RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W FAP1P53971 965 aa11.39□□□□□ -0.59
PKR1YMR123W MTC1P47018 478 aaKnown RBP11.13□□□□□ -0.63
PKR1YMR123W PRY3P47033 881 aa10.77□□□□□ -0.69
PKR1YMR123W YCK3P39962 524 aa10.18□□□□□ -0.78
PKR1YMR123W DRS1P32892 752 aaKnown RBP10.16□□□□□ -0.78
PKR1YMR123W AAD16Q02895 342 aa10.12□□□□□ -0.79
PKR1YMR123W PRI1P10363 409 aa10.04□□□□□ -0.8
PKR1YMR123W HAA1Q12753 694 aaKnown RBP9.92□□□□□ -0.82
PKR1YMR123W TSR3Q12094 313 aaKnown RBP9.5□□□□□ -0.89
PKR1YMR123W RPG1P38249 964 aaKnown RBP9.46□□□□□ -0.9
PKR1YMR123W ISW2Q08773 1120 aa9.44□□□□□ -0.9
PKR1YMR123W MRPL32P25348 183 aa9.04□□□□□ -0.96
PKR1YMR123W YGL015CP33199 130 aa8.95□□□□□ -0.98
PKR1YMR123W DIP2Q12220 943 aaPredicted RBP8.79□□□□□ -1
PKR1YMR123W BUD31P25337 157 aaPredicted RBP8.75□□□□□ -1.01
PKR1YMR123W BFR2Q06631 534 aaKnown RBP8.61□□□□□ -1.03
PKR1YMR123W AVT3P36062 692 aa8.59□□□□□ -1.03
PKR1YMR123W RSE1Q04693 1361 aaKnown RBP8.55□□□□□ -1.04
PKR1YMR123W CDC27P38042 758 aa8.47□□□□□ -1.05
PKR1YMR123W REB1P21538 810 aa8.44□□□□□ -1.06
PKR1YMR123W RPL17AP05740 184 aaKnown RBP8.41□□□□□ -1.06
PKR1YMR123W RPL17BP46990 184 aaKnown RBP8.41□□□□□ -1.06
PKR1YMR123W MAP2P38174 421 aaKnown RBP8.33□□□□□ -1.08
PKR1YMR123W UBP10P53874 792 aaPredicted RBP8.24□□□□□ -1.09
PKR1YMR123W SIS1P25294 352 aaKnown RBP8.23□□□□□ -1.09
PKR1YMR123W YKR023WP36119 530 aaKnown RBP8.14□□□□□ -1.11
PKR1YMR123W DCD1P06773 312 aa8.07□□□□□ -1.12
PKR1YMR123W HOP09932 586 aa8.02□□□□□ -1.13
PKR1YMR123W UBP9P39967 754 aa7.98□□□□□ -1.13
PKR1YMR123W SCY1P53009 804 aa7.95□□□□□ -1.14
PKR1YMR123W TFC8Q12308 588 aa7.95□□□□□ -1.14
PKR1YMR123W SPT21P35209 758 aa7.94□□□□□ -1.14
PKR1YMR123W TIF4632P39936 914 aaKnown RBP7.91□□□□□ -1.14
PKR1YMR123W TGL3P40308 642 aa7.89□□□□□ -1.15
PKR1YMR123W TFA1P36100 482 aa7.88□□□□□ -1.15
PKR1YMR123W SLX5P32828 619 aaKnown RBP7.85□□□□□ -1.15
PKR1YMR123W BCH2P36122 765 aa7.66□□□□□ -1.18
PKR1YMR123W RIM101P33400 625 aa7.62□□□□□ -1.19
PKR1YMR123W YBL029C-AQ3E756 94 aa7.6□□□□□ -1.19
PKR1YMR123W MST1P07236 462 aa7.42□□□□□ -1.22
PKR1YMR123W VNX1P42839 908 aa7.41□□□□□ -1.22
PKR1YMR123W BDF1P35817 686 aa7.38□□□□□ -1.23
PKR1YMR123W EPS1P40557 701 aa7.38□□□□□ -1.23
PKR1YMR123W YOR238WQ08634 303 aa7.36□□□□□ -1.23
PKR1YMR123W OXP1P28273 1286 aa7.35□□□□□ -1.23
PKR1YMR123W SPP1Q03012 353 aa7.34□□□□□ -1.23
PKR1YMR123W WSC3Q12215 556 aa7.32□□□□□ -1.24
PKR1YMR123W AIR2Q12476 344 aaKnown RBP7.32□□□□□ -1.24
PKR1YMR123W YJL171CP46992 396 aa7.26□□□□□ -1.25
PKR1YMR123W FKH1P40466 484 aa7.24□□□□□ -1.25
PKR1YMR123W YIL055CP40523 627 aaKnown RBP7.23□□□□□ -1.25
PKR1YMR123W PTP3P40048 928 aa7.21□□□□□ -1.26
PKR1YMR123W TIF11P38912 153 aaKnown RBP7.16□□□□□ -1.26
PKR1YMR123W NSR1P27476 414 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26 RIP-Chip
PKR1YMR123W YAP5P40574 245 aa7.15□□□□□ -1.26
PKR1YMR123W RSM7P47150 247 aa7.15□□□□□ -1.26
PKR1YMR123W YAH1Q12184 172 aaKnown RBP7.15□□□□□ -1.26
PKR1YMR123W LDB19Q12502 818 aa7.1□□□□□ -1.27
PKR1YMR123W SSP1P38871 571 aa7.09□□□□□ -1.27
PKR1YMR123W YLR271WQ06152 274 aa7.08□□□□□ -1.28
PKR1YMR123W BMT6Q12291 365 aa7.07□□□□□ -1.28
PKR1YMR123W AI2P03876 854 aa7.05□□□□□ -1.28
PKR1YMR123W GTT3P39996 337 aa7.05□□□□□ -1.28
PKR1YMR123W ULI1P43604 169 aa7.03□□□□□ -1.28
PKR1YMR123W BBC1P47068 1157 aa7.03□□□□□ -1.28
PKR1YMR123W IOC2Q12072 812 aa7.02□□□□□ -1.29
PKR1YMR123W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
PKR1YMR123W PIB1Q06651 286 aa6.98□□□□□ -1.29
PKR1YMR123W PSD2P53037 1138 aaKnown RBP6.96□□□□□ -1.3
PKR1YMR123W MGA2P40578 1113 aa6.9□□□□□ -1.3
PKR1YMR123W RTG1P32607 177 aa6.85□□□□□ -1.31
PKR1YMR123W CST9Q06032 482 aa6.84□□□□□ -1.31
PKR1YMR123W MRM1P25270 412 aa6.8□□□□□ -1.32
PKR1YMR123W NCR1Q12200 1170 aa6.8□□□□□ -1.32
PKR1YMR123W TRP5P00931 707 aaKnown RBP6.79□□□□□ -1.32
PKR1YMR123W SET4P42948 560 aa6.79□□□□□ -1.32
PKR1YMR123W MSB4Q12317 492 aa6.76□□□□□ -1.33
PKR1YMR123W EAP1P36041 632 aaKnown RBP6.75□□□□□ -1.33
PKR1YMR123W YOL036WQ08206 761 aa6.75□□□□□ -1.33
PKR1YMR123W RTG3P38165 486 aa6.7□□□□□ -1.34
PKR1YMR123W YNL035CP53962 389 aaKnown RBP6.7□□□□□ -1.34
PKR1YMR123W BCK2P33306 851 aa6.69□□□□□ -1.34
PKR1YMR123W SEC61P32915 480 aa6.68□□□□□ -1.34
PKR1YMR123W SAP30P38429 201 aa6.66□□□□□ -1.34
PKR1YMR123W VPS29P38759 282 aa6.66□□□□□ -1.34
PKR1YMR123W YMR1P47147 688 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
PKR1YMR123W RCR1P38212 213 aa6.63□□□□□ -1.35
PKR1YMR123W YFR006WP43590 535 aa6.6□□□□□ -1.35
PKR1YMR123W TFG1P41895 735 aaPredicted RBP6.59□□□□□ -1.35
PKR1YMR123W DBP1P24784 617 aaKnown RBP6.58□□□□□ -1.36
PKR1YMR123W STS1P38637 319 aa6.57□□□□□ -1.36
PKR1YMR123W CHL1P22516 861 aaPredicted RBP6.56□□□□□ -1.36
PKR1YMR123W RAM2P29703 316 aa6.56□□□□□ -1.36
PKR1YMR123W VMA1P17255 1071 aaKnown RBP6.55□□□□□ -1.36
PKR1YMR123W DAN4P47179 1161 aa6.55□□□□□ -1.36
PKR1YMR123W PRE3P38624 215 aa6.53□□□□□ -1.36
PKR1YMR123W RGA2Q06407 1009 aa6.53□□□□□ -1.36
PKR1YMR123W YDL129WQ07555 291 aa6.52□□□□□ -1.37
PKR1YMR123W MAK11P20484 414 aaKnown RBP6.51□□□□□ -1.37
PKR1YMR123W SAM3Q08986 587 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms