Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
VEGFBP49765 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
VEGFBP49765 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
VEGFBP49765 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
VEGFBP49765 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
VEGFBP49765 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.63■■■□□ 2.65
VEGFBP49765 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.63■■■□□ 2.65
VEGFBP49765 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
VEGFBP49765 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.62■■■□□ 2.65
VEGFBP49765 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.61■■■□□ 2.65
VEGFBP49765 AL033527.3-201ENST00000566366 1196 ntBASIC31.6■■■□□ 2.65
VEGFBP49765 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
VEGFBP49765 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.58■■■□□ 2.65
VEGFBP49765 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.57■■■□□ 2.64
VEGFBP49765 AC008813.1-201ENST00000536597 885 ntBASIC31.57■■■□□ 2.64
VEGFBP49765 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
VEGFBP49765 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
VEGFBP49765 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
VEGFBP49765 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
VEGFBP49765 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
VEGFBP49765 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.55■■■□□ 2.64
VEGFBP49765 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
VEGFBP49765 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VEGFBP49765 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.52■■■□□ 2.64
VEGFBP49765 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
VEGFBP49765 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
VEGFBP49765 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
VEGFBP49765 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
VEGFBP49765 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.5■■■□□ 2.63
VEGFBP49765 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
VEGFBP49765 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
VEGFBP49765 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
VEGFBP49765 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
VEGFBP49765 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
VEGFBP49765 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
VEGFBP49765 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
VEGFBP49765 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
VEGFBP49765 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
VEGFBP49765 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
VEGFBP49765 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
VEGFBP49765 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
VEGFBP49765 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.42■■■□□ 2.62
VEGFBP49765 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
VEGFBP49765 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
VEGFBP49765 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
VEGFBP49765 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.37■■■□□ 2.61
VEGFBP49765 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
VEGFBP49765 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
VEGFBP49765 AC019069.1-201ENST00000610008 1333 ntBASIC31.36■■■□□ 2.61
VEGFBP49765 AC022413.1-201ENST00000624602 984 ntBASIC31.36■■■□□ 2.61
VEGFBP49765 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
VEGFBP49765 RARRES2P1-201ENST00000474487 481 ntBASIC31.33■■■□□ 2.61
VEGFBP49765 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.33■■■□□ 2.61
VEGFBP49765 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.32■■■□□ 2.6
VEGFBP49765 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.32■■■□□ 2.6
VEGFBP49765 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
VEGFBP49765 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
VEGFBP49765 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.29■■■□□ 2.6
VEGFBP49765 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.29■■■□□ 2.6
VEGFBP49765 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
VEGFBP49765 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
VEGFBP49765 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
VEGFBP49765 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.26■■■□□ 2.59
VEGFBP49765 U85056.1-201ENST00000616429 682 ntBASIC31.26■■■□□ 2.59
VEGFBP49765 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
VEGFBP49765 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.25■■■□□ 2.59
VEGFBP49765 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
VEGFBP49765 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
VEGFBP49765 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.25■■■□□ 2.59
VEGFBP49765 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
VEGFBP49765 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.24■■■□□ 2.59
VEGFBP49765 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
VEGFBP49765 AL592295.1-201ENST00000400984 884 ntBASIC31.23■■■□□ 2.59
VEGFBP49765 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.23■■■□□ 2.59
VEGFBP49765 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.22■■■□□ 2.59
VEGFBP49765 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.21■■■□□ 2.59
VEGFBP49765 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.21■■■□□ 2.59
VEGFBP49765 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.21■■■□□ 2.59
VEGFBP49765 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
VEGFBP49765 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
VEGFBP49765 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.2■■■□□ 2.58
VEGFBP49765 TSPY13P-201ENST00000338964 914 ntBASIC31.19■■■□□ 2.58
VEGFBP49765 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
VEGFBP49765 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.19■■■□□ 2.58
VEGFBP49765 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
VEGFBP49765 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
VEGFBP49765 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
VEGFBP49765 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
VEGFBP49765 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
VEGFBP49765 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
VEGFBP49765 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.14■■■□□ 2.58
VEGFBP49765 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
VEGFBP49765 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.12■■■□□ 2.57
VEGFBP49765 AC004987.1-201ENST00000428627 508 ntBASIC31.12■■■□□ 2.57
VEGFBP49765 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
VEGFBP49765 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
VEGFBP49765 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
VEGFBP49765 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
VEGFBP49765 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.09■■■□□ 2.57
VEGFBP49765 ATP5G2P3-201ENST00000429083 425 ntBASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms