RNA–Protein interactions for RNA: ENST00000528847.1

RPS3-211, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-211ENST00000528847 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
RPS3-211ENST00000528847 ABCC9O60706 1549 aa23.98■■□□□ 1.43
RPS3-211ENST00000528847 CCDC180Q9P1Z9 1646 aa23.47■■□□□ 1.35
RPS3-211ENST00000528847 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
RPS3-211ENST00000528847 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
RPS3-211ENST00000528847 NACADO15069 1562 aa22.29■■□□□ 1.16
RPS3-211ENST00000528847 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.16
RPS3-211ENST00000528847 DCAF8L2P0C7V8 631 aa22.2■■□□□ 1.14
RPS3-211ENST00000528847 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
RPS3-211ENST00000528847 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
RPS3-211ENST00000528847 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
RPS3-211ENST00000528847 CC2D2AQ9P2K1 1620 aa21.62■■□□□ 1.05
RPS3-211ENST00000528847 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
RPS3-211ENST00000528847 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
RPS3-211ENST00000528847 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
RPS3-211ENST00000528847 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
RPS3-211ENST00000528847 SCRIBQ14160 1630 aa21.41■■□□□ 1.02
RPS3-211ENST00000528847 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
RPS3-211ENST00000528847 DNAJC5Q9H3Z4 198 aa21.34■■□□□ 1.01
RPS3-211ENST00000528847 CUX2O14529 1486 aa20.76■□□□□ 0.91
RPS3-211ENST00000528847 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
RPS3-211ENST00000528847 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
RPS3-211ENST00000528847 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
RPS3-211ENST00000528847 NESP48681 1621 aa20.5■□□□□ 0.87
RPS3-211ENST00000528847 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
RPS3-211ENST00000528847 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
RPS3-211ENST00000528847 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
RPS3-211ENST00000528847 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
RPS3-211ENST00000528847 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
RPS3-211ENST00000528847 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
RPS3-211ENST00000528847 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
RPS3-211ENST00000528847 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
RPS3-211ENST00000528847 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
RPS3-211ENST00000528847 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
RPS3-211ENST00000528847 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
RPS3-211ENST00000528847 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
RPS3-211ENST00000528847 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
RPS3-211ENST00000528847 MROH2BQ7Z745 1585 aa20.06■□□□□ 0.8
RPS3-211ENST00000528847 CADPSQ9ULU8 1353 aa19.97■□□□□ 0.79
RPS3-211ENST00000528847 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
RPS3-211ENST00000528847 WDR62O43379 1518 aa19.92■□□□□ 0.78
RPS3-211ENST00000528847 WIZO95785 1651 aa19.81■□□□□ 0.76
RPS3-211ENST00000528847 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
RPS3-211ENST00000528847 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
RPS3-211ENST00000528847 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
RPS3-211ENST00000528847 CFTRP13569 1480 aa19.65■□□□□ 0.74
RPS3-211ENST00000528847 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
RPS3-211ENST00000528847 RIMBP3CA6NJZ7 1639 aa19.61■□□□□ 0.73
RPS3-211ENST00000528847 RIMBP3BA6NNM3 1639 aa19.61■□□□□ 0.73
RPS3-211ENST00000528847 RIMBP3Q9UFD9 1639 aa19.61■□□□□ 0.73
RPS3-211ENST00000528847 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
RPS3-211ENST00000528847 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
RPS3-211ENST00000528847 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
RPS3-211ENST00000528847 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
RPS3-211ENST00000528847 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
RPS3-211ENST00000528847 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
RPS3-211ENST00000528847 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
RPS3-211ENST00000528847 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
RPS3-211ENST00000528847 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
RPS3-211ENST00000528847 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
RPS3-211ENST00000528847 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
RPS3-211ENST00000528847 CHD1O14646 1710 aa19.29■□□□□ 0.68
RPS3-211ENST00000528847 AQRO60306 1485 aaKnown RBP eCLIP19.26■□□□□ 0.678e-8■■■■■ 30.4
RPS3-211ENST00000528847 ARAP1Q96P48 1450 aa19.26■□□□□ 0.67
RPS3-211ENST00000528847 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
RPS3-211ENST00000528847 FBLN2P98095 1184 aa19.21■□□□□ 0.67
RPS3-211ENST00000528847 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
RPS3-211ENST00000528847 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
RPS3-211ENST00000528847 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
RPS3-211ENST00000528847 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
RPS3-211ENST00000528847 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
RPS3-211ENST00000528847 SOGA1O94964 1423 aa19.02■□□□□ 0.64
RPS3-211ENST00000528847 CLASP1Q7Z460 1538 aa19.02■□□□□ 0.64
RPS3-211ENST00000528847 SNAPC4Q5SXM2 1469 aa19■□□□□ 0.63
RPS3-211ENST00000528847 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
RPS3-211ENST00000528847 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
RPS3-211ENST00000528847 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
RPS3-211ENST00000528847 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
RPS3-211ENST00000528847 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
RPS3-211ENST00000528847 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
RPS3-211ENST00000528847 CUX1P39880 1505 aa18.85■□□□□ 0.61
RPS3-211ENST00000528847 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
RPS3-211ENST00000528847 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
RPS3-211ENST00000528847 PBRM1Q86U86 1689 aa18.8■□□□□ 0.6
RPS3-211ENST00000528847 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
RPS3-211ENST00000528847 ABCA5Q8WWZ7 1642 aa18.68■□□□□ 0.58
RPS3-211ENST00000528847 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
RPS3-211ENST00000528847 CEP170Q5SW79 1584 aa18.64■□□□□ 0.58
RPS3-211ENST00000528847 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
RPS3-211ENST00000528847 KIF13AQ9H1H9 1805 aa18.63■□□□□ 0.57
RPS3-211ENST00000528847 NUP160Q12769 1436 aa18.59■□□□□ 0.57
RPS3-211ENST00000528847 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
RPS3-211ENST00000528847 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
RPS3-211ENST00000528847 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.558e-44■□□□□ 10.4
RPS3-211ENST00000528847 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
RPS3-211ENST00000528847 PRG4Q92954 1404 aaPredicted RBP18.47■□□□□ 0.55
RPS3-211ENST00000528847 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
RPS3-211ENST00000528847 JPH4Q96JJ6 628 aa18.44■□□□□ 0.54
RPS3-211ENST00000528847 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
RPS3-211ENST00000528847 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms