Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.54■■□□□ 1.04
S1PR3Q99500 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.54■■□□□ 1.04
S1PR3Q99500 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
S1PR3Q99500 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
S1PR3Q99500 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
S1PR3Q99500 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
S1PR3Q99500 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
S1PR3Q99500 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
S1PR3Q99500 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
S1PR3Q99500 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
S1PR3Q99500 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.52■■□□□ 1.04
S1PR3Q99500 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
S1PR3Q99500 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
S1PR3Q99500 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
S1PR3Q99500 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
S1PR3Q99500 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
S1PR3Q99500 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.51■■□□□ 1.03
S1PR3Q99500 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
S1PR3Q99500 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
S1PR3Q99500 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
S1PR3Q99500 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
S1PR3Q99500 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
S1PR3Q99500 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
S1PR3Q99500 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
S1PR3Q99500 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
S1PR3Q99500 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.47■■□□□ 1.03
S1PR3Q99500 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.47■■□□□ 1.03
S1PR3Q99500 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
S1PR3Q99500 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.47■■□□□ 1.03
S1PR3Q99500 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
S1PR3Q99500 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
S1PR3Q99500 SUZ12P1-203ENST00000578195 985 ntBASIC21.46■■□□□ 1.03
S1PR3Q99500 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
S1PR3Q99500 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.45■■□□□ 1.02
S1PR3Q99500 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
S1PR3Q99500 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
S1PR3Q99500 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
S1PR3Q99500 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
S1PR3Q99500 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
S1PR3Q99500 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
S1PR3Q99500 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
S1PR3Q99500 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
S1PR3Q99500 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
S1PR3Q99500 AC010864.1-201ENST00000609407 1511 ntBASIC21.42■■□□□ 1.02
S1PR3Q99500 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
S1PR3Q99500 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.41■■□□□ 1.02
S1PR3Q99500 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
S1PR3Q99500 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
S1PR3Q99500 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.4■■□□□ 1.02
S1PR3Q99500 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
S1PR3Q99500 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
S1PR3Q99500 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.38■■□□□ 1.01
S1PR3Q99500 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.38■■□□□ 1.01
S1PR3Q99500 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
S1PR3Q99500 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
S1PR3Q99500 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
S1PR3Q99500 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
S1PR3Q99500 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
S1PR3Q99500 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.35■■□□□ 1.01
S1PR3Q99500 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
S1PR3Q99500 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
S1PR3Q99500 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
S1PR3Q99500 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
S1PR3Q99500 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.35■■□□□ 1.01
S1PR3Q99500 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
S1PR3Q99500 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.34■■□□□ 1.01
S1PR3Q99500 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
S1PR3Q99500 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
S1PR3Q99500 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
S1PR3Q99500 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.32■■□□□ 1
S1PR3Q99500 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
S1PR3Q99500 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.31■■□□□ 1
S1PR3Q99500 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
S1PR3Q99500 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
S1PR3Q99500 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
S1PR3Q99500 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
S1PR3Q99500 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.29■■□□□ 1
S1PR3Q99500 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
S1PR3Q99500 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
S1PR3Q99500 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.29■■□□□ 1
S1PR3Q99500 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
S1PR3Q99500 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
S1PR3Q99500 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
S1PR3Q99500 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
S1PR3Q99500 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
S1PR3Q99500 AL139393.2-201ENST00000608721 2025 ntBASIC21.28■■□□□ 1
S1PR3Q99500 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
S1PR3Q99500 MIR762-201ENST00000390236 83 ntBASIC21.28■■□□□ 1
S1PR3Q99500 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
S1PR3Q99500 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
S1PR3Q99500 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
S1PR3Q99500 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
S1PR3Q99500 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.27■■□□□ 1
S1PR3Q99500 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.27■■□□□ 1
S1PR3Q99500 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.27■■□□□ 1
S1PR3Q99500 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.27■■□□□ 1
S1PR3Q99500 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
S1PR3Q99500 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.27■■□□□ 1
S1PR3Q99500 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.27■■□□□ 1
S1PR3Q99500 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms