Protein–RNA interactions for Protein: Q8N5U1

MS4A15, Membrane-spanning 4-domains subfamily A member 15, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A15Q8N5U1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MS4A15Q8N5U1 DRD5P2-201ENST00000421395 2012 ntBASIC23.11■■□□□ 1.29
MS4A15Q8N5U1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MS4A15Q8N5U1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
MS4A15Q8N5U1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
MS4A15Q8N5U1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MS4A15Q8N5U1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MS4A15Q8N5U1 AL031258.1-201ENST00000623562 325 ntBASIC23.08■■□□□ 1.29
MS4A15Q8N5U1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
MS4A15Q8N5U1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
MS4A15Q8N5U1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MS4A15Q8N5U1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MS4A15Q8N5U1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MS4A15Q8N5U1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MS4A15Q8N5U1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.06■■□□□ 1.28
MS4A15Q8N5U1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.05■■□□□ 1.28
MS4A15Q8N5U1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MS4A15Q8N5U1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
MS4A15Q8N5U1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.05■■□□□ 1.28
MS4A15Q8N5U1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
MS4A15Q8N5U1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MS4A15Q8N5U1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MS4A15Q8N5U1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MS4A15Q8N5U1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
MS4A15Q8N5U1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MS4A15Q8N5U1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MS4A15Q8N5U1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MS4A15Q8N5U1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MS4A15Q8N5U1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
MS4A15Q8N5U1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.02■■□□□ 1.28
MS4A15Q8N5U1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.02■■□□□ 1.28
MS4A15Q8N5U1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
MS4A15Q8N5U1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MS4A15Q8N5U1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
MS4A15Q8N5U1 AL121749.1-202ENST00000609313 2153 ntBASIC23.01■■□□□ 1.27
MS4A15Q8N5U1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
MS4A15Q8N5U1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MS4A15Q8N5U1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MS4A15Q8N5U1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23■■□□□ 1.27
MS4A15Q8N5U1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23■■□□□ 1.27
MS4A15Q8N5U1 AC135731.1-201ENST00000569415 2548 ntBASIC23■■□□□ 1.27
MS4A15Q8N5U1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MS4A15Q8N5U1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MS4A15Q8N5U1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.98■■□□□ 1.27
MS4A15Q8N5U1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
MS4A15Q8N5U1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MS4A15Q8N5U1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MS4A15Q8N5U1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
MS4A15Q8N5U1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MS4A15Q8N5U1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MS4A15Q8N5U1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.95■■□□□ 1.26
MS4A15Q8N5U1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.95■■□□□ 1.26
MS4A15Q8N5U1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.94■■□□□ 1.26
MS4A15Q8N5U1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MS4A15Q8N5U1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MS4A15Q8N5U1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
MS4A15Q8N5U1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MS4A15Q8N5U1 WASH5P-204ENST00000632292 975 ntBASIC22.93■■□□□ 1.26
MS4A15Q8N5U1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.93■■□□□ 1.26
MS4A15Q8N5U1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
MS4A15Q8N5U1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
MS4A15Q8N5U1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MS4A15Q8N5U1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MS4A15Q8N5U1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MS4A15Q8N5U1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.91■■□□□ 1.26
MS4A15Q8N5U1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
MS4A15Q8N5U1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MS4A15Q8N5U1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MS4A15Q8N5U1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
MS4A15Q8N5U1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MS4A15Q8N5U1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
MS4A15Q8N5U1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.9■■□□□ 1.26
MS4A15Q8N5U1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.9■■□□□ 1.26
MS4A15Q8N5U1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MS4A15Q8N5U1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MS4A15Q8N5U1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MS4A15Q8N5U1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MS4A15Q8N5U1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MS4A15Q8N5U1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MS4A15Q8N5U1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MS4A15Q8N5U1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MS4A15Q8N5U1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.87■■□□□ 1.25
MS4A15Q8N5U1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.87■■□□□ 1.25
MS4A15Q8N5U1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.87■■□□□ 1.25
MS4A15Q8N5U1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
MS4A15Q8N5U1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MS4A15Q8N5U1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
MS4A15Q8N5U1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MS4A15Q8N5U1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
MS4A15Q8N5U1 AC010864.1-201ENST00000609407 1511 ntBASIC22.84■■□□□ 1.25
MS4A15Q8N5U1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.84■■□□□ 1.25
MS4A15Q8N5U1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
MS4A15Q8N5U1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.83■■□□□ 1.25
MS4A15Q8N5U1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
MS4A15Q8N5U1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
MS4A15Q8N5U1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
MS4A15Q8N5U1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
MS4A15Q8N5U1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
MS4A15Q8N5U1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
MS4A15Q8N5U1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms