Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL35Q9NZE8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL35Q9NZE8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPL35Q9NZE8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.6■□□□□ 0.57
MRPL35Q9NZE8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MRPL35Q9NZE8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPL35Q9NZE8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPL35Q9NZE8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL35Q9NZE8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.58■□□□□ 0.56
MRPL35Q9NZE8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL35Q9NZE8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPL35Q9NZE8 DRD5P2-201ENST00000421395 2012 ntBASIC18.57■□□□□ 0.56
MRPL35Q9NZE8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL35Q9NZE8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL35Q9NZE8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL35Q9NZE8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPL35Q9NZE8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL35Q9NZE8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL35Q9NZE8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MRPL35Q9NZE8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL35Q9NZE8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL35Q9NZE8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
MRPL35Q9NZE8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRPL35Q9NZE8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MRPL35Q9NZE8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.54■□□□□ 0.56
MRPL35Q9NZE8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MRPL35Q9NZE8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL35Q9NZE8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.54■□□□□ 0.56
MRPL35Q9NZE8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
MRPL35Q9NZE8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRPL35Q9NZE8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRPL35Q9NZE8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.53■□□□□ 0.56
MRPL35Q9NZE8 AL135925.1-201ENST00000605920 1701 ntBASIC18.53■□□□□ 0.56
MRPL35Q9NZE8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL35Q9NZE8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL35Q9NZE8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL35Q9NZE8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MRPL35Q9NZE8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MRPL35Q9NZE8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL35Q9NZE8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL35Q9NZE8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MRPL35Q9NZE8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.5■□□□□ 0.55
MRPL35Q9NZE8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 AC006077.2-201ENST00000623591 457 ntBASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
MRPL35Q9NZE8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.48■□□□□ 0.55
MRPL35Q9NZE8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL35Q9NZE8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MRPL35Q9NZE8 AL139393.2-201ENST00000608721 2025 ntBASIC18.47■□□□□ 0.55
MRPL35Q9NZE8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.46■□□□□ 0.54
MRPL35Q9NZE8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL35Q9NZE8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPL35Q9NZE8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPL35Q9NZE8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.44■□□□□ 0.54
MRPL35Q9NZE8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
MRPL35Q9NZE8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL35Q9NZE8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL35Q9NZE8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL35Q9NZE8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL35Q9NZE8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL35Q9NZE8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL35Q9NZE8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL35Q9NZE8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MRPL35Q9NZE8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL35Q9NZE8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.41■□□□□ 0.54
MRPL35Q9NZE8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL35Q9NZE8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL35Q9NZE8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
MRPL35Q9NZE8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL35Q9NZE8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL35Q9NZE8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL35Q9NZE8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL35Q9NZE8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL35Q9NZE8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL35Q9NZE8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.38■□□□□ 0.53
MRPL35Q9NZE8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
MRPL35Q9NZE8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MRPL35Q9NZE8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL35Q9NZE8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL35Q9NZE8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL35Q9NZE8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.36■□□□□ 0.53
MRPL35Q9NZE8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MRPL35Q9NZE8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL35Q9NZE8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL35Q9NZE8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.35■□□□□ 0.53
MRPL35Q9NZE8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL35Q9NZE8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL35Q9NZE8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL35Q9NZE8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL35Q9NZE8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MRPL35Q9NZE8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL35Q9NZE8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MRPL35Q9NZE8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms