RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
RPS3-201ENST00000278572 CCDC180Q9P1Z9 1646 aa32.85■■■□□ 2.85
RPS3-201ENST00000278572 ABCC9O60706 1549 aa32.67■■■□□ 2.82
RPS3-201ENST00000278572 RB1CC1Q8TDY2 1594 aa31.22■■■□□ 2.59
RPS3-201ENST00000278572 NACADO15069 1562 aa31.05■■■□□ 2.56
RPS3-201ENST00000278572 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
RPS3-201ENST00000278572 MYO15BQ96JP2 1530 aa30.73■■■□□ 2.51
RPS3-201ENST00000278572 ZCCHC6Q5VYS8 1495 aaKnown RBP30.51■■■□□ 2.48
RPS3-201ENST00000278572 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
RPS3-201ENST00000278572 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
RPS3-201ENST00000278572 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.46
RPS3-201ENST00000278572 UNC13AQ9UPW8 1703 aa30.32■■■□□ 2.44
RPS3-201ENST00000278572 BICRAQ9NZM4 1560 aa30.23■■■□□ 2.43
RPS3-201ENST00000278572 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
RPS3-201ENST00000278572 SCRIBQ14160 1630 aa29.94■■■□□ 2.38
RPS3-201ENST00000278572 EIF4G1Q04637 1599 aaKnown RBP29.52■■■□□ 2.32
RPS3-201ENST00000278572 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
RPS3-201ENST00000278572 CECR2Q9BXF3 1484 aa29.45■■■□□ 2.31
RPS3-201ENST00000278572 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
RPS3-201ENST00000278572 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
RPS3-201ENST00000278572 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
RPS3-201ENST00000278572 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
RPS3-201ENST00000278572 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
RPS3-201ENST00000278572 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
RPS3-201ENST00000278572 BAZ1BQ9UIG0 1483 aaKnown RBP28.35■■■□□ 2.13
RPS3-201ENST00000278572 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
RPS3-201ENST00000278572 MROH2BQ7Z745 1585 aa28.27■■■□□ 2.12
RPS3-201ENST00000278572 ERCC6Q03468 1493 aa28.26■■■□□ 2.11
RPS3-201ENST00000278572 CUX2O14529 1486 aa28.15■■■□□ 2.1
RPS3-201ENST00000278572 NESP48681 1621 aa28.09■■■□□ 2.09
RPS3-201ENST00000278572 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
RPS3-201ENST00000278572 WIZO95785 1651 aa27.89■■■□□ 2.06
RPS3-201ENST00000278572 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
RPS3-201ENST00000278572 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
RPS3-201ENST00000278572 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
RPS3-201ENST00000278572 RSF1Q96T23 1441 aaPredicted RBP27.79■■■□□ 2.04
RPS3-201ENST00000278572 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
RPS3-201ENST00000278572 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
RPS3-201ENST00000278572 TOP2AP11388 1531 aaKnown RBP27.66■■■□□ 2.02
RPS3-201ENST00000278572 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
RPS3-201ENST00000278572 CFTRP13569 1480 aa27.53■■■□□ 2
RPS3-201ENST00000278572 CEP164Q9UPV0 1460 aa27.52■■■□□ 2
RPS3-201ENST00000278572 WDR62O43379 1518 aa27.5■■□□□ 1.99
RPS3-201ENST00000278572 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
RPS3-201ENST00000278572 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
RPS3-201ENST00000278572 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
RPS3-201ENST00000278572 PRDM2Q13029 1718 aa27.15■■□□□ 1.94
RPS3-201ENST00000278572 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
RPS3-201ENST00000278572 IFT140Q96RY7 1462 aa26.98■■□□□ 1.91
RPS3-201ENST00000278572 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
RPS3-201ENST00000278572 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
RPS3-201ENST00000278572 OSCARQ8IYS5 282 aa26.86■■□□□ 1.89
RPS3-201ENST00000278572 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
RPS3-201ENST00000278572 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
RPS3-201ENST00000278572 TRIM41Q8WV44 630 aa26.72■■□□□ 1.87
RPS3-201ENST00000278572 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
RPS3-201ENST00000278572 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
RPS3-201ENST00000278572 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
RPS3-201ENST00000278572 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.851e-7■■■■■ 28
RPS3-201ENST00000278572 SOGA1O94964 1423 aa26.6■■□□□ 1.85
RPS3-201ENST00000278572 RAD54L2Q9Y4B4 1467 aa26.59■■□□□ 1.85
RPS3-201ENST00000278572 FGD5Q6ZNL6 1462 aa26.58■■□□□ 1.85
RPS3-201ENST00000278572 CUX1P39880 1505 aa26.55■■□□□ 1.84
RPS3-201ENST00000278572 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
RPS3-201ENST00000278572 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
RPS3-201ENST00000278572 FBLN2P98095 1184 aa26.44■■□□□ 1.82
RPS3-201ENST00000278572 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
RPS3-201ENST00000278572 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
RPS3-201ENST00000278572 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
RPS3-201ENST00000278572 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
RPS3-201ENST00000278572 CHD1O14646 1710 aa26.4■■□□□ 1.82
RPS3-201ENST00000278572 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
RPS3-201ENST00000278572 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
RPS3-201ENST00000278572 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
RPS3-201ENST00000278572 CHMP7Q8WUX9 453 aaPredicted RBP26.31■■□□□ 1.8
RPS3-201ENST00000278572 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
RPS3-201ENST00000278572 GAPVD1Q14C86 1478 aa26.29■■□□□ 1.8
RPS3-201ENST00000278572 SYNJ2O15056 1496 aa26.27■■□□□ 1.8
RPS3-201ENST00000278572 WRNQ14191 1432 aaPredicted RBP eCLIP26.26■■□□□ 1.798e-7■□□□□ 9.9
RPS3-201ENST00000278572 SYNJ1O43426 1573 aa26.23■■□□□ 1.79
RPS3-201ENST00000278572 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
RPS3-201ENST00000278572 CYB5RLQ6IPT4 315 aa26.2■■□□□ 1.78
RPS3-201ENST00000278572 TOP2BQ02880 1626 aa26.2■■□□□ 1.78
RPS3-201ENST00000278572 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
RPS3-201ENST00000278572 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
RPS3-201ENST00000278572 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
RPS3-201ENST00000278572 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
RPS3-201ENST00000278572 GRIN2AQ12879 1464 aa26.03■■□□□ 1.76
RPS3-201ENST00000278572 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
RPS3-201ENST00000278572 FHAD1B1AJZ9 1412 aa25.99■■□□□ 1.75
RPS3-201ENST00000278572 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
RPS3-201ENST00000278572 NUP160Q12769 1436 aa25.94■■□□□ 1.74
RPS3-201ENST00000278572 CEP170Q5SW79 1584 aa25.88■■□□□ 1.73
RPS3-201ENST00000278572 TRHP20396 242 aaPredicted RBP25.87■■□□□ 1.73
RPS3-201ENST00000278572 KIF27Q86VH2 1401 aa25.76■■□□□ 1.71
RPS3-201ENST00000278572 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
RPS3-201ENST00000278572 ERCC6L2Q5T890 1561 aa25.74■■□□□ 1.71
RPS3-201ENST00000278572 IGF1RP08069 1367 aa25.67■■□□□ 1.7
RPS3-201ENST00000278572 PRG4Q92954 1404 aaPredicted RBP25.66■■□□□ 1.7
RPS3-201ENST00000278572 JPH4Q96JJ6 628 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms