RNA–Protein interactions for RNA: ENST00000532694.5

SORL1-211, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-211ENST00000532694 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
SORL1-211ENST00000532694 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
SORL1-211ENST00000532694 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
SORL1-211ENST00000532694 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
SORL1-211ENST00000532694 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
SORL1-211ENST00000532694 DCAF1Q9Y4B6 1507 aa15.66■□□□□ 0.1
SORL1-211ENST00000532694 DCAF8L2P0C7V8 631 aa15.65■□□□□ 0.1
SORL1-211ENST00000532694 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.07
SORL1-211ENST00000532694 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
SORL1-211ENST00000532694 ABCC9O60706 1549 aa15.24■□□□□ 0.03
SORL1-211ENST00000532694 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
SORL1-211ENST00000532694 HRCP23327 699 aa15.12■□□□□ 0.01
SORL1-211ENST00000532694 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
SORL1-211ENST00000532694 PCGF6Q9BYE7 350 aa15.05■□□□□ -0
SORL1-211ENST00000532694 LOC105371045A0A1W2PR82 267 aa15.03■□□□□ -0
SORL1-211ENST00000532694 NACADO15069 1562 aa14.95□□□□□ -0.02
SORL1-211ENST00000532694 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
SORL1-211ENST00000532694 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
SORL1-211ENST00000532694 TRIM41Q8WV44 630 aa14.81□□□□□ -0.04
SORL1-211ENST00000532694 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
SORL1-211ENST00000532694 TRIM26Q12899 539 aaPredicted RBP14.78□□□□□ -0.04
SORL1-211ENST00000532694 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
SORL1-211ENST00000532694 WIZO95785 1651 aa14.73□□□□□ -0.05
SORL1-211ENST00000532694 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
SORL1-211ENST00000532694 FAM9AQ8IZU1 332 aaPredicted RBP14.66□□□□□ -0.06
SORL1-211ENST00000532694 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
SORL1-211ENST00000532694 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
SORL1-211ENST00000532694 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
SORL1-211ENST00000532694 SMARCA4P51532 1647 aa14.5□□□□□ -0.09
SORL1-211ENST00000532694 EHMT2Q96KQ7 1210 aa14.5□□□□□ -0.09
SORL1-211ENST00000532694 ZEB1P37275 1124 aaPredicted RBP14.48□□□□□ -0.09
SORL1-211ENST00000532694 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
SORL1-211ENST00000532694 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
SORL1-211ENST00000532694 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
SORL1-211ENST00000532694 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
SORL1-211ENST00000532694 SOGA1O94964 1423 aa14.27□□□□□ -0.13
SORL1-211ENST00000532694 WRNQ14191 1432 aaPredicted RBP eCLIP14.26□□□□□ -0.13
SORL1-211ENST00000532694 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
SORL1-211ENST00000532694 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
SORL1-211ENST00000532694 EEA1Q15075 1411 aa14.23□□□□□ -0.13
SORL1-211ENST00000532694 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.131e-7■□□□□ 8.9
SORL1-211ENST00000532694 TNIKQ9UKE5 1360 aa14.21□□□□□ -0.13
SORL1-211ENST00000532694 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
SORL1-211ENST00000532694 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
SORL1-211ENST00000532694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
SORL1-211ENST00000532694 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
SORL1-211ENST00000532694 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
SORL1-211ENST00000532694 ATAD2BQ9ULI0 1458 aa14.1□□□□□ -0.15
SORL1-211ENST00000532694 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
SORL1-211ENST00000532694 UBTFP17480 764 aaKnown RBP14.09□□□□□ -0.15
SORL1-211ENST00000532694 TTBK1Q5TCY1 1321 aaPredicted RBP14.05□□□□□ -0.16
SORL1-211ENST00000532694 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
SORL1-211ENST00000532694 KIF21BO75037 1637 aa14.05□□□□□ -0.16
SORL1-211ENST00000532694 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
SORL1-211ENST00000532694 CLIP1P30622 1438 aa13.95□□□□□ -0.18
SORL1-211ENST00000532694 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
SORL1-211ENST00000532694 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
SORL1-211ENST00000532694 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
SORL1-211ENST00000532694 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
SORL1-211ENST00000532694 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
SORL1-211ENST00000532694 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
SORL1-211ENST00000532694 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
SORL1-211ENST00000532694 PELP1Q8IZL8 1130 aaKnown RBP13.84□□□□□ -0.19
SORL1-211ENST00000532694 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
SORL1-211ENST00000532694 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
SORL1-211ENST00000532694 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
SORL1-211ENST00000532694 ACIN1Q9UKV3 1341 aaKnown RBP13.8□□□□□ -0.2
SORL1-211ENST00000532694 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
SORL1-211ENST00000532694 MYT1Q01538 1121 aa13.79□□□□□ -0.2
SORL1-211ENST00000532694 CUX1P39880 1505 aa13.78□□□□□ -0.2
SORL1-211ENST00000532694 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
SORL1-211ENST00000532694 APLP2Q06481 763 aa13.78□□□□□ -0.2
SORL1-211ENST00000532694 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
SORL1-211ENST00000532694 RANGAP1P46060 587 aaPredicted RBP13.76□□□□□ -0.21
SORL1-211ENST00000532694 SLC24A1O60721 1099 aa13.75□□□□□ -0.21
SORL1-211ENST00000532694 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
SORL1-211ENST00000532694 CFTRP13569 1480 aa13.74□□□□□ -0.21
SORL1-211ENST00000532694 KIF27Q86VH2 1401 aa13.71□□□□□ -0.22
SORL1-211ENST00000532694 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
SORL1-211ENST00000532694 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
SORL1-211ENST00000532694 KANK4Q5T7N3 995 aaPredicted RBP13.64□□□□□ -0.23
SORL1-211ENST00000532694 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
SORL1-211ENST00000532694 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
SORL1-211ENST00000532694 RRBP1Q9P2E9 1410 aaKnown RBP13.61□□□□□ -0.23
SORL1-211ENST00000532694 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
SORL1-211ENST00000532694 DHX57Q6P158 1386 aaKnown RBP13.6□□□□□ -0.23
SORL1-211ENST00000532694 MIER1Q8N108 512 aa13.58□□□□□ -0.24
SORL1-211ENST00000532694 IGF1RP08069 1367 aa13.56□□□□□ -0.24
SORL1-211ENST00000532694 CUX2O14529 1486 aa13.56□□□□□ -0.24
SORL1-211ENST00000532694 CADPSQ9ULU8 1353 aa13.55□□□□□ -0.24
SORL1-211ENST00000532694 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
SORL1-211ENST00000532694 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
SORL1-211ENST00000532694 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
SORL1-211ENST00000532694 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
SORL1-211ENST00000532694 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
SORL1-211ENST00000532694 TIAM1Q13009 1591 aa13.48□□□□□ -0.25
SORL1-211ENST00000532694 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
SORL1-211ENST00000532694 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
SORL1-211ENST00000532694 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
SORL1-211ENST00000532694 ITGAEP38570 1179 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms