RNA–Protein interactions for RNA: ENST00000525828.1

RPS13-203, Transcript of ribosomal protein S13, humanhuman

TSL 2

Gene RPS13, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-203ENST00000525828 NISCHQ9Y2I1 1504 aa42.9■■■■■ 4.46
RPS13-203ENST00000525828 CCDC180Q9P1Z9 1646 aa38.5■■■■□ 3.75
RPS13-203ENST00000525828 ABCC9O60706 1549 aa38.17■■■■□ 3.7
RPS13-203ENST00000525828 RB1CC1Q8TDY2 1594 aa36.53■■■■□ 3.44
RPS13-203ENST00000525828 NACADO15069 1562 aa36.36■■■■□ 3.41
RPS13-203ENST00000525828 DCAF8L2P0C7V8 631 aa35.98■■■■□ 3.35
RPS13-203ENST00000525828 MYO15BQ96JP2 1530 aa35.98■■■■□ 3.35
RPS13-203ENST00000525828 UNC13AQ9UPW8 1703 aa35.66■■■■□ 3.3
RPS13-203ENST00000525828 DNAJC5BQ9UF47 199 aa35.64■■■■□ 3.3
RPS13-203ENST00000525828 ZCCHC6Q5VYS8 1495 aaKnown RBP35.6■■■■□ 3.29
RPS13-203ENST00000525828 DCAF1Q9Y4B6 1507 aa35.55■■■■□ 3.28
RPS13-203ENST00000525828 PABPN1Q86U42 306 aaKnown RBP eCLIP35.52■■■■□ 3.28
RPS13-203ENST00000525828 BICRAQ9NZM4 1560 aa35.42■■■■□ 3.26
RPS13-203ENST00000525828 SHROOM4Q9ULL8 1493 aa35.12■■■■□ 3.21
RPS13-203ENST00000525828 SCRIBQ14160 1630 aa34.95■■■■□ 3.18
RPS13-203ENST00000525828 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
RPS13-203ENST00000525828 EIF4G1Q04637 1599 aaKnown RBP34.54■■■■□ 3.12
RPS13-203ENST00000525828 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
RPS13-203ENST00000525828 NCAPD3P42695 1498 aa33.54■■■□□ 2.96
RPS13-203ENST00000525828 SMARCA4P51532 1647 aa33.42■■■□□ 2.94
RPS13-203ENST00000525828 ATAD2BQ9ULI0 1458 aa33.42■■■□□ 2.94
RPS13-203ENST00000525828 SMARCA2P51531 1590 aa33.38■■■□□ 2.93
RPS13-203ENST00000525828 BAZ1AQ9NRL2 1556 aaPredicted RBP33.32■■■□□ 2.92
RPS13-203ENST00000525828 HMGXB3Q12766 1538 aa33.32■■■□□ 2.92
RPS13-203ENST00000525828 PEG3Q9GZU2 1588 aa33.17■■■□□ 2.9
RPS13-203ENST00000525828 BAZ1BQ9UIG0 1483 aaKnown RBP33.09■■■□□ 2.89
RPS13-203ENST00000525828 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
RPS13-203ENST00000525828 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
RPS13-203ENST00000525828 CUX2O14529 1486 aa32.97■■■□□ 2.87
RPS13-203ENST00000525828 NESP48681 1621 aa32.83■■■□□ 2.85
RPS13-203ENST00000525828 LAMC3Q9Y6N6 1575 aa32.77■■■□□ 2.84
RPS13-203ENST00000525828 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
RPS13-203ENST00000525828 WIZO95785 1651 aa32.6■■■□□ 2.81
RPS13-203ENST00000525828 PDS5BQ9NTI5 1447 aa32.56■■■□□ 2.8
RPS13-203ENST00000525828 THOC2Q8NI27 1593 aaKnown RBP32.55■■■□□ 2.8
RPS13-203ENST00000525828 CADPSQ9ULU8 1353 aa32.5■■■□□ 2.79
RPS13-203ENST00000525828 KIF21AQ7Z4S6 1674 aa32.46■■■□□ 2.79
RPS13-203ENST00000525828 RSF1Q96T23 1441 aaPredicted RBP32.4■■■□□ 2.78
RPS13-203ENST00000525828 TOP2AP11388 1531 aaKnown RBP32.27■■■□□ 2.76
RPS13-203ENST00000525828 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
RPS13-203ENST00000525828 CFTRP13569 1480 aa32.18■■■□□ 2.74
RPS13-203ENST00000525828 WDR62O43379 1518 aa32.18■■■□□ 2.74
RPS13-203ENST00000525828 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.74
RPS13-203ENST00000525828 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
RPS13-203ENST00000525828 PRDM2Q13029 1718 aa31.89■■■□□ 2.7
RPS13-203ENST00000525828 CCDC88BA6NC98 1476 aa31.86■■■□□ 2.69
RPS13-203ENST00000525828 URB2Q14146 1524 aaKnown RBP31.81■■■□□ 2.68
RPS13-203ENST00000525828 ABCC8Q09428 1581 aa31.56■■■□□ 2.64
RPS13-203ENST00000525828 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
RPS13-203ENST00000525828 TOPBP1Q92547 1522 aa31.51■■■□□ 2.63
RPS13-203ENST00000525828 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
RPS13-203ENST00000525828 OSCARQ8IYS5 282 aa31.44■■■□□ 2.62
RPS13-203ENST00000525828 ZNF608Q9ULD9 1512 aaPredicted RBP31.36■■■□□ 2.61
RPS13-203ENST00000525828 EIF4G3O43432 1585 aaKnown RBP31.25■■■□□ 2.59
RPS13-203ENST00000525828 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
RPS13-203ENST00000525828 TRIM41Q8WV44 630 aa31.21■■■□□ 2.59
RPS13-203ENST00000525828 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
RPS13-203ENST00000525828 AQRO60306 1485 aaKnown RBP eCLIP31.1■■■□□ 2.572e-8■■■■■ 39.2
RPS13-203ENST00000525828 SOGA1O94964 1423 aa31.06■■■□□ 2.56
RPS13-203ENST00000525828 WDR97A6NE52 1622 aa31.05■■■□□ 2.56
RPS13-203ENST00000525828 RAD54L2Q9Y4B4 1467 aa31.02■■■□□ 2.56
RPS13-203ENST00000525828 CUX1P39880 1505 aa31.01■■■□□ 2.55
RPS13-203ENST00000525828 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.55
RPS13-203ENST00000525828 RIMBP3CA6NJZ7 1639 aa30.99■■■□□ 2.55
RPS13-203ENST00000525828 RIMBP3BA6NNM3 1639 aa30.99■■■□□ 2.55
RPS13-203ENST00000525828 RIMBP3Q9UFD9 1639 aa30.99■■■□□ 2.55
RPS13-203ENST00000525828 CHD1O14646 1710 aa30.97■■■□□ 2.55
RPS13-203ENST00000525828 SUPT5HO00267 1087 aaKnown RBP30.95■■■□□ 2.55
RPS13-203ENST00000525828 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
RPS13-203ENST00000525828 ARHGEF11O15085 1522 aa30.92■■■□□ 2.54
RPS13-203ENST00000525828 FBLN2P98095 1184 aa30.82■■■□□ 2.52
RPS13-203ENST00000525828 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.52
RPS13-203ENST00000525828 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
RPS13-203ENST00000525828 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
RPS13-203ENST00000525828 ABCA10Q8WWZ4 1543 aa30.73■■■□□ 2.51
RPS13-203ENST00000525828 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.5
RPS13-203ENST00000525828 CHMP7Q8WUX9 453 aaPredicted RBP30.69■■■□□ 2.5
RPS13-203ENST00000525828 SYNJ2O15056 1496 aa30.69■■■□□ 2.5
RPS13-203ENST00000525828 SYNJ1O43426 1573 aa30.67■■■□□ 2.5
RPS13-203ENST00000525828 PBRM1Q86U86 1689 aa30.67■■■□□ 2.5
RPS13-203ENST00000525828 CLASP1Q7Z460 1538 aa30.66■■■□□ 2.5
RPS13-203ENST00000525828 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
RPS13-203ENST00000525828 CYB5RLQ6IPT4 315 aa30.62■■■□□ 2.49
RPS13-203ENST00000525828 WRNQ14191 1432 aaPredicted RBP eCLIP30.62■■■□□ 2.492e-9■□□□□ 10.3
RPS13-203ENST00000525828 BIVM-ERCC5R4GMW8 1640 aa30.62■■■□□ 2.49
RPS13-203ENST00000525828 ARAP1Q96P48 1450 aa30.61■■■□□ 2.49
RPS13-203ENST00000525828 TOP2BQ02880 1626 aa30.6■■■□□ 2.49
RPS13-203ENST00000525828 ADAMTS12P58397 1594 aa30.4■■■□□ 2.46
RPS13-203ENST00000525828 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
RPS13-203ENST00000525828 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
RPS13-203ENST00000525828 FHAD1B1AJZ9 1412 aa30.33■■■□□ 2.45
RPS13-203ENST00000525828 NUP160Q12769 1436 aa30.3■■■□□ 2.44
RPS13-203ENST00000525828 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
RPS13-203ENST00000525828 TRHP20396 242 aaPredicted RBP30.21■■■□□ 2.43
RPS13-203ENST00000525828 SHROOM2Q13796 1616 aa30.17■■■□□ 2.42
RPS13-203ENST00000525828 ERCC6L2Q5T890 1561 aa30.1■■■□□ 2.41
RPS13-203ENST00000525828 KIF27Q86VH2 1401 aa30.01■■■□□ 2.39
RPS13-203ENST00000525828 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
RPS13-203ENST00000525828 CUL7Q14999 1698 aa29.95■■■□□ 2.39
RPS13-203ENST00000525828 IGF1RP08069 1367 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 1010.3 ms