Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SLC44A5Q8NCS7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.31■■■□□ 2.6
SLC44A5Q8NCS7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
SLC44A5Q8NCS7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SLC44A5Q8NCS7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC44A5Q8NCS7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC44A5Q8NCS7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SLC44A5Q8NCS7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SLC44A5Q8NCS7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC44A5Q8NCS7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC44A5Q8NCS7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.27■■■□□ 2.6
SLC44A5Q8NCS7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SLC44A5Q8NCS7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.24■■■□□ 2.59
SLC44A5Q8NCS7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
SLC44A5Q8NCS7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
SLC44A5Q8NCS7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.23■■■□□ 2.59
SLC44A5Q8NCS7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SLC44A5Q8NCS7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SLC44A5Q8NCS7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.22■■■□□ 2.59
SLC44A5Q8NCS7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
SLC44A5Q8NCS7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SLC44A5Q8NCS7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SLC44A5Q8NCS7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SLC44A5Q8NCS7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SLC44A5Q8NCS7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.19■■■□□ 2.58
SLC44A5Q8NCS7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SLC44A5Q8NCS7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
SLC44A5Q8NCS7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SLC44A5Q8NCS7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SLC44A5Q8NCS7 AC010864.1-201ENST00000609407 1511 ntBASIC31.17■■■□□ 2.58
SLC44A5Q8NCS7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SLC44A5Q8NCS7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
SLC44A5Q8NCS7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.14■■■□□ 2.58
SLC44A5Q8NCS7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SLC44A5Q8NCS7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.13■■■□□ 2.57
SLC44A5Q8NCS7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SLC44A5Q8NCS7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SLC44A5Q8NCS7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.12■■■□□ 2.57
SLC44A5Q8NCS7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SLC44A5Q8NCS7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC44A5Q8NCS7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SLC44A5Q8NCS7 HLA-V-202ENST00000446817 847 ntBASIC31.09■■■□□ 2.57
SLC44A5Q8NCS7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.08■■■□□ 2.57
SLC44A5Q8NCS7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLC44A5Q8NCS7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLC44A5Q8NCS7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC44A5Q8NCS7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.06■■■□□ 2.56
SLC44A5Q8NCS7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.05■■■□□ 2.56
SLC44A5Q8NCS7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC44A5Q8NCS7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.03■■■□□ 2.56
SLC44A5Q8NCS7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC44A5Q8NCS7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.02■■■□□ 2.56
SLC44A5Q8NCS7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.01■■■□□ 2.55
SLC44A5Q8NCS7 LINC01971-201ENST00000617888 1048 ntBASIC31.01■■■□□ 2.55
SLC44A5Q8NCS7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SLC44A5Q8NCS7 AL135925.1-201ENST00000605920 1701 ntBASIC31■■■□□ 2.55
SLC44A5Q8NCS7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SLC44A5Q8NCS7 DUX4L11-201ENST00000611504 1267 ntBASIC30.99■■■□□ 2.55
SLC44A5Q8NCS7 DUX4L12-201ENST00000614593 1267 ntBASIC30.99■■■□□ 2.55
SLC44A5Q8NCS7 DUX4L14-201ENST00000621227 1267 ntBASIC30.99■■■□□ 2.55
SLC44A5Q8NCS7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
SLC44A5Q8NCS7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.96■■■□□ 2.55
SLC44A5Q8NCS7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SLC44A5Q8NCS7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SLC44A5Q8NCS7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SLC44A5Q8NCS7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.94■■■□□ 2.54
SLC44A5Q8NCS7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.94■■■□□ 2.54
SLC44A5Q8NCS7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
SLC44A5Q8NCS7 CR559946.2-201ENST00000623684 991 ntBASIC30.93■■■□□ 2.54
SLC44A5Q8NCS7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 MIR3648-2-201ENST00000581792 180 ntBASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 MIR3648-1-201ENST00000615959 180 ntBASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 AC016575.1-201ENST00000607026 382 ntBASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SLC44A5Q8NCS7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.9■■■□□ 2.54
SLC44A5Q8NCS7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SLC44A5Q8NCS7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.89■■■□□ 2.54
SLC44A5Q8NCS7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.89■■■□□ 2.54
SLC44A5Q8NCS7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SLC44A5Q8NCS7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.88■■■□□ 2.53
SLC44A5Q8NCS7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
SLC44A5Q8NCS7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SLC44A5Q8NCS7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SLC44A5Q8NCS7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.86■■■□□ 2.53
SLC44A5Q8NCS7 AC127502.1-201ENST00000399971 1502 ntBASIC30.86■■■□□ 2.53
SLC44A5Q8NCS7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
SLC44A5Q8NCS7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms