RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
SORL1-207ENST00000528339 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
SORL1-207ENST00000528339 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
SORL1-207ENST00000528339 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
SORL1-207ENST00000528339 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
SORL1-207ENST00000528339 NACADO15069 1562 aa16.21■□□□□ 0.19
SORL1-207ENST00000528339 UNC13AQ9UPW8 1703 aa16.15■□□□□ 0.18
SORL1-207ENST00000528339 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
SORL1-207ENST00000528339 ABCC9O60706 1549 aa15.98■□□□□ 0.15
SORL1-207ENST00000528339 BICRAQ9NZM4 1560 aa15.8■□□□□ 0.12
SORL1-207ENST00000528339 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
SORL1-207ENST00000528339 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
SORL1-207ENST00000528339 PEG3Q9GZU2 1588 aa15.38■□□□□ 0.05
SORL1-207ENST00000528339 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
SORL1-207ENST00000528339 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
SORL1-207ENST00000528339 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
SORL1-207ENST00000528339 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
SORL1-207ENST00000528339 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
SORL1-207ENST00000528339 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
SORL1-207ENST00000528339 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
SORL1-207ENST00000528339 WIZO95785 1651 aa15□□□□□ -0.01
SORL1-207ENST00000528339 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
SORL1-207ENST00000528339 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
SORL1-207ENST00000528339 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
SORL1-207ENST00000528339 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
SORL1-207ENST00000528339 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
SORL1-207ENST00000528339 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
SORL1-207ENST00000528339 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
SORL1-207ENST00000528339 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
SORL1-207ENST00000528339 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
SORL1-207ENST00000528339 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
SORL1-207ENST00000528339 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
SORL1-207ENST00000528339 CFTRP13569 1480 aa14.46□□□□□ -0.1
SORL1-207ENST00000528339 BIVM-ERCC5R4GMW8 1640 aa14.44□□□□□ -0.1
SORL1-207ENST00000528339 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
SORL1-207ENST00000528339 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
SORL1-207ENST00000528339 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
SORL1-207ENST00000528339 THOC2Q8NI27 1593 aaKnown RBP14.31□□□□□ -0.12
SORL1-207ENST00000528339 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
SORL1-207ENST00000528339 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
SORL1-207ENST00000528339 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.13
SORL1-207ENST00000528339 WDR62O43379 1518 aa14.2□□□□□ -0.14
SORL1-207ENST00000528339 CUX1P39880 1505 aa14.17□□□□□ -0.14
SORL1-207ENST00000528339 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
SORL1-207ENST00000528339 NESP48681 1621 aa14.15□□□□□ -0.15
SORL1-207ENST00000528339 TARBP1Q13395 1621 aaKnown RBP14.13□□□□□ -0.15
SORL1-207ENST00000528339 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
SORL1-207ENST00000528339 URB2Q14146 1524 aaKnown RBP14.09□□□□□ -0.15
SORL1-207ENST00000528339 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
SORL1-207ENST00000528339 ABCA5Q8WWZ7 1642 aa14.07□□□□□ -0.16
SORL1-207ENST00000528339 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
SORL1-207ENST00000528339 TOPBP1Q92547 1522 aa14.02□□□□□ -0.17
SORL1-207ENST00000528339 CEP164Q9UPV0 1460 aa13.99□□□□□ -0.17
SORL1-207ENST00000528339 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
SORL1-207ENST00000528339 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
SORL1-207ENST00000528339 PBRM1Q86U86 1689 aa13.96□□□□□ -0.17
SORL1-207ENST00000528339 CUX2O14529 1486 aa13.95□□□□□ -0.18
SORL1-207ENST00000528339 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
SORL1-207ENST00000528339 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
SORL1-207ENST00000528339 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
SORL1-207ENST00000528339 KIF21BO75037 1637 aa13.88□□□□□ -0.19
SORL1-207ENST00000528339 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
SORL1-207ENST00000528339 CUL7Q14999 1698 aa13.85□□□□□ -0.19
SORL1-207ENST00000528339 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
SORL1-207ENST00000528339 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
SORL1-207ENST00000528339 CHIC1Q5VXU3 224 aa13.81□□□□□ -0.2
SORL1-207ENST00000528339 ADAMTS12P58397 1594 aa13.77□□□□□ -0.2
SORL1-207ENST00000528339 IFT140Q96RY7 1462 aa13.77□□□□□ -0.2
SORL1-207ENST00000528339 EEA1Q15075 1411 aa13.76□□□□□ -0.21
SORL1-207ENST00000528339 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
SORL1-207ENST00000528339 CTTNBP2Q8WZ74 1663 aa13.74□□□□□ -0.21
SORL1-207ENST00000528339 RUSC2Q8N2Y8 1516 aa13.7□□□□□ -0.22
SORL1-207ENST00000528339 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
SORL1-207ENST00000528339 SOGA1O94964 1423 aa13.66□□□□□ -0.22
SORL1-207ENST00000528339 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
SORL1-207ENST00000528339 CHD1O14646 1710 aa13.62□□□□□ -0.23
SORL1-207ENST00000528339 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
SORL1-207ENST00000528339 SAMD9Q5K651 1589 aa13.6□□□□□ -0.23
SORL1-207ENST00000528339 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
SORL1-207ENST00000528339 ERCC6Q03468 1493 aa13.59□□□□□ -0.23
SORL1-207ENST00000528339 IGF1RP08069 1367 aa13.57□□□□□ -0.24
SORL1-207ENST00000528339 CLASP1Q7Z460 1538 aa13.56□□□□□ -0.24
SORL1-207ENST00000528339 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
SORL1-207ENST00000528339 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
SORL1-207ENST00000528339 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
SORL1-207ENST00000528339 CEP170Q5SW79 1584 aa13.54□□□□□ -0.24
SORL1-207ENST00000528339 NUP160Q12769 1436 aa13.5□□□□□ -0.25
SORL1-207ENST00000528339 LRRIQ1Q96JM4 1722 aa13.49□□□□□ -0.25
SORL1-207ENST00000528339 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
SORL1-207ENST00000528339 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
SORL1-207ENST00000528339 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
SORL1-207ENST00000528339 UGGT2Q9NYU1 1516 aa13.46□□□□□ -0.25
SORL1-207ENST00000528339 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
SORL1-207ENST00000528339 GOLGA3Q08378 1498 aa13.44□□□□□ -0.26
SORL1-207ENST00000528339 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
SORL1-207ENST00000528339 AQRO60306 1485 aaKnown RBP eCLIP13.43□□□□□ -0.267e-21■■■■■ 30
SORL1-207ENST00000528339 EFCAB5A4FU69 1503 aa13.41□□□□□ -0.26
SORL1-207ENST00000528339 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
SORL1-207ENST00000528339 IQGAP2Q13576 1575 aa13.39□□□□□ -0.27
SORL1-207ENST00000528339 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms