20484 414 aaKnown RBP7.39□□□□□ -1.23
MSS18YPR134W YEL023CP39992 682 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms