RNA–Protein interactions for RNA: ENST00000389680.2

MT-RNR1-201, mitochondrially encoded 12S RNA, humanhuman

BASIC

Gene MT-RNR1, Length 954 nt, Biotype Mt rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-RNR1-201ENST00000389680 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
MT-RNR1-201ENST00000389680 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
MT-RNR1-201ENST00000389680 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
MT-RNR1-201ENST00000389680 SENP3Q9H4L4 574 aaPredicted RBP22.2■■□□□ 1.14
MT-RNR1-201ENST00000389680 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
MT-RNR1-201ENST00000389680 FOXD1Q16676 465 aa20.52■□□□□ 0.88
MT-RNR1-201ENST00000389680 ADRA2BP18089 450 aa20.14■□□□□ 0.81
MT-RNR1-201ENST00000389680 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
MT-RNR1-201ENST00000389680 PIAS4Q8N2W9 510 aaPredicted RBP19.5■□□□□ 0.71
MT-RNR1-201ENST00000389680 KCNA4P22459 653 aa19.04■□□□□ 0.64
MT-RNR1-201ENST00000389680 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
MT-RNR1-201ENST00000389680 MSH5O43196 834 aa18.75■□□□□ 0.59
MT-RNR1-201ENST00000389680 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
MT-RNR1-201ENST00000389680 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
MT-RNR1-201ENST00000389680 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
MT-RNR1-201ENST00000389680 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
MT-RNR1-201ENST00000389680 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
MT-RNR1-201ENST00000389680 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
MT-RNR1-201ENST00000389680 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
MT-RNR1-201ENST00000389680 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
MT-RNR1-201ENST00000389680 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
MT-RNR1-201ENST00000389680 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
MT-RNR1-201ENST00000389680 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
MT-RNR1-201ENST00000389680 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
MT-RNR1-201ENST00000389680 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
MT-RNR1-201ENST00000389680 ZBTB22O15209 634 aa17.51■□□□□ 0.39
MT-RNR1-201ENST00000389680 FOXD4L1Q9NU39 408 aa17.4■□□□□ 0.38
MT-RNR1-201ENST00000389680 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
MT-RNR1-201ENST00000389680 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
MT-RNR1-201ENST00000389680 MYCNP04198 464 aaPredicted RBP16.91■□□□□ 0.3
MT-RNR1-201ENST00000389680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.28
MT-RNR1-201ENST00000389680 ATXN8OSP0DMR3 200 aa16.75■□□□□ 0.27
MT-RNR1-201ENST00000389680 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
MT-RNR1-201ENST00000389680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
MT-RNR1-201ENST00000389680 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
MT-RNR1-201ENST00000389680 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
MT-RNR1-201ENST00000389680 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
MT-RNR1-201ENST00000389680 APLP2Q06481 763 aa16.28■□□□□ 0.2
MT-RNR1-201ENST00000389680 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
MT-RNR1-201ENST00000389680 FKBP8Q14318 412 aa16.11■□□□□ 0.17
MT-RNR1-201ENST00000389680 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
MT-RNR1-201ENST00000389680 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
MT-RNR1-201ENST00000389680 C1QBPQ07021 282 aaKnown RBP15.95■□□□□ 0.14
MT-RNR1-201ENST00000389680 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
MT-RNR1-201ENST00000389680 CAPN15O75808 1086 aa15.9■□□□□ 0.14
MT-RNR1-201ENST00000389680 POLA2Q14181 598 aa15.78■□□□□ 0.12
MT-RNR1-201ENST00000389680 FBLN2P98095 1184 aa15.73■□□□□ 0.11
MT-RNR1-201ENST00000389680 MKRN4PQ13434 485 aaPredicted RBP15.71■□□□□ 0.11
MT-RNR1-201ENST00000389680 ABCB7O75027 752 aa15.63■□□□□ 0.09
MT-RNR1-201ENST00000389680 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
MT-RNR1-201ENST00000389680 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
MT-RNR1-201ENST00000389680 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
MT-RNR1-201ENST00000389680 AMER1Q5JTC6 1135 aaPredicted RBP15.55■□□□□ 0.08
MT-RNR1-201ENST00000389680 DSG3P32926 999 aa15.49■□□□□ 0.07
MT-RNR1-201ENST00000389680 RTN4Q9NQC3 1192 aaKnown RBP15.49■□□□□ 0.07
MT-RNR1-201ENST00000389680 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
MT-RNR1-201ENST00000389680 PROM2Q8N271 834 aa15.41■□□□□ 0.06
MT-RNR1-201ENST00000389680 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
MT-RNR1-201ENST00000389680 ZNF692Q9BU19 519 aaPredicted RBP15.21■□□□□ 0.03
MT-RNR1-201ENST00000389680 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
MT-RNR1-201ENST00000389680 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
MT-RNR1-201ENST00000389680 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
MT-RNR1-201ENST00000389680 VASPP50552 380 aaPredicted RBP15.18■□□□□ 0.02
MT-RNR1-201ENST00000389680 SSUH2Q9Y2M2 353 aa15.1■□□□□ 0.01
MT-RNR1-201ENST00000389680 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
MT-RNR1-201ENST00000389680 IFNLR1Q8IU57 520 aaPredicted RBP14.99□□□□□ -0.01
MT-RNR1-201ENST00000389680 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
MT-RNR1-201ENST00000389680 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
MT-RNR1-201ENST00000389680 PLCD3Q8N3E9 789 aa14.83□□□□□ -0.04
MT-RNR1-201ENST00000389680 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
MT-RNR1-201ENST00000389680 MIER1Q8N108 512 aa14.78□□□□□ -0.04
MT-RNR1-201ENST00000389680 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
MT-RNR1-201ENST00000389680 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
MT-RNR1-201ENST00000389680 PLEKHG5O94827 1062 aa14.69□□□□□ -0.06
MT-RNR1-201ENST00000389680 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
MT-RNR1-201ENST00000389680 PKD2Q13563 968 aa14.67□□□□□ -0.06
MT-RNR1-201ENST00000389680 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
MT-RNR1-201ENST00000389680 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
MT-RNR1-201ENST00000389680 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
MT-RNR1-201ENST00000389680 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
MT-RNR1-201ENST00000389680 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
MT-RNR1-201ENST00000389680 ECM2O94769 699 aaPredicted RBP14.52□□□□□ -0.09
MT-RNR1-201ENST00000389680 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
MT-RNR1-201ENST00000389680 CIZ1Q9ULV3 898 aaPredicted RBP14.45□□□□□ -0.1
MT-RNR1-201ENST00000389680 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
MT-RNR1-201ENST00000389680 PITPNM1O00562 1244 aa14.37□□□□□ -0.11
MT-RNR1-201ENST00000389680 PLCB2Q00722 1185 aa14.36□□□□□ -0.11
MT-RNR1-201ENST00000389680 RGL2O15211 777 aa14.35□□□□□ -0.11
MT-RNR1-201ENST00000389680 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
MT-RNR1-201ENST00000389680 NUBP1P53384 320 aa14.32□□□□□ -0.12
MT-RNR1-201ENST00000389680 GSE1Q14687 1217 aa14.32□□□□□ -0.12
MT-RNR1-201ENST00000389680 POTEHQ6S545 545 aa14.31□□□□□ -0.12
MT-RNR1-201ENST00000389680 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
MT-RNR1-201ENST00000389680 DCAF8Q5TAQ9 597 aa14.26□□□□□ -0.13
MT-RNR1-201ENST00000389680 BBXQ8WY36 941 aaPredicted RBP14.23□□□□□ -0.13
MT-RNR1-201ENST00000389680 FAM212AQ96EL1 285 aa14.23□□□□□ -0.13
MT-RNR1-201ENST00000389680 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
MT-RNR1-201ENST00000389680 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.22□□□□□ -0.13
MT-RNR1-201ENST00000389680 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
MT-RNR1-201ENST00000389680 CHGAP10645 457 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms