Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.43□□□□□ -1.862e-26■■■□□ 14.6
DDX21Q9NR30 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC9.51□□□□□ -0.892e-8■■■□□ 14.6
DDX21Q9NR30 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.92e-8■■■□□ 14.6
DDX21Q9NR30 KIF6-205ENST00000458470 8611 ntTSL 1 (best)8.49□□□□□ -1.052e-8■■■□□ 14.6
DDX21Q9NR30 RPS13-207ENST00000531008 594 ntTSL 26.43□□□□□ -1.385e-12■■□□□ 14.1
DDX21Q9NR30 SNORD14A-201ENST00000606526 91 ntBASIC2.67□□□□□ -1.985e-12■■□□□ 14.1
DDX21Q9NR30 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.67■■□□□ 1.548e-6■■□□□ 14
DDX21Q9NR30 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.98■■□□□ 1.118e-6■■□□□ 14
DDX21Q9NR30 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.038e-6■■□□□ 14
DDX21Q9NR30 ACAP3-206ENST00000467278 2725 ntTSL 1 (best)20.37■□□□□ 0.858e-6■■□□□ 14
DDX21Q9NR30 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.86■□□□□ 0.778e-6■■□□□ 14
DDX21Q9NR30 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.85■□□□□ 0.778e-6■■□□□ 14
DDX21Q9NR30 ACAP3-212ENST00000492936 5319 ntTSL 1 (best)19.69■□□□□ 0.748e-6■■□□□ 14
DDX21Q9NR30 PRKN-207ENST00000479615 904 ntTSL 519.61■□□□□ 0.738e-6■■□□□ 14
DDX21Q9NR30 RTN4-210ENST00000427710 589 ntTSL 419.31■□□□□ 0.688e-6■■□□□ 14
DDX21Q9NR30 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.46■□□□□ 0.388e-6■■□□□ 14
DDX21Q9NR30 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.87■□□□□ 0.138e-6■■□□□ 14
DDX21Q9NR30 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.298e-6■■□□□ 14
DDX21Q9NR30 CSNK1D-221ENST00000582844 957 ntTSL 527.76■■■□□ 2.036e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.536e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.38■■□□□ 1.176e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-205ENST00000403276 1040 ntTSL 221.86■■□□□ 1.096e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-223ENST00000584472 586 ntTSL 420.57■□□□□ 0.886e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-213ENST00000580446 612 ntTSL 319.78■□□□□ 0.766e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-219ENST00000581660 611 ntTSL 518.98■□□□□ 0.636e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-211ENST00000579316 692 ntTSL 218.98■□□□□ 0.636e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-218ENST00000581655 549 ntTSL 417.13■□□□□ 0.336e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.256e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-207ENST00000578194 567 ntTSL 416.4■□□□□ 0.226e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-217ENST00000581241 6094 ntTSL 216.18■□□□□ 0.186e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-226ENST00000585026 563 ntTSL 514.12□□□□□ -0.156e-8■■□□□ 13.9
DDX21Q9NR30 CSNK1D-210ENST00000579308 598 ntTSL 213.97□□□□□ -0.176e-8■■□□□ 13.9
DDX21Q9NR30 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.914e-6■■□□□ 13.7
DDX21Q9NR30 GSE1-216ENST00000637419 2683 ntTSL 523.54■■□□□ 1.364e-6■■□□□ 13.7
DDX21Q9NR30 GOLGA2-209ENST00000490257 1964 ntTSL 222.97■■□□□ 1.278e-8■■□□□ 13.7
DDX21Q9NR30 GOLGA2-203ENST00000458730 704 ntTSL 522.81■■□□□ 1.248e-8■■□□□ 13.7
DDX21Q9NR30 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.164e-6■■□□□ 13.7
DDX21Q9NR30 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.164e-6■■□□□ 13.7
DDX21Q9NR30 DPY30-204ENST00000422413 601 ntTSL 322.32■■□□□ 1.164e-6■■□□□ 13.7
DDX21Q9NR30 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.164e-6■■□□□ 13.7
DDX21Q9NR30 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.62■□□□□ 0.898e-8■■□□□ 13.7
DDX21Q9NR30 GOLGA2-202ENST00000450617 1439 ntTSL 518.79■□□□□ 0.68e-8■■□□□ 13.7
DDX21Q9NR30 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.45■□□□□ 0.388e-8■■□□□ 13.7
DDX21Q9NR30 DPY30-205ENST00000430665 524 ntTSL 517.11■□□□□ 0.334e-6■■□□□ 13.7
DDX21Q9NR30 DPY30-203ENST00000414013 523 ntTSL 316.79■□□□□ 0.284e-6■■□□□ 13.7
DDX21Q9NR30 DPY30-207ENST00000452582 637 ntTSL 314.26□□□□□ -0.134e-6■■□□□ 13.7
DDX21Q9NR30 SND1-213ENST00000486037 695 ntTSL 313.54□□□□□ -0.243e-11■■□□□ 13.7
DDX21Q9NR30 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.268e-8■■□□□ 13.7
DDX21Q9NR30 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.358e-8■■□□□ 13.7
DDX21Q9NR30 SND1-211ENST00000484767 460 ntTSL 410.88□□□□□ -0.673e-11■■□□□ 13.7
DDX21Q9NR30 SND1-216ENST00000492840 472 ntTSL 56.53□□□□□ -1.363e-11■■□□□ 13.7
DDX21Q9NR30 RPS13-203ENST00000525828 664 ntTSL 222.43■■□□□ 1.183e-12■■□□□ 13.7
DDX21Q9NR30 RPS13-204ENST00000526895 561 ntTSL 318.84■□□□□ 0.613e-12■■□□□ 13.7
DDX21Q9NR30 RPS13-201ENST00000228140 491 ntTSL 2 BASIC13.63□□□□□ -0.233e-12■■□□□ 13.7
DDX21Q9NR30 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.463e-12■■□□□ 13.7
DDX21Q9NR30 RPS13-208ENST00000531908 746 ntTSL 26.18□□□□□ -1.423e-12■■□□□ 13.7
DDX21Q9NR30 SCART1-205ENST00000488261 4709 ntTSL 222.74■■□□□ 1.236e-6■■□□□ 13.3
DDX21Q9NR30 SCART1-202ENST00000463137 4756 ntTSL 222.3■■□□□ 1.166e-6■■□□□ 13.3
DDX21Q9NR30 SCART1-204ENST00000482993 4904 ntTSL 222■■□□□ 1.116e-6■■□□□ 13.3
DDX21Q9NR30 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.66e-6■■□□□ 13.3
DDX21Q9NR30 RPS13-209ENST00000533969 355 ntTSL 317.86■□□□□ 0.452e-30■■□□□ 13.2
DDX21Q9NR30 SNORD14B-201ENST00000364533 90 ntBASIC3.57□□□□□ -1.842e-30■■□□□ 13.2
DDX21Q9NR30 HSPA8-208ENST00000526686 740 ntTSL 1 (best)4.62□□□□□ -1.673e-70■■□□□ 13.2
DDX21Q9NR30 SNORD14D-201ENST00000384390 87 ntBASIC2.67□□□□□ -1.983e-70■■□□□ 13.2
DDX21Q9NR30 PFKL-210ENST00000496824 1063 ntTSL 525.71■■□□□ 1.713e-7■■□□□ 12.9
DDX21Q9NR30 PFKL-205ENST00000466134 5986 ntTSL 222.4■■□□□ 1.183e-7■■□□□ 12.9
DDX21Q9NR30 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.993e-7■■□□□ 12.9
DDX21Q9NR30 PFKL-202ENST00000397961 3390 ntTSL 1 (best)17.65■□□□□ 0.423e-7■■□□□ 12.9
DDX21Q9NR30 C22orf34-205ENST00000416411 542 ntTSL 417.89■□□□□ 0.453e-6■■□□□ 12.9
DDX21Q9NR30 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.33■□□□□ 0.043e-6■■□□□ 12.9
DDX21Q9NR30 FAM182B-205ENST00000478164 992 ntTSL 520.79■□□□□ 0.921e-6■■□□□ 12.8
DDX21Q9NR30 FAM182B-207ENST00000582267 832 ntTSL 518.51■□□□□ 0.551e-6■■□□□ 12.8
DDX21Q9NR30 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.072e-7■■□□□ 12.8
DDX21Q9NR30 ANKRD11-211ENST00000566973 442 ntTSL 226.98■■□□□ 1.912e-7■■□□□ 12.8
DDX21Q9NR30 ANKRD11-204ENST00000378332 1982 ntTSL 226.55■■□□□ 1.842e-7■■□□□ 12.8
DDX21Q9NR30 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.012e-7■■□□□ 12.8
DDX21Q9NR30 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.072e-7■■□□□ 12.8
DDX21Q9NR30 ANKRD11-215ENST00000568512 294 ntTSL 211.38□□□□□ -0.592e-7■■□□□ 12.8
DDX21Q9NR30 RPL7A-205ENST00000468019 941 ntTSL 216.96■□□□□ 0.311e-323■■□□□ 12.7
DDX21Q9NR30 RPL7A-207ENST00000489392 966 ntTSL 513.5□□□□□ -0.251e-323■■□□□ 12.7
DDX21Q9NR30 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC10.95□□□□□ -0.661e-323■■□□□ 12.7
DDX21Q9NR30 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.981e-323■■□□□ 12.7
DDX21Q9NR30 RPL7A-208ENST00000492798 374 ntTSL 1 (best)8.66□□□□□ -1.021e-323■■□□□ 12.7
DDX21Q9NR30 RPL7A-204ENST00000463740 1164 ntTSL 58.45□□□□□ -1.061e-323■■□□□ 12.7
DDX21Q9NR30 SNORD36C-201ENST00000516733 66 ntBASIC1.38□□□□□ -2.191e-323■■□□□ 12.7
DDX21Q9NR30 MT-RNR1-201ENST00000389680 954 ntBASIC7.41□□□□□ -1.221e-323■■□□□ 12.7
DDX21Q9NR30 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.14■■□□□ 1.622e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.032e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC17.54■□□□□ 0.42e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC15.88■□□□□ 0.132e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-203ENST00000524552 963 ntTSL 1 (best)15.53■□□□□ 0.082e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC15.04■□□□□ -02e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.012e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-215ENST00000532091 2301 ntTSL 512.34□□□□□ -0.432e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.442e-70■■□□□ 12.7
DDX21Q9NR30 HSPA8-220ENST00000533238 465 ntTSL 38.19□□□□□ -1.12e-70■■□□□ 12.7
DDX21Q9NR30 UBAP2-206ENST00000412543 1349 ntTSL 510.34□□□□□ -0.753e-8■■□□□ 12.6
DDX21Q9NR30 UBAP2-212ENST00000629575 3460 ntTSL 29.53□□□□□ -0.883e-8■■□□□ 12.6
DDX21Q9NR30 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.923e-8■■□□□ 12.6
DDX21Q9NR30 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.033e-8■■□□□ 12.6
Retrieved 100 of 1,140 protein–RNA pairs in 131.1 ms