Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
DENND2AQ9ULE3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
DENND2AQ9ULE3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
DENND2AQ9ULE3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
DENND2AQ9ULE3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
DENND2AQ9ULE3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
DENND2AQ9ULE3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
DENND2AQ9ULE3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
DENND2AQ9ULE3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
DENND2AQ9ULE3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
DENND2AQ9ULE3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
DENND2AQ9ULE3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
DENND2AQ9ULE3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
DENND2AQ9ULE3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
DENND2AQ9ULE3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.1■■■□□ 2.73
DENND2AQ9ULE3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
DENND2AQ9ULE3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.09■■■□□ 2.73
DENND2AQ9ULE3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
DENND2AQ9ULE3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
DENND2AQ9ULE3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
DENND2AQ9ULE3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
DENND2AQ9ULE3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
DENND2AQ9ULE3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
DENND2AQ9ULE3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.06■■■□□ 2.72
DENND2AQ9ULE3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
DENND2AQ9ULE3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.04■■■□□ 2.72
DENND2AQ9ULE3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.04■■■□□ 2.72
DENND2AQ9ULE3 HLA-V-202ENST00000446817 847 ntBASIC32.04■■■□□ 2.72
DENND2AQ9ULE3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.04■■■□□ 2.72
DENND2AQ9ULE3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.04■■■□□ 2.72
DENND2AQ9ULE3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
DENND2AQ9ULE3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
DENND2AQ9ULE3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
DENND2AQ9ULE3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.02■■■□□ 2.72
DENND2AQ9ULE3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
DENND2AQ9ULE3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32■■■□□ 2.71
DENND2AQ9ULE3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32■■■□□ 2.71
DENND2AQ9ULE3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
DENND2AQ9ULE3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
DENND2AQ9ULE3 AC010864.1-201ENST00000609407 1511 ntBASIC32■■■□□ 2.71
DENND2AQ9ULE3 LINC01971-201ENST00000617888 1048 ntBASIC31.99■■■□□ 2.71
DENND2AQ9ULE3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
DENND2AQ9ULE3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
DENND2AQ9ULE3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.98■■■□□ 2.71
DENND2AQ9ULE3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
DENND2AQ9ULE3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
DENND2AQ9ULE3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.95■■■□□ 2.71
DENND2AQ9ULE3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.94■■■□□ 2.7
DENND2AQ9ULE3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.94■■■□□ 2.7
DENND2AQ9ULE3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
DENND2AQ9ULE3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
DENND2AQ9ULE3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
DENND2AQ9ULE3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
DENND2AQ9ULE3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.93■■■□□ 2.7
DENND2AQ9ULE3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
DENND2AQ9ULE3 DUX4L11-201ENST00000611504 1267 ntBASIC31.92■■■□□ 2.7
DENND2AQ9ULE3 DUX4L12-201ENST00000614593 1267 ntBASIC31.92■■■□□ 2.7
DENND2AQ9ULE3 DUX4L14-201ENST00000621227 1267 ntBASIC31.92■■■□□ 2.7
DENND2AQ9ULE3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
DENND2AQ9ULE3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
DENND2AQ9ULE3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.89■■■□□ 2.7
DENND2AQ9ULE3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
DENND2AQ9ULE3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
DENND2AQ9ULE3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
DENND2AQ9ULE3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.87■■■□□ 2.69
DENND2AQ9ULE3 MIR3648-2-201ENST00000581792 180 ntBASIC31.86■■■□□ 2.69
DENND2AQ9ULE3 MIR3648-1-201ENST00000615959 180 ntBASIC31.86■■■□□ 2.69
DENND2AQ9ULE3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.86■■■□□ 2.69
DENND2AQ9ULE3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
DENND2AQ9ULE3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
DENND2AQ9ULE3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.84■■■□□ 2.69
DENND2AQ9ULE3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.84■■■□□ 2.69
DENND2AQ9ULE3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.84■■■□□ 2.69
DENND2AQ9ULE3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
DENND2AQ9ULE3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.83■■■□□ 2.69
DENND2AQ9ULE3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.83■■■□□ 2.69
DENND2AQ9ULE3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
DENND2AQ9ULE3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.82■■■□□ 2.68
DENND2AQ9ULE3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.82■■■□□ 2.68
DENND2AQ9ULE3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DENND2AQ9ULE3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.81■■■□□ 2.68
DENND2AQ9ULE3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DENND2AQ9ULE3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.8■■■□□ 2.68
DENND2AQ9ULE3 AC016575.1-201ENST00000607026 382 ntBASIC31.8■■■□□ 2.68
DENND2AQ9ULE3 MIR639-201ENST00000384974 98 ntBASIC31.79■■■□□ 2.68
DENND2AQ9ULE3 AL135925.1-201ENST00000605920 1701 ntBASIC31.79■■■□□ 2.68
DENND2AQ9ULE3 CR559946.2-201ENST00000623684 991 ntBASIC31.79■■■□□ 2.68
DENND2AQ9ULE3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
DENND2AQ9ULE3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
DENND2AQ9ULE3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.78■■■□□ 2.68
DENND2AQ9ULE3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
DENND2AQ9ULE3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
DENND2AQ9ULE3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
DENND2AQ9ULE3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.77■■■□□ 2.68
DENND2AQ9ULE3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
DENND2AQ9ULE3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
DENND2AQ9ULE3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
DENND2AQ9ULE3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
DENND2AQ9ULE3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
DENND2AQ9ULE3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms