Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS13BQ7Z7G8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS13BQ7Z7G8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS13BQ7Z7G8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS13BQ7Z7G8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.6■□□□□ 0.25
VPS13BQ7Z7G8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.6■□□□□ 0.25
VPS13BQ7Z7G8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS13BQ7Z7G8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13BQ7Z7G8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS13BQ7Z7G8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13BQ7Z7G8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS13BQ7Z7G8 RNF126P1-201ENST00000567452 1320 ntBASIC16.57■□□□□ 0.24
VPS13BQ7Z7G8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
VPS13BQ7Z7G8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS13BQ7Z7G8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13BQ7Z7G8 ABHD17AP5-201ENST00000580133 923 ntBASIC16.56■□□□□ 0.24
VPS13BQ7Z7G8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13BQ7Z7G8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13BQ7Z7G8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13BQ7Z7G8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS13BQ7Z7G8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
VPS13BQ7Z7G8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS13BQ7Z7G8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS13BQ7Z7G8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VPS13BQ7Z7G8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS13BQ7Z7G8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.54■□□□□ 0.24
VPS13BQ7Z7G8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS13BQ7Z7G8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS13BQ7Z7G8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS13BQ7Z7G8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS13BQ7Z7G8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS13BQ7Z7G8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS13BQ7Z7G8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS13BQ7Z7G8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS13BQ7Z7G8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS13BQ7Z7G8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS13BQ7Z7G8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
VPS13BQ7Z7G8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS13BQ7Z7G8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS13BQ7Z7G8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS13BQ7Z7G8 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS13BQ7Z7G8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS13BQ7Z7G8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS13BQ7Z7G8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VPS13BQ7Z7G8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS13BQ7Z7G8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.49■□□□□ 0.23
VPS13BQ7Z7G8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS13BQ7Z7G8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VPS13BQ7Z7G8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS13BQ7Z7G8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS13BQ7Z7G8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS13BQ7Z7G8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS13BQ7Z7G8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS13BQ7Z7G8 GPX1-201ENST00000419349 1106 ntBASIC16.46■□□□□ 0.22
VPS13BQ7Z7G8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC16.46■□□□□ 0.22
VPS13BQ7Z7G8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS13BQ7Z7G8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
VPS13BQ7Z7G8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS13BQ7Z7G8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS13BQ7Z7G8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS13BQ7Z7G8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS13BQ7Z7G8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS13BQ7Z7G8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS13BQ7Z7G8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VPS13BQ7Z7G8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VPS13BQ7Z7G8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS13BQ7Z7G8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS13BQ7Z7G8 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS13BQ7Z7G8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13BQ7Z7G8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13BQ7Z7G8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13BQ7Z7G8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS13BQ7Z7G8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.41■□□□□ 0.22
VPS13BQ7Z7G8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VPS13BQ7Z7G8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
VPS13BQ7Z7G8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS13BQ7Z7G8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
VPS13BQ7Z7G8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VPS13BQ7Z7G8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13BQ7Z7G8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS13BQ7Z7G8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.39■□□□□ 0.21
VPS13BQ7Z7G8 NTF6A-201ENST00000591175 560 ntBASIC16.39■□□□□ 0.21
VPS13BQ7Z7G8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VPS13BQ7Z7G8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13BQ7Z7G8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
VPS13BQ7Z7G8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13BQ7Z7G8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS13BQ7Z7G8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS13BQ7Z7G8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms