RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W MTC1P47018 478 aaKnown RBP8.49□□□□□ -1.05
BRP1YGL007W FAP1P53971 965 aa8.42□□□□□ -1.06
BRP1YGL007W PRY3P47033 881 aa7.93□□□□□ -1.14
BRP1YGL007W AAD16Q02895 342 aa7.58□□□□□ -1.2
BRP1YGL007W PRI1P10363 409 aa7.53□□□□□ -1.2
BRP1YGL007W YCK3P39962 524 aa7.42□□□□□ -1.22
BRP1YGL007W HAA1Q12753 694 aaKnown RBP7.39□□□□□ -1.23
BRP1YGL007W DRS1P32892 752 aaKnown RBP7.28□□□□□ -1.24
BRP1YGL007W ISW2Q08773 1120 aa7.2□□□□□ -1.26
BRP1YGL007W RPG1P38249 964 aaKnown RBP7.14□□□□□ -1.27
BRP1YGL007W TSR3Q12094 313 aaKnown RBP7.09□□□□□ -1.27
BRP1YGL007W MRPL32P25348 183 aa6.83□□□□□ -1.32
BRP1YGL007W YGL015CP33199 130 aa6.73□□□□□ -1.33
BRP1YGL007W DIP2Q12220 943 aaPredicted RBP6.63□□□□□ -1.35
BRP1YGL007W RSE1Q04693 1361 aaKnown RBP6.59□□□□□ -1.35
BRP1YGL007W REB1P21538 810 aa6.47□□□□□ -1.37
BRP1YGL007W BUD31P25337 157 aaPredicted RBP6.44□□□□□ -1.38
BRP1YGL007W RPL17AP05740 184 aaKnown RBP6.42□□□□□ -1.38
BRP1YGL007W RPL17BP46990 184 aaKnown RBP6.42□□□□□ -1.38
BRP1YGL007W CDC27P38042 758 aa6.34□□□□□ -1.39
BRP1YGL007W UBP10P53874 792 aaPredicted RBP6.25□□□□□ -1.41
BRP1YGL007W MAP2P38174 421 aaKnown RBP6.23□□□□□ -1.41
BRP1YGL007W AVT3P36062 692 aa6.18□□□□□ -1.42
BRP1YGL007W YKR023WP36119 530 aaKnown RBP6.16□□□□□ -1.42
BRP1YGL007W SIS1P25294 352 aaKnown RBP6.09□□□□□ -1.43
BRP1YGL007W SPT21P35209 758 aa6.07□□□□□ -1.44
BRP1YGL007W DCD1P06773 312 aa6.05□□□□□ -1.44
BRP1YGL007W HOP09932 586 aa6.05□□□□□ -1.44
BRP1YGL007W TFC8Q12308 588 aa6.04□□□□□ -1.44
BRP1YGL007W UBP9P39967 754 aa6.03□□□□□ -1.44
BRP1YGL007W TIF4632P39936 914 aaKnown RBP6.02□□□□□ -1.45
BRP1YGL007W TGL3P40308 642 aa6□□□□□ -1.45
BRP1YGL007W SCY1P53009 804 aa5.99□□□□□ -1.45
BRP1YGL007W SLX5P32828 619 aaKnown RBP5.96□□□□□ -1.46
BRP1YGL007W BCH2P36122 765 aa5.83□□□□□ -1.48
BRP1YGL007W BFR2Q06631 534 aaKnown RBP5.74□□□□□ -1.49
BRP1YGL007W RIM101P33400 625 aa5.73□□□□□ -1.49
BRP1YGL007W YBL029C-AQ3E756 94 aa5.68□□□□□ -1.5
BRP1YGL007W MST1P07236 462 aa5.65□□□□□ -1.5
BRP1YGL007W BDF1P35817 686 aa5.63□□□□□ -1.51
BRP1YGL007W EPS1P40557 701 aa5.63□□□□□ -1.51
BRP1YGL007W YOR238WQ08634 303 aa5.62□□□□□ -1.51
BRP1YGL007W VNX1P42839 908 aa5.59□□□□□ -1.51
BRP1YGL007W SPP1Q03012 353 aa5.55□□□□□ -1.52
BRP1YGL007W NSR1P27476 414 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
BRP1YGL007W OXP1P28273 1286 aa5.51□□□□□ -1.53
BRP1YGL007W YJL171CP46992 396 aa5.5□□□□□ -1.53
BRP1YGL007W WSC3Q12215 556 aa5.5□□□□□ -1.53
BRP1YGL007W YAP5P40574 245 aa5.49□□□□□ -1.53
BRP1YGL007W PTP3P40048 928 aa5.48□□□□□ -1.53
BRP1YGL007W AIR2Q12476 344 aaKnown RBP5.48□□□□□ -1.53
BRP1YGL007W YIL055CP40523 627 aaKnown RBP5.47□□□□□ -1.53
BRP1YGL007W TIF11P38912 153 aaKnown RBP5.44□□□□□ -1.54
BRP1YGL007W FKH1P40466 484 aa5.44□□□□□ -1.54
BRP1YGL007W BBC1P47068 1157 aa5.43□□□□□ -1.54
BRP1YGL007W GTT3P39996 337 aa5.4□□□□□ -1.54
BRP1YGL007W AI2P03876 854 aa5.37□□□□□ -1.55
BRP1YGL007W RSM7P47150 247 aa5.37□□□□□ -1.55
BRP1YGL007W BMT6Q12291 365 aa5.36□□□□□ -1.55
BRP1YGL007W LDB19Q12502 818 aa5.36□□□□□ -1.55
BRP1YGL007W ULI1P43604 169 aa5.34□□□□□ -1.55
BRP1YGL007W IOC2Q12072 812 aa5.32□□□□□ -1.56
BRP1YGL007W YAH1Q12184 172 aaKnown RBP5.28□□□□□ -1.56
BRP1YGL007W PIB1Q06651 286 aa5.27□□□□□ -1.57
BRP1YGL007W EAP1P36041 632 aaKnown RBP5.22□□□□□ -1.57
BRP1YGL007W MSB4Q12317 492 aa5.22□□□□□ -1.57
BRP1YGL007W RTG1P32607 177 aa5.21□□□□□ -1.58
BRP1YGL007W NCR1Q12200 1170 aa5.2□□□□□ -1.58
BRP1YGL007W TRP5P00931 707 aaKnown RBP5.17□□□□□ -1.58
BRP1YGL007W SET4P42948 560 aa5.17□□□□□ -1.58
BRP1YGL007W YOL036WQ08206 761 aa5.16□□□□□ -1.58
BRP1YGL007W YLR271WQ06152 274 aa5.15□□□□□ -1.59
BRP1YGL007W MRM1P25270 412 aa5.14□□□□□ -1.59
BRP1YGL007W SEC61P32915 480 aa5.14□□□□□ -1.59
BRP1YGL007W PSD2P53037 1138 aaKnown RBP5.14□□□□□ -1.59
BRP1YGL007W YNL035CP53962 389 aaKnown RBP5.14□□□□□ -1.59
BRP1YGL007W TFG1P41895 735 aaPredicted RBP5.1□□□□□ -1.59
BRP1YGL007W BCK2P33306 851 aa5.08□□□□□ -1.6
BRP1YGL007W DBP1P24784 617 aaKnown RBP5.07□□□□□ -1.6
BRP1YGL007W YMR1P47147 688 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
BRP1YGL007W SAP30P38429 201 aa5.06□□□□□ -1.6
BRP1YGL007W VMA1P17255 1071 aaKnown RBP5.05□□□□□ -1.6
BRP1YGL007W YFR006WP43590 535 aa5.04□□□□□ -1.6
BRP1YGL007W CHL1P22516 861 aaPredicted RBP5.03□□□□□ -1.6
BRP1YGL007W VPS29P38759 282 aa5.03□□□□□ -1.6
BRP1YGL007W SAM3Q08986 587 aa5.03□□□□□ -1.6
BRP1YGL007W DAN4P47179 1161 aa5.02□□□□□ -1.61
BRP1YGL007W JIP4Q03361 876 aa5.01□□□□□ -1.61
BRP1YGL007W RTG3P38165 486 aa5□□□□□ -1.61
BRP1YGL007W STS1P38637 319 aa5□□□□□ -1.61
BRP1YGL007W YDL129WQ07555 291 aa5□□□□□ -1.61
BRP1YGL007W PRE3P38624 215 aa4.99□□□□□ -1.61
BRP1YGL007W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
BRP1YGL007W ABP1P15891 592 aaKnown RBP4.96□□□□□ -1.62
BRP1YGL007W GYP5Q12344 894 aa4.95□□□□□ -1.62
BRP1YGL007W PTC4P38089 393 aa4.94□□□□□ -1.62
BRP1YGL007W CST9Q06032 482 aa4.94□□□□□ -1.62
BRP1YGL007W HTA1P04911 132 aaKnown RBP4.93□□□□□ -1.62
BRP1YGL007W HTA2P04912 132 aa4.93□□□□□ -1.62
BRP1YGL007W DCW1P36091 449 aa4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms