RNA–Protein interactions for RNA: ENST00000637419.1

GSE1-216, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-216ENST00000637419 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
GSE1-216ENST00000637419 SHROOM4Q9ULL8 1493 aa34.83■■■■□ 3.17
GSE1-216ENST00000637419 SUPT5HO00267 1087 aaKnown RBP34.37■■■■□ 3.09
GSE1-216ENST00000637419 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.03
GSE1-216ENST00000637419 MYO15BQ96JP2 1530 aa33.65■■■□□ 2.98
GSE1-216ENST00000637419 CCDC180Q9P1Z9 1646 aa33.63■■■□□ 2.97
GSE1-216ENST00000637419 CHIC1Q5VXU3 224 aa33.57■■■□□ 2.97
GSE1-216ENST00000637419 HRCP23327 699 aa33.4■■■□□ 2.94
GSE1-216ENST00000637419 DCAF8L2P0C7V8 631 aa33.36■■■□□ 2.93
GSE1-216ENST00000637419 PCGF6Q9BYE7 350 aa33.15■■■□□ 2.9
GSE1-216ENST00000637419 PPARGC1BQ86YN6 1023 aaKnown RBP32.84■■■□□ 2.85
GSE1-216ENST00000637419 LOC105371045A0A1W2PR82 267 aa32.74■■■□□ 2.83
GSE1-216ENST00000637419 DCAF1Q9Y4B6 1507 aa32.68■■■□□ 2.82
GSE1-216ENST00000637419 TRIM26Q12899 539 aaPredicted RBP32.24■■■□□ 2.75
GSE1-216ENST00000637419 ABCC9O60706 1549 aa32.13■■■□□ 2.73
GSE1-216ENST00000637419 RSF1Q96T23 1441 aaPredicted RBP31.97■■■□□ 2.71
GSE1-216ENST00000637419 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
GSE1-216ENST00000637419 TRIM41Q8WV44 630 aa31.86■■■□□ 2.69
GSE1-216ENST00000637419 FAM9AQ8IZU1 332 aaPredicted RBP31.79■■■□□ 2.68
GSE1-216ENST00000637419 RB1CC1Q8TDY2 1594 aa31.74■■■□□ 2.67
GSE1-216ENST00000637419 ZEB1P37275 1124 aaPredicted RBP31.64■■■□□ 2.66
GSE1-216ENST00000637419 EHMT2Q96KQ7 1210 aa31.63■■■□□ 2.65
GSE1-216ENST00000637419 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
GSE1-216ENST00000637419 MROH2BQ7Z745 1585 aa31.25■■■□□ 2.59
GSE1-216ENST00000637419 SCAF1Q9H7N4 1312 aaKnown RBP31.19■■■□□ 2.58
GSE1-216ENST00000637419 WIZO95785 1651 aa31.12■■■□□ 2.57
GSE1-216ENST00000637419 NACADO15069 1562 aa31.02■■■□□ 2.56
GSE1-216ENST00000637419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.01■■■□□ 2.56
GSE1-216ENST00000637419 CCER1Q8TC90 406 aaPredicted RBP30.87■■■□□ 2.53
GSE1-216ENST00000637419 PELP1Q8IZL8 1130 aaKnown RBP30.87■■■□□ 2.53
GSE1-216ENST00000637419 BAZ1AQ9NRL2 1556 aaPredicted RBP30.84■■■□□ 2.53
GSE1-216ENST00000637419 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
GSE1-216ENST00000637419 TTBK1Q5TCY1 1321 aaPredicted RBP30.72■■■□□ 2.51
GSE1-216ENST00000637419 ABCC8Q09428 1581 aa30.67■■■□□ 2.5
GSE1-216ENST00000637419 CCDC88BA6NC98 1476 aa30.64■■■□□ 2.5
GSE1-216ENST00000637419 NEUROD1Q13562 356 aa30.63■■■□□ 2.49
GSE1-216ENST00000637419 ACIN1Q9UKV3 1341 aaKnown RBP30.63■■■□□ 2.49
GSE1-216ENST00000637419 DIEXFQ68CQ4 756 aaKnown RBP30.55■■■□□ 2.48
GSE1-216ENST00000637419 WRNQ14191 1432 aaPredicted RBP eCLIP30.53■■■□□ 2.482e-6■■■■□ 23.2
GSE1-216ENST00000637419 CEP162Q5TB80 1403 aa30.53■■■□□ 2.48
GSE1-216ENST00000637419 TOP2AP11388 1531 aaKnown RBP30.51■■■□□ 2.47
GSE1-216ENST00000637419 SOGA1O94964 1423 aa30.5■■■□□ 2.47
GSE1-216ENST00000637419 SMARCA2P51531 1590 aa30.42■■■□□ 2.46
GSE1-216ENST00000637419 SMARCA4P51532 1647 aa30.39■■■□□ 2.45
GSE1-216ENST00000637419 TNIKQ9UKE5 1360 aa30.37■■■□□ 2.45
GSE1-216ENST00000637419 RUSC2Q8N2Y8 1516 aa30.36■■■□□ 2.45
GSE1-216ENST00000637419 GTF3C3Q9Y5Q9 886 aa30.36■■■□□ 2.45
GSE1-216ENST00000637419 UBTFP17480 764 aaKnown RBP30.3■■■□□ 2.44
GSE1-216ENST00000637419 CSRNP3Q8WYN3 585 aa30.3■■■□□ 2.44
GSE1-216ENST00000637419 CENPBP07199 599 aaPredicted RBP30.28■■■□□ 2.44
GSE1-216ENST00000637419 EEA1Q15075 1411 aa30.16■■■□□ 2.42
GSE1-216ENST00000637419 ZNF316A6NFI3 1004 aaPredicted RBP30.15■■■□□ 2.42
GSE1-216ENST00000637419 UNC13AQ9UPW8 1703 aa30.11■■■□□ 2.41
GSE1-216ENST00000637419 GOLGA3Q08378 1498 aa30.09■■■□□ 2.41
GSE1-216ENST00000637419 HNRNPUL2Q1KMD3 747 aaKnown RBP30.01■■■□□ 2.4
GSE1-216ENST00000637419 YTHDC1Q96MU7 727 aaKnown RBP29.99■■■□□ 2.39
GSE1-216ENST00000637419 PABPN1Q86U42 306 aaKnown RBP eCLIP29.91■■■□□ 2.38
GSE1-216ENST00000637419 MIER1Q8N108 512 aa29.89■■■□□ 2.38
GSE1-216ENST00000637419 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
GSE1-216ENST00000637419 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
GSE1-216ENST00000637419 CLIP1P30622 1438 aa29.84■■■□□ 2.37
GSE1-216ENST00000637419 KIF21BO75037 1637 aa29.78■■■□□ 2.36
GSE1-216ENST00000637419 RANGAP1P46060 587 aaPredicted RBP29.74■■■□□ 2.35
GSE1-216ENST00000637419 VPS8Q8N3P4 1428 aa29.74■■■□□ 2.35
GSE1-216ENST00000637419 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
GSE1-216ENST00000637419 RAPGEF2Q9Y4G8 1499 aa29.69■■■□□ 2.34
GSE1-216ENST00000637419 PEG3Q9GZU2 1588 aa29.68■■■□□ 2.34
GSE1-216ENST00000637419 APLP2Q06481 763 aa29.65■■■□□ 2.34
GSE1-216ENST00000637419 BAZ1BQ9UIG0 1483 aaKnown RBP29.58■■■□□ 2.33
GSE1-216ENST00000637419 ATAD2BQ9ULI0 1458 aa29.52■■■□□ 2.32
GSE1-216ENST00000637419 DHX57Q6P158 1386 aaKnown RBP29.39■■■□□ 2.29
GSE1-216ENST00000637419 KANK4Q5T7N3 995 aaPredicted RBP29.35■■■□□ 2.29
GSE1-216ENST00000637419 TOP2BQ02880 1626 aa29.35■■■□□ 2.29
GSE1-216ENST00000637419 MYT1Q01538 1121 aa29.34■■■□□ 2.29
GSE1-216ENST00000637419 ARAP1Q96P48 1450 aa29.3■■■□□ 2.28
GSE1-216ENST00000637419 CLSPNQ9HAW4 1339 aa29.28■■■□□ 2.28
GSE1-216ENST00000637419 PRXQ9BXM0 1461 aa29.24■■■□□ 2.27
GSE1-216ENST00000637419 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.26
GSE1-216ENST00000637419 BIVM-ERCC5R4GMW8 1640 aa29.19■■■□□ 2.26
GSE1-216ENST00000637419 RRBP1Q9P2E9 1410 aaKnown RBP29.11■■■□□ 2.25
GSE1-216ENST00000637419 SUPT16HQ9Y5B9 1047 aaKnown RBP29.09■■■□□ 2.25
GSE1-216ENST00000637419 ITGAEP38570 1179 aa29.05■■■□□ 2.24
GSE1-216ENST00000637419 CUX1P39880 1505 aa29.03■■■□□ 2.24
GSE1-216ENST00000637419 CCNB3Q8WWL7 1395 aa29■■■□□ 2.23
GSE1-216ENST00000637419 CUX2O14529 1486 aa28.98■■■□□ 2.23
GSE1-216ENST00000637419 KIF27Q86VH2 1401 aa28.97■■■□□ 2.23
GSE1-216ENST00000637419 ARHGAP35Q9NRY4 1499 aa28.97■■■□□ 2.23
GSE1-216ENST00000637419 KCNH8Q96L42 1107 aa28.93■■■□□ 2.22
GSE1-216ENST00000637419 RAB3GAP2Q9H2M9 1393 aa28.86■■■□□ 2.21
GSE1-216ENST00000637419 MAPKBP1O60336 1514 aa28.82■■■□□ 2.2
GSE1-216ENST00000637419 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
GSE1-216ENST00000637419 TSHZ2Q9NRE2 1034 aa28.76■■■□□ 2.19
GSE1-216ENST00000637419 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
GSE1-216ENST00000637419 CFTRP13569 1480 aa28.73■■■□□ 2.19
GSE1-216ENST00000637419 SIN3AQ96ST3 1273 aa28.69■■■□□ 2.18
GSE1-216ENST00000637419 IGF1RP08069 1367 aa28.69■■■□□ 2.18
GSE1-216ENST00000637419 TIAM1Q13009 1591 aa28.68■■■□□ 2.18
GSE1-216ENST00000637419 SETD5Q9C0A6 1442 aa28.66■■■□□ 2.18
GSE1-216ENST00000637419 DDX10Q13206 875 aaKnown RBP28.66■■■□□ 2.18
GSE1-216ENST00000637419 PHLDB1Q86UU1 1377 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms