Protein: P05455

SSB, Lupus La protein, humanhuman

Known RBP eCLIP

Length 408 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP05455 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.732e-8■□□□□ 9.6
SSBP05455 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.12■■□□□ 1.612e-8■□□□□ 9.6
SSBP05455 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)25.07■■□□□ 1.62e-8■□□□□ 9.6
SSBP05455 SNRNP70-209ENST00000601065 1757 ntTSL 324.59■■□□□ 1.532e-8■□□□□ 9.6
SSBP05455 SNRNP70-202ENST00000401730 3144 ntTSL 219.09■□□□□ 0.652e-8■□□□□ 9.6
SSBP05455 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)17.78■□□□□ 0.442e-8■□□□□ 9.6
SSBP05455 HSPA9-212ENST00000523929 780 ntTSL 415.73■□□□□ 0.119e-12■□□□□ 9.3
SSBP05455 HSPA9-207ENST00000507097 1796 ntTSL 215.29■□□□□ 0.049e-12■□□□□ 9.3
SSBP05455 HSPA9-210ENST00000508003 582 ntTSL 212.42□□□□□ -0.429e-12■□□□□ 9.3
SSBP05455 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.559e-12■□□□□ 9.3
SSBP05455 HSPA9-202ENST00000501917 275 ntTSL 34.14□□□□□ -1.759e-12■□□□□ 9.3
SSBP05455 SNORD63-201ENST00000384262 68 ntBASIC3.53□□□□□ -1.849e-12■□□□□ 9.3
SSBP05455 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.51■□□□□ 0.559e-13■□□□□ 9.2
SSBP05455 SNHG5-203ENST00000420199 1002 ntTSL 317.14■□□□□ 0.339e-13■□□□□ 9.2
SSBP05455 SNHG5-215ENST00000623163 851 ntTSL 516.02■□□□□ 0.169e-13■□□□□ 9.2
SSBP05455 SNHG5-209ENST00000435947 696 ntTSL 215.35■□□□□ 0.059e-13■□□□□ 9.2
SSBP05455 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC14.43□□□□□ -0.19e-13■□□□□ 9.2
SSBP05455 SNHG5-206ENST00000428833 641 ntTSL 213.52□□□□□ -0.259e-13■□□□□ 9.2
SSBP05455 SNHG5-210ENST00000453754 401 ntTSL 313.47□□□□□ -0.259e-13■□□□□ 9.2
SSBP05455 SNHG5-207ENST00000431043 998 ntTSL 213.26□□□□□ -0.299e-13■□□□□ 9.2
SSBP05455 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.26□□□□□ -0.299e-13■□□□□ 9.2
SSBP05455 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC12.88□□□□□ -0.359e-13■□□□□ 9.2
SSBP05455 SNHG5-202ENST00000414002 430 ntTSL 210.8□□□□□ -0.689e-13■□□□□ 9.2
SSBP05455 SNHG5-220ENST00000624128 672 ntTSL 29.8□□□□□ -0.849e-13■□□□□ 9.2
SSBP05455 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC9.18□□□□□ -0.949e-13■□□□□ 9.2
SSBP05455 SNHG5-217ENST00000623650 886 ntTSL 59.06□□□□□ -0.969e-13■□□□□ 9.2
SSBP05455 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.96□□□□□ -1.149e-13■□□□□ 9.2
SSBP05455 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.28□□□□□ -1.249e-13■□□□□ 9.2
SSBP05455 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.33□□□□□ -1.49e-13■□□□□ 9.2
SSBP05455 SNHG5-216ENST00000623267 374 ntTSL 56.33□□□□□ -1.49e-13■□□□□ 9.2
SSBP05455 SNHG5-205ENST00000427501 680 ntTSL 26.25□□□□□ -1.419e-13■□□□□ 9.2
SSBP05455 SNHG5-208ENST00000433843 388 ntTSL 23.03□□□□□ -1.929e-13■□□□□ 9.2
SSBP05455 CHD8-206ENST00000553870 679 ntTSL 510.32□□□□□ -0.766e-9■□□□□ 8.8
SSBP05455 SNORD9-201ENST00000362566 104 ntBASIC4.01□□□□□ -1.776e-9■□□□□ 8.8
SSBP05455 RPL23A-209ENST00000582736 595 ntTSL 1 (best)16.53■□□□□ 0.244e-8■□□□□ 8.8
SSBP05455 SNORD42B-201ENST00000458893 67 ntBASIC0.36□□□□□ -2.354e-8■□□□□ 8.8
SSBP05455 ACSM3-203ENST00000501740 839 ntTSL 515.79■□□□□ 0.121e-8■□□□□ 8.7
SSBP05455 ACSM3-213ENST00000568235 558 ntTSL 413.59□□□□□ -0.231e-8■□□□□ 8.7
SSBP05455 ACSM3-205ENST00000561584 561 ntTSL 413.11□□□□□ -0.311e-8■□□□□ 8.7
SSBP05455 ACSM3-215ENST00000614721 3311 ntTSL 1 (best)9.83□□□□□ -0.841e-8■□□□□ 8.7
SSBP05455 RPS13-203ENST00000525828 664 ntTSL 219■□□□□ 0.638e-8■□□□□ 8.6
SSBP05455 RPS13-204ENST00000526895 561 ntTSL 315.89■□□□□ 0.138e-8■□□□□ 8.6
SSBP05455 RPS13-209ENST00000533969 355 ntTSL 315.1■□□□□ 0.018e-8■□□□□ 8.6
SSBP05455 RPS13-201ENST00000228140 491 ntTSL 2 BASIC11.56□□□□□ -0.568e-8■□□□□ 8.6
SSBP05455 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.768e-8■□□□□ 8.6
SSBP05455 RPS13-208ENST00000531908 746 ntTSL 27.91□□□□□ -1.148e-8■□□□□ 8.6
SSBP05455 SNORD14B-201ENST00000364533 90 ntBASIC4.48□□□□□ -1.698e-8■□□□□ 8.6
SSBP05455 SNX5-206ENST00000469704 696 ntTSL 329.33■■■□□ 2.292e-32■□□□□ 8.5
SSBP05455 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.862e-32■□□□□ 8.5
SSBP05455 SNX5-214ENST00000490175 2025 ntTSL 1 (best)17.88■□□□□ 0.452e-32■□□□□ 8.5
SSBP05455 SNX5-204ENST00000431277 840 ntTSL 517.67■□□□□ 0.422e-32■□□□□ 8.5
SSBP05455 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.332e-32■□□□□ 8.5
SSBP05455 SNX5-203ENST00000419004 778 ntTSL 516.6■□□□□ 0.252e-32■□□□□ 8.5
SSBP05455 OVOL2-204ENST00000486776 550 ntTSL 315.81■□□□□ 0.122e-32■□□□□ 8.5
SSBP05455 SNX5-207ENST00000474883 695 ntTSL 56.3□□□□□ -1.42e-32■□□□□ 8.5
SSBP05455 SNORD17-201ENST00000390930 237 ntBASIC3.84□□□□□ -1.792e-32■□□□□ 8.5
SSBP05455 GAS5-225ENST00000454813 621 ntTSL 36.78□□□□□ -1.325e-47■□□□□ 8.2
SSBP05455 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.66□□□□□ -1.345e-47■□□□□ 8.2
SSBP05455 GAS5-207ENST00000422207 643 ntTSL 26.16□□□□□ -1.425e-47■□□□□ 8.2
SSBP05455 GAS5-217ENST00000444470 424 ntTSL 26.16□□□□□ -1.425e-47■□□□□ 8.2
SSBP05455 GAS5-212ENST00000434796 575 ntTSL 23.82□□□□□ -1.85e-47■□□□□ 8.2
SSBP05455 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC13.12□□□□□ -0.313e-7■□□□□ 8.1
SSBP05455 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.393e-7■□□□□ 8.1
SSBP05455 PUM1-215ENST00000525948 1103 ntTSL 311.57□□□□□ -0.563e-7■□□□□ 8.1
SSBP05455 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.89□□□□□ -0.833e-7■□□□□ 8.1
SSBP05455 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.873e-7■□□□□ 8.1
SSBP05455 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.32□□□□□ -0.923e-7■□□□□ 8.1
SSBP05455 PUM1-214ENST00000525843 4528 ntTSL 58.71□□□□□ -1.023e-7■□□□□ 8.1
SSBP05455 PUM1-209ENST00000480602 906 ntTSL 58.54□□□□□ -1.043e-7■□□□□ 8.1
SSBP05455 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.173e-7■□□□□ 8.1
SSBP05455 PUM1-218ENST00000526215 586 ntTSL 27.26□□□□□ -1.253e-7■□□□□ 8.1
SSBP05455 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.08□□□□□ -1.283e-7■□□□□ 8.1
Retrieved 72 of 672 protein–RNA pairs in 91.7 ms