Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AL133380.1-201ENST00000506013 324 ntBASIC28.13■■■□□ 2.09
PCDHA13Q9Y5I0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.13■■■□□ 2.09
PCDHA13Q9Y5I0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA13Q9Y5I0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.12■■■□□ 2.09
PCDHA13Q9Y5I0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA13Q9Y5I0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA13Q9Y5I0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA13Q9Y5I0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA13Q9Y5I0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA13Q9Y5I0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHA13Q9Y5I0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.09■■■□□ 2.09
PCDHA13Q9Y5I0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHA13Q9Y5I0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
PCDHA13Q9Y5I0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
PCDHA13Q9Y5I0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.06■■■□□ 2.08
PCDHA13Q9Y5I0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHA13Q9Y5I0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHA13Q9Y5I0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.05■■■□□ 2.08
PCDHA13Q9Y5I0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHA13Q9Y5I0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHA13Q9Y5I0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.04■■■□□ 2.08
PCDHA13Q9Y5I0 DRD5P2-201ENST00000421395 2012 ntBASIC28.04■■■□□ 2.08
PCDHA13Q9Y5I0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHA13Q9Y5I0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHA13Q9Y5I0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHA13Q9Y5I0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHA13Q9Y5I0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA13Q9Y5I0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.99■■■□□ 2.07
PCDHA13Q9Y5I0 AC010864.1-201ENST00000609407 1511 ntBASIC27.99■■■□□ 2.07
PCDHA13Q9Y5I0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA13Q9Y5I0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.98■■■□□ 2.07
PCDHA13Q9Y5I0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
PCDHA13Q9Y5I0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.98■■■□□ 2.07
PCDHA13Q9Y5I0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
PCDHA13Q9Y5I0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHA13Q9Y5I0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
PCDHA13Q9Y5I0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.97■■■□□ 2.07
PCDHA13Q9Y5I0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHA13Q9Y5I0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHA13Q9Y5I0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
PCDHA13Q9Y5I0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.94■■■□□ 2.06
PCDHA13Q9Y5I0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
PCDHA13Q9Y5I0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.93■■■□□ 2.06
PCDHA13Q9Y5I0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHA13Q9Y5I0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHA13Q9Y5I0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.91■■■□□ 2.06
PCDHA13Q9Y5I0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHA13Q9Y5I0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHA13Q9Y5I0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHA13Q9Y5I0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
PCDHA13Q9Y5I0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
PCDHA13Q9Y5I0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
PCDHA13Q9Y5I0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
PCDHA13Q9Y5I0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.88■■■□□ 2.05
PCDHA13Q9Y5I0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.88■■■□□ 2.05
PCDHA13Q9Y5I0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHA13Q9Y5I0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.86■■■□□ 2.05
PCDHA13Q9Y5I0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
PCDHA13Q9Y5I0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.85■■■□□ 2.05
PCDHA13Q9Y5I0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHA13Q9Y5I0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.84■■■□□ 2.05
PCDHA13Q9Y5I0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHA13Q9Y5I0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.84■■■□□ 2.05
PCDHA13Q9Y5I0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
PCDHA13Q9Y5I0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.81■■■□□ 2.04
PCDHA13Q9Y5I0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHA13Q9Y5I0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHA13Q9Y5I0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PCDHA13Q9Y5I0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
PCDHA13Q9Y5I0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDHA13Q9Y5I0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PCDHA13Q9Y5I0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.04
PCDHA13Q9Y5I0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PCDHA13Q9Y5I0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.76■■■□□ 2.03
PCDHA13Q9Y5I0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PCDHA13Q9Y5I0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHA13Q9Y5I0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PCDHA13Q9Y5I0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.75■■■□□ 2.03
PCDHA13Q9Y5I0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.75■■■□□ 2.03
PCDHA13Q9Y5I0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 AL121749.1-202ENST00000609313 2153 ntBASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHA13Q9Y5I0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDHA13Q9Y5I0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
PCDHA13Q9Y5I0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDHA13Q9Y5I0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDHA13Q9Y5I0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
PCDHA13Q9Y5I0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCDHA13Q9Y5I0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCDHA13Q9Y5I0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHA13Q9Y5I0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.7■■■□□ 2.02
PCDHA13Q9Y5I0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.7■■■□□ 2.02
PCDHA13Q9Y5I0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
PCDHA13Q9Y5I0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms