Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SIX5Q8N196 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SIX5Q8N196 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SIX5Q8N196 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SIX5Q8N196 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SIX5Q8N196 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SIX5Q8N196 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.28■■□□□ 1.96
SIX5Q8N196 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SIX5Q8N196 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SIX5Q8N196 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.27■■□□□ 1.96
SIX5Q8N196 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.27■■□□□ 1.96
SIX5Q8N196 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
SIX5Q8N196 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SIX5Q8N196 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
SIX5Q8N196 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SIX5Q8N196 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.25■■□□□ 1.95
SIX5Q8N196 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SIX5Q8N196 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SIX5Q8N196 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
SIX5Q8N196 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.23■■□□□ 1.95
SIX5Q8N196 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SIX5Q8N196 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SIX5Q8N196 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SIX5Q8N196 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
SIX5Q8N196 GPX1-201ENST00000419349 1106 ntBASIC27.2■■□□□ 1.94
SIX5Q8N196 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.2■■□□□ 1.94
SIX5Q8N196 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.19■■□□□ 1.94
SIX5Q8N196 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.19■■□□□ 1.94
SIX5Q8N196 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SIX5Q8N196 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.19■■□□□ 1.94
SIX5Q8N196 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SIX5Q8N196 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SIX5Q8N196 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
SIX5Q8N196 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SIX5Q8N196 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SIX5Q8N196 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SIX5Q8N196 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SIX5Q8N196 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SIX5Q8N196 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SIX5Q8N196 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SIX5Q8N196 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
SIX5Q8N196 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SIX5Q8N196 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SIX5Q8N196 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.15■■□□□ 1.94
SIX5Q8N196 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
SIX5Q8N196 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SIX5Q8N196 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.14■■□□□ 1.94
SIX5Q8N196 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.94
SIX5Q8N196 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.13■■□□□ 1.93
SIX5Q8N196 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SIX5Q8N196 RNF126P1-201ENST00000567452 1320 ntBASIC27.13■■□□□ 1.93
SIX5Q8N196 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.12■■□□□ 1.93
SIX5Q8N196 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SIX5Q8N196 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.11■■□□□ 1.93
SIX5Q8N196 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.1■■□□□ 1.93
SIX5Q8N196 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SIX5Q8N196 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SIX5Q8N196 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SIX5Q8N196 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.08■■□□□ 1.93
SIX5Q8N196 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
SIX5Q8N196 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
SIX5Q8N196 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SIX5Q8N196 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.07■■□□□ 1.92
SIX5Q8N196 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.06■■□□□ 1.92
SIX5Q8N196 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.06■■□□□ 1.92
SIX5Q8N196 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.04■■□□□ 1.92
SIX5Q8N196 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
SIX5Q8N196 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
SIX5Q8N196 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
SIX5Q8N196 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
SIX5Q8N196 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.03■■□□□ 1.92
SIX5Q8N196 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SIX5Q8N196 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
SIX5Q8N196 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
SIX5Q8N196 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.01■■□□□ 1.91
SIX5Q8N196 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.01■■□□□ 1.91
SIX5Q8N196 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
SIX5Q8N196 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
SIX5Q8N196 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SIX5Q8N196 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SIX5Q8N196 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SIX5Q8N196 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SIX5Q8N196 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SIX5Q8N196 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.97■■□□□ 1.91
SIX5Q8N196 NTF6A-201ENST00000591175 560 ntBASIC26.97■■□□□ 1.91
SIX5Q8N196 AC012354.3-201ENST00000623734 483 ntBASIC26.97■■□□□ 1.91
SIX5Q8N196 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
SIX5Q8N196 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.95■■□□□ 1.91
SIX5Q8N196 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.95■■□□□ 1.9
SIX5Q8N196 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SIX5Q8N196 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.93■■□□□ 1.9
SIX5Q8N196 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.93■■□□□ 1.9
SIX5Q8N196 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SIX5Q8N196 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SIX5Q8N196 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SIX5Q8N196 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.91■■□□□ 1.9
SIX5Q8N196 AC022413.1-201ENST00000624602 984 ntBASIC26.91■■□□□ 1.9
SIX5Q8N196 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
SIX5Q8N196 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
SIX5Q8N196 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms