RNA–Protein interactions for RNA: ENST00000531908.5

RPS13-208, Transcript of ribosomal protein S13, humanhuman

TSL 2

Gene RPS13, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-208ENST00000531908 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
RPS13-208ENST00000531908 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
RPS13-208ENST00000531908 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
RPS13-208ENST00000531908 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
RPS13-208ENST00000531908 PLPPR3Q6T4P5 718 aa20.01■□□□□ 0.79
RPS13-208ENST00000531908 FOXD1Q16676 465 aa19.46■□□□□ 0.71
RPS13-208ENST00000531908 ADRA2BP18089 450 aa18.87■□□□□ 0.61
RPS13-208ENST00000531908 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
RPS13-208ENST00000531908 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
RPS13-208ENST00000531908 MSH5O43196 834 aa18■□□□□ 0.47
RPS13-208ENST00000531908 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
RPS13-208ENST00000531908 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
RPS13-208ENST00000531908 KCNA4P22459 653 aa17.36■□□□□ 0.37
RPS13-208ENST00000531908 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
RPS13-208ENST00000531908 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
RPS13-208ENST00000531908 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
RPS13-208ENST00000531908 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
RPS13-208ENST00000531908 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
RPS13-208ENST00000531908 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
RPS13-208ENST00000531908 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
RPS13-208ENST00000531908 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
RPS13-208ENST00000531908 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
RPS13-208ENST00000531908 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
RPS13-208ENST00000531908 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
RPS13-208ENST00000531908 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
RPS13-208ENST00000531908 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
RPS13-208ENST00000531908 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
RPS13-208ENST00000531908 ZBTB22O15209 634 aa15.9■□□□□ 0.14
RPS13-208ENST00000531908 SLC4A2P04920 1241 aa15.87■□□□□ 0.13
RPS13-208ENST00000531908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.87■□□□□ 0.13
RPS13-208ENST00000531908 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
RPS13-208ENST00000531908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
RPS13-208ENST00000531908 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
RPS13-208ENST00000531908 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
RPS13-208ENST00000531908 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
RPS13-208ENST00000531908 ATXN8OSP0DMR3 200 aa15.47■□□□□ 0.07
RPS13-208ENST00000531908 APLP2Q06481 763 aa15.42■□□□□ 0.06
RPS13-208ENST00000531908 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
RPS13-208ENST00000531908 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
RPS13-208ENST00000531908 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
RPS13-208ENST00000531908 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
RPS13-208ENST00000531908 CAPN15O75808 1086 aa15.06■□□□□ 0
RPS13-208ENST00000531908 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
RPS13-208ENST00000531908 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
RPS13-208ENST00000531908 CACNB1Q02641 598 aaPredicted RBP14.9□□□□□ -0.02
RPS13-208ENST00000531908 POLA2Q14181 598 aa14.79□□□□□ -0.04
RPS13-208ENST00000531908 ABCB7O75027 752 aa14.72□□□□□ -0.05
RPS13-208ENST00000531908 FBLN2P98095 1184 aa14.7□□□□□ -0.06
RPS13-208ENST00000531908 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
RPS13-208ENST00000531908 DSG3P32926 999 aa14.67□□□□□ -0.06
RPS13-208ENST00000531908 FKBP8Q14318 412 aa14.56□□□□□ -0.08
RPS13-208ENST00000531908 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
RPS13-208ENST00000531908 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
RPS13-208ENST00000531908 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
RPS13-208ENST00000531908 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
RPS13-208ENST00000531908 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
RPS13-208ENST00000531908 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
RPS13-208ENST00000531908 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
RPS13-208ENST00000531908 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
RPS13-208ENST00000531908 FBXO3Q9UK99 471 aa14.11□□□□□ -0.15
RPS13-208ENST00000531908 PROM2Q8N271 834 aa14.08□□□□□ -0.16
RPS13-208ENST00000531908 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
RPS13-208ENST00000531908 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
RPS13-208ENST00000531908 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
RPS13-208ENST00000531908 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
RPS13-208ENST00000531908 VASPP50552 380 aaPredicted RBP13.8□□□□□ -0.2
RPS13-208ENST00000531908 SPDYE1Q8NFV5 336 aaPredicted RBP13.8□□□□□ -0.2
RPS13-208ENST00000531908 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
RPS13-208ENST00000531908 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
RPS13-208ENST00000531908 CLEC11AQ9Y240 323 aa13.7□□□□□ -0.22
RPS13-208ENST00000531908 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
RPS13-208ENST00000531908 AMER1Q5JTC6 1135 aaPredicted RBP13.68□□□□□ -0.22
RPS13-208ENST00000531908 MIER1Q8N108 512 aa13.67□□□□□ -0.22
RPS13-208ENST00000531908 PRR29P0C7W0 189 aa13.63□□□□□ -0.23
RPS13-208ENST00000531908 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
RPS13-208ENST00000531908 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
RPS13-208ENST00000531908 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
RPS13-208ENST00000531908 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
RPS13-208ENST00000531908 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
RPS13-208ENST00000531908 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
RPS13-208ENST00000531908 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
RPS13-208ENST00000531908 CHRDL2Q6WN34 429 aa13.36□□□□□ -0.27
RPS13-208ENST00000531908 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
RPS13-208ENST00000531908 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPS13-208ENST00000531908 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.29
RPS13-208ENST00000531908 CHADLQ6NUI6 762 aa13.26□□□□□ -0.29
RPS13-208ENST00000531908 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
RPS13-208ENST00000531908 GSE1Q14687 1217 aa13.23□□□□□ -0.29
RPS13-208ENST00000531908 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
RPS13-208ENST00000531908 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
RPS13-208ENST00000531908 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
RPS13-208ENST00000531908 FAM212AQ96EL1 285 aa13.2□□□□□ -0.3
RPS13-208ENST00000531908 NUBP1P53384 320 aa13.19□□□□□ -0.3
RPS13-208ENST00000531908 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
RPS13-208ENST00000531908 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
RPS13-208ENST00000531908 PKD2Q13563 968 aa13.18□□□□□ -0.3
RPS13-208ENST00000531908 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
RPS13-208ENST00000531908 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
RPS13-208ENST00000531908 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
RPS13-208ENST00000531908 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms