Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.06■■■□□ 2.72
TRPM4Q8TD43 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.04■■■□□ 2.72
TRPM4Q8TD43 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.03■■■□□ 2.72
TRPM4Q8TD43 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
TRPM4Q8TD43 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
TRPM4Q8TD43 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TRPM4Q8TD43 RARRES2P2-201ENST00000394842 485 ntBASIC32.02■■■□□ 2.72
TRPM4Q8TD43 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.01■■■□□ 2.71
TRPM4Q8TD43 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32■■■□□ 2.71
TRPM4Q8TD43 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
TRPM4Q8TD43 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
TRPM4Q8TD43 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
TRPM4Q8TD43 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32■■■□□ 2.71
TRPM4Q8TD43 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
TRPM4Q8TD43 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
TRPM4Q8TD43 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.98■■■□□ 2.71
TRPM4Q8TD43 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.98■■■□□ 2.71
TRPM4Q8TD43 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TRPM4Q8TD43 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TRPM4Q8TD43 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TRPM4Q8TD43 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TRPM4Q8TD43 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TRPM4Q8TD43 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TRPM4Q8TD43 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TRPM4Q8TD43 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRPM4Q8TD43 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRPM4Q8TD43 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRPM4Q8TD43 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
TRPM4Q8TD43 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
TRPM4Q8TD43 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
TRPM4Q8TD43 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TRPM4Q8TD43 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TRPM4Q8TD43 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
TRPM4Q8TD43 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TRPM4Q8TD43 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.92■■■□□ 2.7
TRPM4Q8TD43 ABHD17AP5-201ENST00000580133 923 ntBASIC31.92■■■□□ 2.7
TRPM4Q8TD43 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TRPM4Q8TD43 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.92■■■□□ 2.7
TRPM4Q8TD43 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRPM4Q8TD43 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRPM4Q8TD43 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
TRPM4Q8TD43 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.9■■■□□ 2.7
TRPM4Q8TD43 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.88■■■□□ 2.69
TRPM4Q8TD43 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
TRPM4Q8TD43 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
TRPM4Q8TD43 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.88■■■□□ 2.69
TRPM4Q8TD43 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRPM4Q8TD43 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.86■■■□□ 2.69
TRPM4Q8TD43 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRPM4Q8TD43 GPX1-201ENST00000419349 1106 ntBASIC31.85■■■□□ 2.69
TRPM4Q8TD43 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.83■■■□□ 2.69
TRPM4Q8TD43 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TRPM4Q8TD43 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRPM4Q8TD43 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.8■■■□□ 2.68
TRPM4Q8TD43 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRPM4Q8TD43 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.79■■■□□ 2.68
TRPM4Q8TD43 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.79■■■□□ 2.68
TRPM4Q8TD43 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.79■■■□□ 2.68
TRPM4Q8TD43 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TRPM4Q8TD43 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
TRPM4Q8TD43 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TRPM4Q8TD43 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TRPM4Q8TD43 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TRPM4Q8TD43 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TRPM4Q8TD43 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.77■■■□□ 2.68
TRPM4Q8TD43 RNF126P1-201ENST00000567452 1320 ntBASIC31.75■■■□□ 2.67
TRPM4Q8TD43 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
TRPM4Q8TD43 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.75■■■□□ 2.67
TRPM4Q8TD43 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.75■■■□□ 2.67
TRPM4Q8TD43 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TRPM4Q8TD43 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
TRPM4Q8TD43 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.74■■■□□ 2.67
TRPM4Q8TD43 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
TRPM4Q8TD43 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.73■■■□□ 2.67
TRPM4Q8TD43 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
TRPM4Q8TD43 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
TRPM4Q8TD43 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.71■■■□□ 2.67
TRPM4Q8TD43 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
TRPM4Q8TD43 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TRPM4Q8TD43 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.69■■■□□ 2.66
TRPM4Q8TD43 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
TRPM4Q8TD43 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
TRPM4Q8TD43 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TRPM4Q8TD43 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TRPM4Q8TD43 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.66■■■□□ 2.66
TRPM4Q8TD43 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.64■■■□□ 2.66
TRPM4Q8TD43 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRPM4Q8TD43 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRPM4Q8TD43 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TRPM4Q8TD43 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRPM4Q8TD43 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRPM4Q8TD43 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
TRPM4Q8TD43 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
TRPM4Q8TD43 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.61■■■□□ 2.65
TRPM4Q8TD43 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TRPM4Q8TD43 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TRPM4Q8TD43 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRPM4Q8TD43 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRPM4Q8TD43 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRPM4Q8TD43 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms