RNA–Protein interactions for RNA: ENST00000507051.1

SEC31A-220, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 4

Gene SEC31A, Length 458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-220ENST00000507051 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
SEC31A-220ENST00000507051 ABCC9O60706 1549 aa21.45■■□□□ 1.02
SEC31A-220ENST00000507051 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
SEC31A-220ENST00000507051 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
SEC31A-220ENST00000507051 NACADO15069 1562 aa20.22■□□□□ 0.83
SEC31A-220ENST00000507051 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
SEC31A-220ENST00000507051 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
SEC31A-220ENST00000507051 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
SEC31A-220ENST00000507051 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
SEC31A-220ENST00000507051 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
SEC31A-220ENST00000507051 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
SEC31A-220ENST00000507051 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
SEC31A-220ENST00000507051 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
SEC31A-220ENST00000507051 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
SEC31A-220ENST00000507051 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
SEC31A-220ENST00000507051 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
SEC31A-220ENST00000507051 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
SEC31A-220ENST00000507051 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
SEC31A-220ENST00000507051 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
SEC31A-220ENST00000507051 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
SEC31A-220ENST00000507051 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
SEC31A-220ENST00000507051 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
SEC31A-220ENST00000507051 HMGXB3Q12766 1538 aa18.55■□□□□ 0.56
SEC31A-220ENST00000507051 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
SEC31A-220ENST00000507051 CUX2O14529 1486 aa18.53■□□□□ 0.56
SEC31A-220ENST00000507051 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
SEC31A-220ENST00000507051 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
SEC31A-220ENST00000507051 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
SEC31A-220ENST00000507051 NESP48681 1621 aa18.42■□□□□ 0.54
SEC31A-220ENST00000507051 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.54
SEC31A-220ENST00000507051 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
SEC31A-220ENST00000507051 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
SEC31A-220ENST00000507051 LAMC3Q9Y6N6 1575 aa18.28■□□□□ 0.52
SEC31A-220ENST00000507051 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
SEC31A-220ENST00000507051 WIZO95785 1651 aa18.12■□□□□ 0.49
SEC31A-220ENST00000507051 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
SEC31A-220ENST00000507051 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
SEC31A-220ENST00000507051 WDR62O43379 1518 aa18.01■□□□□ 0.47
SEC31A-220ENST00000507051 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
SEC31A-220ENST00000507051 CEP164Q9UPV0 1460 aa17.91■□□□□ 0.46
SEC31A-220ENST00000507051 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
SEC31A-220ENST00000507051 RSF1Q96T23 1441 aaPredicted RBP17.87■□□□□ 0.45
SEC31A-220ENST00000507051 CFTRP13569 1480 aa17.87■□□□□ 0.45
SEC31A-220ENST00000507051 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
SEC31A-220ENST00000507051 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
SEC31A-220ENST00000507051 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
SEC31A-220ENST00000507051 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
SEC31A-220ENST00000507051 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
SEC31A-220ENST00000507051 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
SEC31A-220ENST00000507051 ZNF608Q9ULD9 1512 aaPredicted RBP17.56■□□□□ 0.4
SEC31A-220ENST00000507051 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
SEC31A-220ENST00000507051 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
SEC31A-220ENST00000507051 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
SEC31A-220ENST00000507051 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
SEC31A-220ENST00000507051 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
SEC31A-220ENST00000507051 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
SEC31A-220ENST00000507051 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
SEC31A-220ENST00000507051 TARBP1Q13395 1621 aaKnown RBP17.45■□□□□ 0.38
SEC31A-220ENST00000507051 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
SEC31A-220ENST00000507051 CHD1O14646 1710 aa17.41■□□□□ 0.38
SEC31A-220ENST00000507051 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
SEC31A-220ENST00000507051 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
SEC31A-220ENST00000507051 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.372e-8■■■■■ 30.5
SEC31A-220ENST00000507051 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
SEC31A-220ENST00000507051 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
SEC31A-220ENST00000507051 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
SEC31A-220ENST00000507051 CUX1P39880 1505 aa17.23■□□□□ 0.35
SEC31A-220ENST00000507051 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
SEC31A-220ENST00000507051 SOGA1O94964 1423 aa17.21■□□□□ 0.35
SEC31A-220ENST00000507051 TDRD9Q8NDG6 1382 aaKnown RBP17.2■□□□□ 0.34
SEC31A-220ENST00000507051 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
SEC31A-220ENST00000507051 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
SEC31A-220ENST00000507051 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
SEC31A-220ENST00000507051 FBLN2P98095 1184 aa17.16■□□□□ 0.34
SEC31A-220ENST00000507051 PBRM1Q86U86 1689 aa17.14■□□□□ 0.33
SEC31A-220ENST00000507051 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
SEC31A-220ENST00000507051 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
SEC31A-220ENST00000507051 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
SEC31A-220ENST00000507051 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
SEC31A-220ENST00000507051 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
SEC31A-220ENST00000507051 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
SEC31A-220ENST00000507051 GAPVD1Q14C86 1478 aa17.04■□□□□ 0.32
SEC31A-220ENST00000507051 ABCA10Q8WWZ4 1543 aa17.03■□□□□ 0.32
SEC31A-220ENST00000507051 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
SEC31A-220ENST00000507051 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
SEC31A-220ENST00000507051 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
SEC31A-220ENST00000507051 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
SEC31A-220ENST00000507051 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
SEC31A-220ENST00000507051 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
SEC31A-220ENST00000507051 ERCC6L2Q5T890 1561 aa16.91■□□□□ 0.3
SEC31A-220ENST00000507051 CEP170Q5SW79 1584 aa16.9■□□□□ 0.3
SEC31A-220ENST00000507051 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
SEC31A-220ENST00000507051 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
SEC31A-220ENST00000507051 NUP160Q12769 1436 aa16.87■□□□□ 0.29
SEC31A-220ENST00000507051 SHROOM2Q13796 1616 aa16.86■□□□□ 0.29
SEC31A-220ENST00000507051 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
SEC31A-220ENST00000507051 FHAD1B1AJZ9 1412 aa16.8■□□□□ 0.28
SEC31A-220ENST00000507051 KIF13AQ9H1H9 1805 aa16.72■□□□□ 0.27
SEC31A-220ENST00000507051 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
SEC31A-220ENST00000507051 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms