RNA–Protein interactions for RNA: YIR002C

MPH1, Transcript of 3'-5' DNA helicase involved in error-free bypass of DNA lesions, yeast

Gene MPH1, Length 2,982 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MPH1	YIR002C	DRS1	P32892	752 aa	Known RBP	6.82	□□□□□ -1.32
MPH1	YIR002C	MTC1	P47018	478 aa	Known RBP	6.6	□□□□□ -1.35
MPH1	YIR002C	BFR2	Q06631	534 aa	Known RBP	5.98	□□□□□ -1.45
MPH1	YIR002C	FAP1	P53971	965 aa		5.82	□□□□□ -1.48
MPH1	YIR002C	DIP2	Q12220	943 aa	Predicted RBP	5.75	□□□□□ -1.49
MPH1	YIR002C	TFA1	P36100	482 aa		5.7	□□□□□ -1.5
MPH1	YIR002C	AVT3	P36062	692 aa		5.67	□□□□□ -1.5
MPH1	YIR002C	RSE1	Q04693	1361 aa	Known RBP	5.39	□□□□□ -1.55
MPH1	YIR002C	PRY3	P47033	881 aa		5.39	□□□□□ -1.55
MPH1	YIR002C	ISW2	Q08773	1120 aa		5.38	□□□□□ -1.55
MPH1	YIR002C	MON2	P48563	1636 aa	Predicted RBP	5.3	□□□□□ -1.56
MPH1	YIR002C	RPG1	P38249	964 aa	Known RBP	5.28	□□□□□ -1.56
MPH1	YIR002C	MIF2	P35201	549 aa		5.23	□□□□□ -1.57
MPH1	YIR002C	PRI1	P10363	409 aa		5.2	□□□□□ -1.58
MPH1	YIR002C	RPL17A	P05740	184 aa	Known RBP	5.17	□□□□□ -1.58
MPH1	YIR002C	RPL17B	P46990	184 aa	Known RBP	5.17	□□□□□ -1.58
MPH1	YIR002C	REB1	P21538	810 aa		5.13	□□□□□ -1.59
MPH1	YIR002C	RQC2	Q12532	1038 aa	Known RBP	5.12	□□□□□ -1.59
MPH1	YIR002C	AAD16	Q02895	342 aa		5.11	□□□□□ -1.59
MPH1	YIR002C	INO80	P53115	1489 aa		5.02	□□□□□ -1.61
MPH1	YIR002C	SPA2	P23201	1466 aa	Known RBP	5.01	□□□□□ -1.61
MPH1	YIR002C	TSR3	Q12094	313 aa	Known RBP	4.96	□□□□□ -1.61
MPH1	YIR002C	HAA1	Q12753	694 aa	Known RBP	4.96	□□□□□ -1.62
MPH1	YIR002C	SPT21	P35209	758 aa		4.93	□□□□□ -1.62
MPH1	YIR002C	RIM101	P33400	625 aa		4.92	□□□□□ -1.62
MPH1	YIR002C	PTP3	P40048	928 aa		4.9	□□□□□ -1.63
MPH1	YIR002C	MRPL32	P25348	183 aa		4.81	□□□□□ -1.64
MPH1	YIR002C	SSP1	P38871	571 aa		4.8	□□□□□ -1.64
MPH1	YIR002C	YIL055C	P40523	627 aa	Known RBP	4.79	□□□□□ -1.64
MPH1	YIR002C	DNA2	P38859	1522 aa		4.79	□□□□□ -1.64
MPH1	YIR002C	DMA1	P38823	416 aa		4.77	□□□□□ -1.65
MPH1	YIR002C	YAH1	Q12184	172 aa	Known RBP	4.77	□□□□□ -1.65
MPH1	YIR002C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
MPH1	YIR002C	OXP1	P28273	1286 aa		4.76	□□□□□ -1.65
MPH1	YIR002C	KOG1	P38873	1557 aa		4.76	□□□□□ -1.65
MPH1	YIR002C	YFR006W	P43590	535 aa		4.75	□□□□□ -1.65
MPH1	YIR002C	YKR023W	P36119	530 aa	Known RBP	4.74	□□□□□ -1.65
MPH1	YIR002C	HO	P09932	586 aa		4.68	□□□□□ -1.66
MPH1	YIR002C	YLR271W	Q06152	274 aa		4.67	□□□□□ -1.66
MPH1	YIR002C	TFC8	Q12308	588 aa		4.67	□□□□□ -1.66
MPH1	YIR002C	RSM7	P47150	247 aa		4.66	□□□□□ -1.66
MPH1	YIR002C	DCD1	P06773	312 aa		4.63	□□□□□ -1.67
MPH1	YIR002C	MGA2	P40578	1113 aa		4.63	□□□□□ -1.67
MPH1	YIR002C	CDC27	P38042	758 aa		4.61	□□□□□ -1.67
MPH1	YIR002C	BBC1	P47068	1157 aa		4.57	□□□□□ -1.68
MPH1	YIR002C	AI2	P03876	854 aa		4.57	□□□□□ -1.68
MPH1	YIR002C	YCK3	P39962	524 aa		4.55	□□□□□ -1.68
MPH1	YIR002C	BCH2	P36122	765 aa		4.54	□□□□□ -1.68
MPH1	YIR002C	CST9	Q06032	482 aa		4.53	□□□□□ -1.68
MPH1	YIR002C	PSD2	P53037	1138 aa	Known RBP	4.53	□□□□□ -1.68
MPH1	YIR002C	YGL015C	P33199	130 aa		4.49	□□□□□ -1.69
MPH1	YIR002C	EPS1	P40557	701 aa		4.48	□□□□□ -1.69
MPH1	YIR002C	SCY1	P53009	804 aa		4.46	□□□□□ -1.7
MPH1	YIR002C	BDF1	P35817	686 aa		4.44	□□□□□ -1.7
MPH1	YIR002C	MRM1	P25270	412 aa		4.44	□□□□□ -1.7
MPH1	YIR002C	SWR1	Q05471	1514 aa		4.44	□□□□□ -1.7
MPH1	YIR002C	UBP10	P53874	792 aa	Predicted RBP	4.43	□□□□□ -1.7
MPH1	YIR002C	SAS10	Q12136	610 aa	Predicted RBP	4.43	□□□□□ -1.7
MPH1	YIR002C	LEO1	P38439	464 aa		4.42	□□□□□ -1.7
MPH1	YIR002C	MAP2	P38174	421 aa	Known RBP	4.41	□□□□□ -1.7
MPH1	YIR002C	RTG3	P38165	486 aa		4.4	□□□□□ -1.7
MPH1	YIR002C	RAM2	P29703	316 aa		4.39	□□□□□ -1.71
MPH1	YIR002C	SLX5	P32828	619 aa	Known RBP	4.38	□□□□□ -1.71
MPH1	YIR002C	SET1	P38827	1080 aa	Known RBP	4.37	□□□□□ -1.71
MPH1	YIR002C	LEU3	P08638	886 aa		4.37	□□□□□ -1.71
MPH1	YIR002C	RCR1	P38212	213 aa		4.35	□□□□□ -1.71
MPH1	YIR002C	TAF7	Q05021	590 aa		4.35	□□□□□ -1.71
MPH1	YIR002C	IFH1	P39520	1085 aa		4.35	□□□□□ -1.71
MPH1	YIR002C	MAK11	P20484	414 aa	Known RBP	4.34	□□□□□ -1.72
MPH1	YIR002C	CKB1	P43639	278 aa		4.32	□□□□□ -1.72
MPH1	YIR002C	SPB4	P25808	606 aa	Predicted RBP	4.32	□□□□□ -1.72
MPH1	YIR002C	VPS70	P47161	811 aa		4.32	□□□□□ -1.72
MPH1	YIR002C	TIF4632	P39936	914 aa	Known RBP	4.3	□□□□□ -1.72
MPH1	YIR002C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
MPH1	YIR002C	VPS29	P38759	282 aa		4.29	□□□□□ -1.72
MPH1	YIR002C	YPR148C	Q06523	435 aa		4.29	□□□□□ -1.72
MPH1	YIR002C	COQ8	P27697	501 aa		4.27	□□□□□ -1.73
MPH1	YIR002C	RPN1	P38764	993 aa	Known RBP	4.27	□□□□□ -1.73
MPH1	YIR002C	DBP1	P24784	617 aa	Known RBP	4.25	□□□□□ -1.73
MPH1	YIR002C	NOP53	Q12080	455 aa	Known RBP	4.25	□□□□□ -1.73
MPH1	YIR002C	YOR238W	Q08634	303 aa		4.25	□□□□□ -1.73
MPH1	YIR002C	SIS1	P25294	352 aa	Known RBP	4.24	□□□□□ -1.73
MPH1	YIR002C	STS1	P38637	319 aa		4.23	□□□□□ -1.73
MPH1	YIR002C	TGL3	P40308	642 aa		4.23	□□□□□ -1.73
MPH1	YIR002C	YAP5	P40574	245 aa		4.22	□□□□□ -1.73
MPH1	YIR002C	PBS2	P08018	668 aa		4.22	□□□□□ -1.73
MPH1	YIR002C	DNF1	P32660	1571 aa		4.2	□□□□□ -1.74
MPH1	YIR002C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
MPH1	YIR002C	DSF2	P38213	736 aa		4.19	□□□□□ -1.74
MPH1	YIR002C	EDS1	P38073	919 aa		4.19	□□□□□ -1.74
MPH1	YIR002C	REF2	P42073	533 aa	Predicted RBP	4.19	□□□□□ -1.74
MPH1	YIR002C	PIB1	Q06651	286 aa		4.19	□□□□□ -1.74
MPH1	YIR002C	PTC3	P34221	468 aa	Known RBP	4.18	□□□□□ -1.74
MPH1	YIR002C	UBP9	P39967	754 aa		4.18	□□□□□ -1.74
MPH1	YIR002C	MAM3	Q12296	706 aa		4.17	□□□□□ -1.74
MPH1	YIR002C	IRC20	Q06554	1556 aa		4.15	□□□□□ -1.75
MPH1	YIR002C	VMA1	P17255	1071 aa	Known RBP	4.15	□□□□□ -1.75
MPH1	YIR002C	ATH1	P48016	1211 aa		4.15	□□□□□ -1.75
MPH1	YIR002C	MAK21	Q12176	1025 aa	Known RBP	4.15	□□□□□ -1.75
MPH1	YIR002C	GTT3	P39996	337 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms