RNA–Protein interactions for RNA: ENST00000526608.5

RPS3-207, Transcript of ribosomal protein S3, humanhuman

TSL 5 BASIC

Gene RPS3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-207ENST00000526608 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
RPS3-207ENST00000526608 ABCC9O60706 1549 aa20.91■□□□□ 0.94
RPS3-207ENST00000526608 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
RPS3-207ENST00000526608 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
RPS3-207ENST00000526608 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
RPS3-207ENST00000526608 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
RPS3-207ENST00000526608 NACADO15069 1562 aa19.62■□□□□ 0.73
RPS3-207ENST00000526608 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
RPS3-207ENST00000526608 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
RPS3-207ENST00000526608 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
RPS3-207ENST00000526608 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
RPS3-207ENST00000526608 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
RPS3-207ENST00000526608 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.65
RPS3-207ENST00000526608 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
RPS3-207ENST00000526608 CECR2Q9BXF3 1484 aa19■□□□□ 0.63
RPS3-207ENST00000526608 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
RPS3-207ENST00000526608 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
RPS3-207ENST00000526608 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
RPS3-207ENST00000526608 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
RPS3-207ENST00000526608 CUX2O14529 1486 aa18.59■□□□□ 0.57
RPS3-207ENST00000526608 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
RPS3-207ENST00000526608 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
RPS3-207ENST00000526608 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
RPS3-207ENST00000526608 ATAD2BQ9ULI0 1458 aa18.08■□□□□ 0.49
RPS3-207ENST00000526608 SMARCA4P51532 1647 aa18.07■□□□□ 0.48
RPS3-207ENST00000526608 HMGXB3Q12766 1538 aa18■□□□□ 0.47
RPS3-207ENST00000526608 SMARCA2P51531 1590 aa17.97■□□□□ 0.47
RPS3-207ENST00000526608 NESP48681 1621 aa17.96■□□□□ 0.47
RPS3-207ENST00000526608 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
RPS3-207ENST00000526608 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
RPS3-207ENST00000526608 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
RPS3-207ENST00000526608 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
RPS3-207ENST00000526608 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
RPS3-207ENST00000526608 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.43
RPS3-207ENST00000526608 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
RPS3-207ENST00000526608 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
RPS3-207ENST00000526608 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
RPS3-207ENST00000526608 WIZO95785 1651 aa17.64■□□□□ 0.42
RPS3-207ENST00000526608 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
RPS3-207ENST00000526608 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
RPS3-207ENST00000526608 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
RPS3-207ENST00000526608 WDR62O43379 1518 aa17.49■□□□□ 0.39
RPS3-207ENST00000526608 MRC2Q9UBG0 1479 aa17.49■□□□□ 0.39
RPS3-207ENST00000526608 RIMBP3CA6NJZ7 1639 aa17.41■□□□□ 0.38
RPS3-207ENST00000526608 RIMBP3BA6NNM3 1639 aa17.41■□□□□ 0.38
RPS3-207ENST00000526608 RIMBP3Q9UFD9 1639 aa17.41■□□□□ 0.38
RPS3-207ENST00000526608 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
RPS3-207ENST00000526608 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
RPS3-207ENST00000526608 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
RPS3-207ENST00000526608 CFTRP13569 1480 aa17.36■□□□□ 0.37
RPS3-207ENST00000526608 TOP2AP11388 1531 aaKnown RBP17.35■□□□□ 0.37
RPS3-207ENST00000526608 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
RPS3-207ENST00000526608 URB2Q14146 1524 aaKnown RBP17.3■□□□□ 0.36
RPS3-207ENST00000526608 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
RPS3-207ENST00000526608 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
RPS3-207ENST00000526608 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
RPS3-207ENST00000526608 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
RPS3-207ENST00000526608 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
RPS3-207ENST00000526608 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
RPS3-207ENST00000526608 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
RPS3-207ENST00000526608 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
RPS3-207ENST00000526608 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
RPS3-207ENST00000526608 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
RPS3-207ENST00000526608 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
RPS3-207ENST00000526608 CHD1O14646 1710 aa16.95■□□□□ 0.3
RPS3-207ENST00000526608 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
RPS3-207ENST00000526608 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
RPS3-207ENST00000526608 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.292e-7■■■■□ 24
RPS3-207ENST00000526608 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
RPS3-207ENST00000526608 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
RPS3-207ENST00000526608 CUX1P39880 1505 aa16.76■□□□□ 0.27
RPS3-207ENST00000526608 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
RPS3-207ENST00000526608 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
RPS3-207ENST00000526608 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
RPS3-207ENST00000526608 SOGA1O94964 1423 aa16.73■□□□□ 0.27
RPS3-207ENST00000526608 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
RPS3-207ENST00000526608 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
RPS3-207ENST00000526608 FBLN2P98095 1184 aa16.68■□□□□ 0.26
RPS3-207ENST00000526608 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
RPS3-207ENST00000526608 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
RPS3-207ENST00000526608 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
RPS3-207ENST00000526608 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
RPS3-207ENST00000526608 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
RPS3-207ENST00000526608 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
RPS3-207ENST00000526608 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
RPS3-207ENST00000526608 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
RPS3-207ENST00000526608 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
RPS3-207ENST00000526608 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
RPS3-207ENST00000526608 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
RPS3-207ENST00000526608 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
RPS3-207ENST00000526608 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
RPS3-207ENST00000526608 TOP2BQ02880 1626 aa16.44■□□□□ 0.22
RPS3-207ENST00000526608 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
RPS3-207ENST00000526608 SUPT5HO00267 1087 aaKnown RBP16.43■□□□□ 0.22
RPS3-207ENST00000526608 KDM4FA0A1W2PPD8 638 aa16.4■□□□□ 0.22
RPS3-207ENST00000526608 NUP160Q12769 1436 aa16.39■□□□□ 0.21
RPS3-207ENST00000526608 SHROOM2Q13796 1616 aa16.39■□□□□ 0.21
RPS3-207ENST00000526608 KIF13AQ9H1H9 1805 aa16.39■□□□□ 0.21
RPS3-207ENST00000526608 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.218e-7■□□□□ 9.9
RPS3-207ENST00000526608 ERICH3Q5RHP9 1530 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms