Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 WASH5P-204ENST00000632292 975 ntBASIC22.66■■□□□ 1.22
SEC61A1P61619 RPS2P35-201ENST00000443417 897 ntBASIC22.65■■□□□ 1.22
SEC61A1P61619 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
SEC61A1P61619 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SEC61A1P61619 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SEC61A1P61619 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.63■■□□□ 1.21
SEC61A1P61619 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A1P61619 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.63■■□□□ 1.21
SEC61A1P61619 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A1P61619 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A1P61619 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A1P61619 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.62■■□□□ 1.21
SEC61A1P61619 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.61■■□□□ 1.21
SEC61A1P61619 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.61■■□□□ 1.21
SEC61A1P61619 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.61■■□□□ 1.21
SEC61A1P61619 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SEC61A1P61619 AC135731.1-201ENST00000569415 2548 ntBASIC22.61■■□□□ 1.21
SEC61A1P61619 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.61■■□□□ 1.21
SEC61A1P61619 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SEC61A1P61619 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.6■■□□□ 1.21
SEC61A1P61619 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SEC61A1P61619 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.6■■□□□ 1.21
SEC61A1P61619 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SEC61A1P61619 AL162393.1-201ENST00000437852 946 ntBASIC22.59■■□□□ 1.21
SEC61A1P61619 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SEC61A1P61619 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SEC61A1P61619 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SEC61A1P61619 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
SEC61A1P61619 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.57■■□□□ 1.2
SEC61A1P61619 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.56■■□□□ 1.2
SEC61A1P61619 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.56■■□□□ 1.2
SEC61A1P61619 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SEC61A1P61619 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SEC61A1P61619 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SEC61A1P61619 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SEC61A1P61619 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SEC61A1P61619 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SEC61A1P61619 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEC61A1P61619 MIR762-201ENST00000390236 83 ntBASIC22.53■■□□□ 1.2
SEC61A1P61619 AP006261.1-201ENST00000584783 668 ntBASIC22.53■■□□□ 1.2
SEC61A1P61619 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SEC61A1P61619 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SEC61A1P61619 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SEC61A1P61619 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SEC61A1P61619 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SEC61A1P61619 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
SEC61A1P61619 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.51■■□□□ 1.19
SEC61A1P61619 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEC61A1P61619 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEC61A1P61619 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SEC61A1P61619 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.5■■□□□ 1.19
SEC61A1P61619 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SEC61A1P61619 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SEC61A1P61619 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
SEC61A1P61619 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.49■■□□□ 1.19
SEC61A1P61619 AC142086.6-201ENST00000621154 1765 ntBASIC22.49■■□□□ 1.19
SEC61A1P61619 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.49■■□□□ 1.19
SEC61A1P61619 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.49■■□□□ 1.19
SEC61A1P61619 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SEC61A1P61619 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.48■■□□□ 1.19
SEC61A1P61619 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SEC61A1P61619 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.48■■□□□ 1.19
SEC61A1P61619 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SEC61A1P61619 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.47■■□□□ 1.19
SEC61A1P61619 DUX4L28-201ENST00000623687 678 ntBASIC22.47■■□□□ 1.19
SEC61A1P61619 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SEC61A1P61619 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SEC61A1P61619 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SEC61A1P61619 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SEC61A1P61619 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SEC61A1P61619 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SEC61A1P61619 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SEC61A1P61619 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.45■■□□□ 1.18
SEC61A1P61619 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SEC61A1P61619 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SEC61A1P61619 MIR3665-201ENST00000578708 105 ntBASIC22.44■■□□□ 1.18
SEC61A1P61619 AC005559.1-201ENST00000589661 871 ntBASIC22.44■■□□□ 1.18
SEC61A1P61619 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.43■■□□□ 1.18
SEC61A1P61619 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SEC61A1P61619 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SEC61A1P61619 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SEC61A1P61619 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
SEC61A1P61619 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SEC61A1P61619 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
SEC61A1P61619 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SEC61A1P61619 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SEC61A1P61619 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SEC61A1P61619 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SEC61A1P61619 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SEC61A1P61619 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SEC61A1P61619 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SEC61A1P61619 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SEC61A1P61619 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.39■■□□□ 1.18
SEC61A1P61619 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SEC61A1P61619 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SEC61A1P61619 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms