Protein–RNA interactions for Protein: P05455

SSB, Lupus La protein, humanhuman

Known RBP eCLIP

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP05455 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.02□□□□□ -1.454e-19■■□□□ 12
SSBP05455 SNORD61-201ENST00000384252 73 ntBASIC2.43□□□□□ -2.024e-19■■□□□ 12
SSBP05455 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.87■■□□□ 1.259e-13■■□□□ 11.9
SSBP05455 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.45■□□□□ 0.869e-13■■□□□ 11.9
SSBP05455 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.679e-13■■□□□ 11.9
SSBP05455 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)14.41□□□□□ -0.19e-13■■□□□ 11.9
SSBP05455 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)11.14□□□□□ -0.639e-13■■□□□ 11.9
SSBP05455 RPS3-211ENST00000528847 639 ntTSL 511.46□□□□□ -0.575e-28■■□□□ 11.7
SSBP05455 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.348e-6■■□□□ 11.6
SSBP05455 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.348e-6■■□□□ 11.6
SSBP05455 ZFAS1-207ENST00000458653 596 ntTSL 231.37■■■□□ 2.612e-18■□□□□ 11.2
SSBP05455 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)27.76■■■□□ 2.032e-18■□□□□ 11.2
SSBP05455 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)26.88■■□□□ 1.892e-18■□□□□ 11.2
SSBP05455 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)24.06■■□□□ 1.442e-18■□□□□ 11.2
SSBP05455 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.06■■□□□ 1.442e-18■□□□□ 11.2
SSBP05455 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC11.06□□□□□ -0.642e-18■□□□□ 11.2
SSBP05455 ZFAS1-209ENST00000620594 508 ntTSL 38.58□□□□□ -1.042e-18■□□□□ 11.2
SSBP05455 ZFAS1-204ENST00000428008 566 ntTSL 28.23□□□□□ -1.092e-18■□□□□ 11.2
SSBP05455 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)8.21□□□□□ -1.12e-18■□□□□ 11.2
SSBP05455 SNORD12-201ENST00000391002 90 ntBASIC1.66□□□□□ -2.142e-18■□□□□ 11.2
SSBP05455 SNORD13-201ENST00000459299 104 ntBASIC2.01□□□□□ -2.094e-32■□□□□ 11.1
SSBP05455 RPS3-213ENST00000529285 550 ntTSL 522.83■■□□□ 1.253e-9■□□□□ 11.1
SSBP05455 RPS3-220ENST00000534555 387 ntTSL 317.89■□□□□ 0.453e-9■□□□□ 11.1
SSBP05455 RPS3-206ENST00000526248 771 ntTSL 517.53■□□□□ 0.43e-9■□□□□ 11.1
SSBP05455 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.37■□□□□ 0.213e-9■□□□□ 11.1
SSBP05455 RPS3-212ENST00000529173 1373 ntTSL 514.74□□□□□ -0.053e-9■□□□□ 11.1
SSBP05455 RPS3-216ENST00000530721 796 ntTSL 314.19□□□□□ -0.143e-9■□□□□ 11.1
SSBP05455 RPS3-218ENST00000532872 737 ntTSL 314.19□□□□□ -0.143e-9■□□□□ 11.1
SSBP05455 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.143e-9■□□□□ 11.1
SSBP05455 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.233e-9■□□□□ 11.1
SSBP05455 RPS3-208ENST00000527273 390 ntTSL 312.89□□□□□ -0.353e-9■□□□□ 11.1
SSBP05455 RPS3-202ENST00000422465 903 ntTSL 211.47□□□□□ -0.573e-9■□□□□ 11.1
SSBP05455 RPS3-210ENST00000528439 473 ntTSL 311.21□□□□□ -0.613e-9■□□□□ 11.1
SSBP05455 RPS3-219ENST00000534440 564 ntTSL 2 BASIC11.21□□□□□ -0.613e-9■□□□□ 11.1
SSBP05455 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.693e-9■□□□□ 11.1
SSBP05455 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC10.21□□□□□ -0.773e-9■□□□□ 11.1
SSBP05455 RPS3-207ENST00000526608 710 ntTSL 5 BASIC10.11□□□□□ -0.793e-9■□□□□ 11.1
SSBP05455 SNORD15A-201ENST00000384214 148 ntBASIC8.3□□□□□ -1.083e-9■□□□□ 11.1
SSBP05455 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.183e-23■□□□□ 10.9
SSBP05455 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.123e-23■□□□□ 10.9
SSBP05455 SYCP2L-202ENST00000341041 3069 ntTSL 213.37□□□□□ -0.273e-23■□□□□ 10.9
SSBP05455 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.63■■□□□ 1.054e-6■□□□□ 10.9
SSBP05455 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.46■□□□□ 0.554e-6■□□□□ 10.9
SSBP05455 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.534e-6■□□□□ 10.9
SSBP05455 PMF1-206ENST00000606952 1275 ntTSL 1 (best)18.34■□□□□ 0.534e-6■□□□□ 10.9
SSBP05455 SOS1-204ENST00000451331 579 ntTSL 418.13■□□□□ 0.494e-6■□□□□ 10.9
SSBP05455 PMF1-205ENST00000497069 837 ntTSL 317.65■□□□□ 0.424e-6■□□□□ 10.9
SSBP05455 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.014e-6■□□□□ 10.9
SSBP05455 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.64□□□□□ -0.074e-6■□□□□ 10.9
SSBP05455 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC14.18□□□□□ -0.144e-6■□□□□ 10.9
SSBP05455 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC13.51□□□□□ -0.254e-6■□□□□ 10.9
SSBP05455 PMF1-204ENST00000466489 933 ntTSL 1 (best)10.98□□□□□ -0.654e-6■□□□□ 10.9
SSBP05455 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.34e-6■□□□□ 10.9
SSBP05455 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.64e-6■□□□□ 10.9
SSBP05455 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.634e-6■□□□□ 10.9
SSBP05455 RPS8-207ENST00000485390 1115 ntTSL 1 (best)23.46■■□□□ 1.359e-14■□□□□ 10.8
SSBP05455 RPS8-204ENST00000470475 981 ntTSL 216.48■□□□□ 0.239e-14■□□□□ 10.8
SSBP05455 RPS8-208ENST00000497035 694 ntTSL 316.46■□□□□ 0.239e-14■□□□□ 10.8
SSBP05455 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.379e-14■□□□□ 10.8
SSBP05455 RPS8-201ENST00000372209 685 ntTSL 2 BASIC11.73□□□□□ -0.539e-14■□□□□ 10.8
SSBP05455 SNORD46-201ENST00000364043 104 ntBASIC8.53□□□□□ -1.049e-14■□□□□ 10.8
SSBP05455 PLXDC1-215ENST00000579190 565 ntTSL 418.33■□□□□ 0.521e-7■□□□□ 10.8
SSBP05455 SNRPB-203ENST00000474384 985 ntTSL 520.17■□□□□ 0.822e-7■□□□□ 10.7
SSBP05455 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.472e-7■□□□□ 10.7
SSBP05455 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.472e-7■□□□□ 10.7
SSBP05455 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC13.67□□□□□ -0.227e-10■□□□□ 10.5
SSBP05455 SEC31A-218ENST00000506495 541 ntTSL 411.03□□□□□ -0.647e-10■□□□□ 10.5
SSBP05455 THAP9-AS1-208ENST00000508772 566 ntTSL 411.03□□□□□ -0.647e-10■□□□□ 10.5
SSBP05455 SEC31A-220ENST00000507051 458 ntTSL 410.42□□□□□ -0.747e-10■□□□□ 10.5
SSBP05455 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC10.31□□□□□ -0.767e-10■□□□□ 10.5
SSBP05455 THAP9-AS1-210ENST00000511271 516 ntTSL 29.49□□□□□ -0.897e-10■□□□□ 10.5
SSBP05455 SEC31A-222ENST00000507676 551 ntTSL 48.3□□□□□ -1.087e-10■□□□□ 10.5
SSBP05455 THAP9-AS1-211ENST00000512932 971 ntTSL 28.26□□□□□ -1.097e-10■□□□□ 10.5
SSBP05455 SEC31A-211ENST00000503210 553 ntTSL 47.91□□□□□ -1.147e-10■□□□□ 10.5
SSBP05455 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.39□□□□□ -1.397e-10■□□□□ 10.5
SSBP05455 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.16■■□□□ 1.784e-9■□□□□ 10.5
SSBP05455 MORF4L1-218ENST00000559697 551 ntTSL 56.69□□□□□ -1.344e-9■□□□□ 10.5
SSBP05455 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.132e-8■□□□□ 10.2
SSBP05455 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.092e-8■□□□□ 10.2
SSBP05455 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.241e-5■□□□□ 10.2
SSBP05455 SORL1-206ENST00000527934 3032 ntTSL 2 BASIC12.31□□□□□ -0.441e-5■□□□□ 10.2
SSBP05455 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC10.12□□□□□ -0.791e-5■□□□□ 10.2
SSBP05455 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC9.78□□□□□ -0.841e-5■□□□□ 10.2
SSBP05455 SORL1-213ENST00000534754 2222 ntTSL 39.71□□□□□ -0.861e-5■□□□□ 10.2
SSBP05455 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC9.23□□□□□ -0.931e-5■□□□□ 10.2
SSBP05455 SORL1-202ENST00000524633 1338 ntTSL 59.05□□□□□ -0.961e-5■□□□□ 10.2
SSBP05455 SORL1-207ENST00000528339 3703 ntTSL 28.47□□□□□ -1.051e-5■□□□□ 10.2
SSBP05455 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.723e-55■□□□□ 10.1
SSBP05455 RPS12-202ENST00000484616 639 ntTSL 24.24□□□□□ -1.733e-55■□□□□ 10.1
SSBP05455 SNORD100-201ENST00000408573 76 ntBASIC1.23□□□□□ -2.213e-55■□□□□ 10.1
SSBP05455 RNA5SP242-201ENST00000364171 118 ntBASIC6.56□□□□□ -1.361e-17■□□□□ 10
SSBP05455 SCARNA9-201ENST00000530422 353 ntBASIC9.93□□□□□ -0.821e-10■□□□□ 9.7
SSBP05455 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.461e-10■□□□□ 9.7
SSBP05455 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.671e-10■□□□□ 9.7
SSBP05455 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 44.63□□□□□ -1.671e-10■□□□□ 9.7
SSBP05455 snoU2_19.4-201ENST00000364329 80 ntBASIC2.83□□□□□ -1.961e-10■□□□□ 9.7
SSBP05455 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.754e-11■□□□□ 9.7
SSBP05455 GMPR-203ENST00000543191 675 ntTSL 211.39□□□□□ -0.594e-11■□□□□ 9.7
SSBP05455 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.736e-10■□□□□ 9.6
SSBP05455 SLC38A2-208ENST00000549258 4384 ntTSL 24.42□□□□□ -1.76e-10■□□□□ 9.6
Retrieved 100 of 672 protein–RNA pairs in 165.3 ms