Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH20Q8N6Y1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH20Q8N6Y1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH20Q8N6Y1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.82■■□□□ 1.88
PCDH20Q8N6Y1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH20Q8N6Y1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDH20Q8N6Y1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.81■■□□□ 1.88
PCDH20Q8N6Y1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH20Q8N6Y1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH20Q8N6Y1 MIR6090-201ENST00000622481 60 ntBASIC26.8■■□□□ 1.88
PCDH20Q8N6Y1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH20Q8N6Y1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH20Q8N6Y1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH20Q8N6Y1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDH20Q8N6Y1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDH20Q8N6Y1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDH20Q8N6Y1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDH20Q8N6Y1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.76■■□□□ 1.87
PCDH20Q8N6Y1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDH20Q8N6Y1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDH20Q8N6Y1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.75■■□□□ 1.87
PCDH20Q8N6Y1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDH20Q8N6Y1 ABHD17AP4-201ENST00000411545 909 ntBASIC26.72■■□□□ 1.87
PCDH20Q8N6Y1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDH20Q8N6Y1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
PCDH20Q8N6Y1 DUX4L29-201ENST00000425409 679 ntBASIC26.71■■□□□ 1.87
PCDH20Q8N6Y1 AC010864.1-201ENST00000609407 1511 ntBASIC26.7■■□□□ 1.87
PCDH20Q8N6Y1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH20Q8N6Y1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH20Q8N6Y1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
PCDH20Q8N6Y1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH20Q8N6Y1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH20Q8N6Y1 AC021231.2-201ENST00000594613 730 ntBASIC26.65■■□□□ 1.86
PCDH20Q8N6Y1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDH20Q8N6Y1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDH20Q8N6Y1 AL135925.1-201ENST00000605920 1701 ntBASIC26.64■■□□□ 1.85
PCDH20Q8N6Y1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH20Q8N6Y1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH20Q8N6Y1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH20Q8N6Y1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH20Q8N6Y1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH20Q8N6Y1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDH20Q8N6Y1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDH20Q8N6Y1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDH20Q8N6Y1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH20Q8N6Y1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH20Q8N6Y1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH20Q8N6Y1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH20Q8N6Y1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH20Q8N6Y1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PCDH20Q8N6Y1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH20Q8N6Y1 ZNRF2P2-203ENST00000454624 420 ntBASIC26.59■■□□□ 1.85
PCDH20Q8N6Y1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
PCDH20Q8N6Y1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.56■■□□□ 1.84
PCDH20Q8N6Y1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDH20Q8N6Y1 ABCB10P1-201ENST00000614297 2181 ntBASIC26.56■■□□□ 1.84
PCDH20Q8N6Y1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.55■■□□□ 1.84
PCDH20Q8N6Y1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
PCDH20Q8N6Y1 MIR7108-201ENST00000614319 87 ntBASIC26.54■■□□□ 1.84
PCDH20Q8N6Y1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDH20Q8N6Y1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.54■■□□□ 1.84
PCDH20Q8N6Y1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PCDH20Q8N6Y1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDH20Q8N6Y1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
PCDH20Q8N6Y1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.52■■□□□ 1.84
PCDH20Q8N6Y1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
PCDH20Q8N6Y1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PCDH20Q8N6Y1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.51■■□□□ 1.83
PCDH20Q8N6Y1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDH20Q8N6Y1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms